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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR011068
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 19 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.494s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0113539.1
n.a. Poly(A) polymerase 1 isoform 3 [Theobroma cacao] gi|508773894|gb|EOY21150.1| chr0 49627747 49628592 -
2 domain predictions
3 GO terms
Lj0g3v0163859.1
n.a. PREDICTED: poly(A) polymerase-like [Cicer arietinum] gi|502163575|ref|XP_004512881.1| chr0 77488341 77495665 -
2 domain predictions
3 GO terms
Lj0g3v0326369.1
n.a. PREDICTED: poly(A) polymerase-like [Cicer arietinum] gi|502137984|ref|XP_004503248.1| chr0 170605832 170608074 +
2 domain predictions
3 GO terms
Lj1g3v2095480.1
n.a. PREDICTED: poly(A) polymerase-like [Glycine max] gi|356515639|ref|XP_003526506.1| chr1 24758391 24765206 -
2 domain predictions
3 GO terms
Lj3g3v2318240.1
n.a. PREDICTED: poly(A) polymerase-like isoform X3 [Cicer arietinum] gi|502156117|ref|XP_004510318.1| chr3 28809112 28812543 -
2 domain predictions
3 GO terms
Lj3g3v2318240.2
n.a. PREDICTED: poly(A) polymerase-like [Glycine max] gi|356528904|ref|XP_003533037.1| chr3 28809112 28815752 -
2 domain predictions
3 GO terms
Lj3g3v2318240.3
n.a. PREDICTED: poly(A) polymerase-like isoform X3 [Cicer arietinum] gi|502156117|ref|XP_004510318.1| chr3 28809112 28815752 -
2 domain predictions
3 GO terms
Lj3g3v2318240.4
n.a. PREDICTED: poly(A) polymerase-like isoform X3 [Cicer arietinum] gi|502156117|ref|XP_004510318.1| chr3 28809112 28815752 -
2 domain predictions
3 GO terms
Lj4g3v3114000.1
n.a. Poly(A) polymerase [Medicago truncatula] gi|357521515|ref|XP_003631046.1| chr4 41854716 41857079 -
2 domain predictions
3 GO terms
Lj4g3v3114000.2
n.a. Poly(A) polymerase [Medicago truncatula] gi|357521515|ref|XP_003631046.1| chr4 41854716 41860165 -
2 domain predictions
3 GO terms
Lj5g3v0069830.1
n.a. Poly(A) polymerase [Medicago truncatula] gi|357521515|ref|XP_003631046.1| chr5 349835 355638 +
2 domain predictions
3 GO terms
LotjaGi1g1v0409600.1
n.a. Poly(A) polymerase-like protein; TAIR: AT4G32850.5 nuclear poly(a) polymerase; Swiss-Prot: sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4; TrEMBL-Plants: tr|A0A072V3Z3|A0A072V3Z3_MEDTR Poly(A) polymerase-like protein; Found in the gene: LotjaGi1g1v0409600 LjG1.1_chr1 90010422 90021302 -
2 domain predictions
3 GO terms
LotjaGi1g1v0409600.2
n.a. Poly(A) polymerase-like protein; TAIR: AT4G32850.2 nuclear poly(a) polymerase; Swiss-Prot: sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4; TrEMBL-Plants: tr|I1K9H4|I1K9H4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0409600 LjG1.1_chr1 90010422 90021302 -
2 domain predictions
3 GO terms
LotjaGi2g1v0201600.1
n.a. Poly(A) polymerase; TAIR: AT1G17980.1 poly(A) polymerase 1; Swiss-Prot: sp|Q9LMT2|PAPS1_ARATH Nuclear poly(A) polymerase 1; TrEMBL-Plants: tr|I1L486|I1L486_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0201600 LjG1.1_chr2 64022356 64030578 +
2 domain predictions
3 GO terms
LotjaGi3g1v0371900.1
n.a. Poly(A) polymerase; TAIR: AT4G32850.10 nuclear poly(a) polymerase; Swiss-Prot: sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4; TrEMBL-Plants: tr|A0A151SH17|A0A151SH17_CAJCA Poly(A) polymerase; Found in the gene: LotjaGi3g1v0371900 LjG1.1_chr3 76192295 76199440 -
2 domain predictions
3 GO terms
LotjaGi3g1v0371900.2
n.a. Poly(A) polymerase; TAIR: AT4G32850.10 nuclear poly(a) polymerase; Swiss-Prot: sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4; TrEMBL-Plants: tr|A0A151SH17|A0A151SH17_CAJCA Poly(A) polymerase; Found in the gene: LotjaGi3g1v0371900 LjG1.1_chr3 76192295 76199440 -
2 domain predictions
3 GO terms
LotjaGi3g1v0371900.3
n.a. Poly(A) polymerase; TAIR: AT4G32850.5 nuclear poly(a) polymerase; Swiss-Prot: sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4; TrEMBL-Plants: tr|A0A151SH17|A0A151SH17_CAJCA Poly(A) polymerase; Found in the gene: LotjaGi3g1v0371900 LjG1.1_chr3 76192789 76199311 -
2 domain predictions
3 GO terms
LotjaGi4g1v0447300_LC.1
n.a. Poly(A) polymerase; TAIR: AT1G17980.1 poly(A) polymerase 1; Swiss-Prot: sp|Q9LMT2|PAPS1_ARATH Nuclear poly(A) polymerase 1; TrEMBL-Plants: tr|A0A061FVR9|A0A061FVR9_THECC Poly(A) polymerase 1 isoform 1; Found in the gene: LotjaGi4g1v0447300_LC LjG1.1_chr4 81967826 81974424 -
2 domain predictions
3 GO terms
LotjaGi6g1v0261000.1
n.a. Poly(A) polymerase; TAIR: AT3G06560.1 poly(A) polymerase 3; Swiss-Prot: sp|Q56XM9|PAPS3_ARATH Nuclear poly(A) polymerase 3; TrEMBL-Plants: tr|A0A1J7ILW7|A0A1J7ILW7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0261000 LjG1.1_chr6 57359910 57365090 -
2 domain predictions
3 GO terms