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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0201600 |
| Transcript ID | LotjaGi2g1v0201600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Poly(A) polymerase; TAIR: AT1G17980.1 poly(A) polymerase 1; Swiss-Prot: sp|Q9LMT2|PAPS1_ARATH Nuclear poly(A) polymerase 1; TrEMBL-Plants: tr|I1L486|I1L486_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0201600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:64022356..64030578) extracted from Lotus japonicus Gifu genome v1.2.
TGTATACTCAGTTTTTTATGATTAATATATTGAGCTTACCTAAAAAAAACTATGTTTTATATTGAGCATGGTCTAATTTT AGATGATCACTATATGCATATTTTACCTATTTTTTCCCCTTTCTTTCTTCTACCTCATTGTCCTCACTCCTCAAAGGCGT TTCATCAAGCTGTTGCAACCAAAAGCCCTATATCACGCTTTTCCTTCCTCTGCGTAAGCACTCCTCTCTCTCTCTCTCTC TCTCTCTCAGCAATCTTATCTTCAATTTTGTCGTCACTTTTCCTCAATTTCATCAATTAATTCATTGAATTTTGTATAAA TTCTCAGTTACATCGCAAAAGGTGCTACACCCTCGAGAATTTTCATCAAGTTGAAGCCTTTCCCAGTTCTGATCGCATGG CACAATCAATTTTCATCTGGGTCTCATCGTGATTGCTCAAAGCTCGCTGATTTAGTCCTCTAGGGTTGCAGTTTTATCTG TACTGTTTCTTTGTTCCTATTTTGCAATGAAATTGTTCTGGGTCGCTTTGTAATTGCTTACCCTTTTGTTCTTTCATGAT TTAATGCTCAAAGTTCATAGCTTTGAACGGTTTCAATCAATCAACAATGATCATCGCTTAGTTATAGTTTTTTTTTTCTT TCTTCCTTTTCTGTTTCATCTTATTTTTATTTGAGTTTATTGGGAAAAAAAAGTGAAGAATCATCATAAACTGATAATTC TCAAAAAAGAGATCATACTGGTACTAAAATTAGAAAAAAAAAAGGAAAAAAAAAAGTGTATCAATTGTTTGTTATGGCTA TCCCTGGATTGAGCAATCAAAATAGTGGGCAGCAAAGATTAGGCATAACTGAGCCTATTTCATTGGCTGGACCAACTGAG TGTGATGTGATCAAGACCCGCGGACTCGAGAAGGTTTTGTTTGTGCTTACTGTAAATTCAATGTTTTAGAGATTTTTTTT TTTGTAAATGTTGCTTTGTGCTGAATTTGGATTCTGGGTGTTTAGTACTTGCAAGGTGCTGGATTGTATGAGAGTCAGCA GGAGGCTGTGGGTAGGGAGGAAGTTCTTGGCAGGCTAGACCAGGTTGAATTTGTTTATTCTTCTATGCAATTTCATTTCT TCTATCTTGGAAATGTAGACCTGGAATGGGGAGTGGCTCCCATTACCCCATAATGTTATCCACAATTTTAGTTTAGAAAT GCAATGGAGATTGCTATGAATTTGTTTGTTTTGATTGTGCTGTTGTAATGTGAATTAGATTGTGAAGAATTGGATTAAGA TTGTTAGCCGTGCCAAGGGATTCAATGAACAACTAGTGCAAGAAGCAAATGCAAAGATTTTCACCTTTGGCTCCTATAGG CTTGGGGTATGTAGTTATTCTTATCTTCCAAGTATTTCTCATATTGCCTCTTATATGATATTTTCTTTACTATACTGTAT TTATTTCTTATTTCTAATAGAACCTCATAATGTTCAAAAGAGTGGTTACGTTTTATTTTCTTAACATATGAAGTTGTGAA ATGTCACCAGACATTTTGTTAAAACTCATTTTTATGTGTTTGGACAATGTTGTCCAGATTGGGTTCTTACATAGGATCAG GAGGGAAGATCCTACCAAAAAATGTAAAAATTATAATTATACATGTACAACTACATATCCATAGAAAAGAACCTCTAAAT CACATCATGAAAGTGAACTTAAAAGCATAGGACCTTATACAACTTATAATCAGTCACATAAGTCATAACATATGTTTTTC ATAAGATTTTAAGTTCAGCAAAGTAGAGATAGAGCAAAGCATACAGCATGAGCAGATAATGAGGAAGAAACAGCAGGGCG CAAACACAGAGAGACAGAACAAAGCTAACAAAGAAGAAGACTGCAGGGCACACAGACAGTGAAGACGAACAGCAGAGCTT CGATCTGAATAATGAGTTTTCAATGATTTGGGTTTCCTGTGTAGTTAGGGACTTTGGATTTTGATCTGAATGATGGGGTA AAATTTTGGAAGAATCGGGTAACATTTGGGGTGGTTTCCTGAAACTGTGATGTGAACTGAACCCGGAAACCCATTGAAGA TGGGATCCGACCGGGTTGCCGATCCAGCTCGGATTGCCTATCTGGCTGTGATCTCAATGATTCACGATCTTGGCTGCAAT CCTGATCAGAGAAGCCTCTTGAGCACGTAGGATTGTGCGATATTACGATTAAGATTGTAATCTTGACAACAGTGCATGTC AGAATTTTAAATGTATTTTGAATTTGTTGATGGACCAGAGAATAAGTTGCTTGACTGTTGGTCTTTTTTGTCTGCTTTTC CTGAAGACTGTTTTCTGTTGCAGTTTTGATCATGTAACTTTTGTGATGACATGTTTATCTTCATTTTTGTTATTTTGTTA CAATGCACTTGGCTGGTGGATTGATGAAAAATGATAAATTCAATAATCCTTGTTTATTTCACAATCAAGATTGATGTTGT AAATAAACTTCTGAAAGAAACCACTAGCTTTTAGCCTACAATGAGGTGAAAAACAAGTCTGTCGTACATGGCATACAATG GCTGAAAATTTAATTCAAAGTCTTTGCTTTTACATTCCAGACAAAGATGCTAACACTAGCAAAACATAATCTGTTACACC GTTTCATTGTGATTTTTTTTTCCATCCTTATATGTCCCAAAATTTTTATAATGGATAGAGAGCAAGTCTTCTGATGTTGT GGGTAAGATGCAATACTTTCCAGAATGAAAGACAGAGAACTGATGAAACAATATGAAACTAGGATCAAAATCTGAGATTA ATGGCTCTGATCCAATACATTTATTGCAATGTCTTTTTGGTTCCTTTGTTATTTTACCAAAAATTTCCCTCCAAATCTTG TAGGTGCATGGCCCTGGAGCTGATATTGATACTCTTTGTGTGGGACCTAGACATGCAACCAGACATGTATGATAGCTGTT GCTATTTTATGGTGCAAATATCGGTTTTTAGCTTTTAGATTATTTCTCCTGTCACCTAAAACTGTTATTTTTATTGGCCT CAGGAAGATTTCTTTGGTGAGCTAGGTAAGATGCTATTCGAGTCGCAGGAAGTAACAGAATTTCACCCTGTGCCTGATGC ACATGTCCCTGTGATGAAATTCAAATTCAATGGAGTTTCTGTAGATCTCCTTTATGCAAGATTGTCATTGTGGGTTATTC CTGAAGTAAGTTATTTATGCACATATAGTTAACTGTTTTGGACACAGTCTTGTTACTTTTATTCCTGTCTATGTCCTCTC TGTATCTACTTCCCAAGAGTTGTGGATGTGGTTTTCTGGTGAATTTGATAGCAGTCTGAATTGAAGGAAATTATGGGCCT GTTTGTGCTTTTTGAAAAAGAAAAAGTATATTTTTTTGATTATTTCTCAGAAAATTATAATAATTGTGTAAAATTTTCAG AAAAAACCCGTTTTAGTGCTTTTTCTCAAAAGTTAATAATTGCTTCTGAAAAAAGCTGTAGAAAAATATTATAGAATAAA TTTTCTAAACCTGAACCAAAAGGAGCTATATGAAAGATCCGTAGTGTATAAATGGCACTTTGACACCATCCTGCTCTACT CACAGAACTATTACTGGATGAAAGATTAGGTCCTTGGTCTGTTAATCATTAAACATTCAGCTCTTCCAAGATCAAATCTT CTATAGACGTGACATTGATCTTCCTCCCCCATGTGTTTTATTCAGGCTTCATGAATCTCAAGTGTAAATTATATCTACTT TTTATATAGCATTTAGCGAAAATGATTTTCTTTTTGGGCAGGACTTAGATATATCACAGGAATCAGTATTACAAAATGTA GATGAACAAACTGTTCTCAGTCTTAATGGTTGCAGAGTAACTGATCAAGTCCTGCGTCTAGTCCCAAATATTCAGGTGGT GGATATAAAATTGTCACATATTATTTTCATGGTTAGCTCTTTTGCAGCATTCTCATTGCTGATTTATTCTGTTTCTGAAT TACAGAATTTTCGCACAACATTGAGATGCATGAGATTTTGGGCAAAGCGTCGTGGTGTTTATTCAAATGTATGGCATAAC TCCCAAATAGCATGGTTTATTCACTGTCATGAACTTGTTCATTATTATGTTATTTTGATTTTCCTAATGCACTGTCTTGC TATTTCATGGGCAGGTTGCGGGTTTTCTTGGTGGTATAAACCTGGCATTGCTTGTTGCTCGAATATGCCAGCTATATCCT AACGCACTGCCTAATATGTTAGTGTCTCGATTCTTTAGGGTATATACTCAATGGCGATGGCCAAACCCAGTCATGCTTTG TGGTATTGAAGAAGGATCTCTTGGACTACAGATTTGGGATCCTAGAAGAAATCCCAAGGATAAATTTCATCTAATGCCTA TAATTACTCCTGCTTATCCTTGCATGAACTCTACTTACAATGTGACAGCAAGTACACTGCGTATTATGTCAGAGGAGTTT CAGAGGGGAAGTGAAATATGTGAGGTATGATTTGATGATTTAAGAAACGTTTTCTTTTGACATGTTGATTTCGTAGGACA TACATACATACATCTGTTGTTGTCTTTTGATAGGATTGCTGACCCCACCTAATGGAAAACGGCTTTGGTTGTTGATTTTG TTGTTTGTTGCATAGTTATGTTATCTGCACTTTGTTCTTCCTGTGATTCTATAAACTTCAATGCCCAAAACCTGGCCTAC AAGCCAAGCATTTTTGAGTGTTTGATGAAAGCAAGTTTGGGTAATACCAGTGTTGTCAATAGCGCGCGATCGCGGCGCAA TAGCGGCGCTGCGTGGCGGAGCGGTGGTTGACCGCGACGCTGGAGGTCGTTGCGGCGCGGAAATCGCGTCGCGGCGGTAG CGGCCGCAATCGCGGCCAAAATCGCGTCTGAAGCGGCGCTATTGCGGCGCGAGGAAGAAAGAAGGAGGAAAAACCCTAAT CTTCAGGGTGAAAACCCCAAGTTGCCCCCATATTTAAAAATTAGGTTAAACTTTTTAAGGGCAATTTGGGGTTTTCGTTT CTTTAGTGAAACGCAGTGTTTCAAGTGAGGATAAAAACCCTACTGTTTAGGGGGAAAACCCCAAAATGCCCTCAGATTTA AACATAATTTTAAACTTTTTAAGGGCATTCTGGGGCTTTCACAGTTTCTTTAAATGGAACGCTGCGTTTTACTCTTCTTC AACCTTGCTTCTGCATTCTCCCTCTGTTTTTCACAATGAAAACAGAGATCTGTTGCTGCCTTCTTCCTCCTTCCTCCTTC CTCCTCCTCCTCCTTCTTCCTCCTCCTCCTTCAGCGTAGCGGCCATAGCGCTACACGCTATAGCGCTATTGCGGATTTTG GGCTCGCCGCTACGCGACGCTATCCGCCATTAACAACACTGGGTAATACCAGGTAATAGCTGGGTTAATGTTTCTACCAA AGTGAAATACTTTTATCAGGATAGAAGTTTTCATAATAGGATTGATCATTAATCTGCGTAAATAAGATAAGTTTGGTGAT TCGTTTGTTTAGTGTTCAATTATGGGCTGAGTAACACATCAAGGAAGCATCAATTTTGTGGGGTGGTTTATTTTCTTAAT TTTGACAAATTCATCTATTGTTTTGTGAATTTTAAGCTTTTATATAATTACATTTTATTCTTATGGTGATATTTTGGTTG TTTAAATTTTATATTTCTGGTATCTGTAGGCTATGGAGGGTAGCAAGGCTGATTGGGATTCTCTTTTTGAGCCATATCCC TTTTTTGAATCTTACAAGAATTATCTACAGATAGACATTGCAGCAGAGAATGCAGATGATCTTAGATCATGGAAAGGATG GGTTGAGTCCCGTCTCCGCCAGTTGACATTGAAGGTGTAACACTGTATAATTTTTTGTTTGTTATTACTTGTTGCATTTT ATTTTATTTCTTACTTTCCCTTTTCATTTTTGTGTGTGGGTGTGTATCTGCGGGTAAGGGTTGGATGCAACTTTGTATTT TCGTTGGTACATCATATATAACCTAATTTGGTTGTCCTTTAAACTTCTAGATTGAGAGGCACACATATGGTGTTCTTCAG TGTCATCCATATCCTGGTGAATTTTCAGACAAATCTAGACCTTTCCACTGCTGTTACTTTATGGGTCTGCAGCGTAAGCA AGGTGTTCCAGTGAATGAAGGTGAACAATTTGACATAAGGCTAACTGTTGAAGAATTTAAGCTTGCTGTCAATTCTTACA GTACTTGGAAACCTGGAATGGATATCCATGTCTCCCATGTTAAGCGCCGTAATATACCAAGCTTCATATTTCCTGGTGGT GTCCGACCTTCCCTCCCATCTAATAGACAAAGTTCCAAATTAAGGGATTCTGGACTTGGTCAAGCAGAAAAGTCTCAAGG AGTTAAGGTTGACTTTGTAGCAAATGATATGAAGAAGAGAAAGCGACCAGAGGAGAACTTGGATAGTAATAACTCGAGGA ACTCAATGTCCTTTGTATCTTTACCTCCACCCAACGGCGATGTTCACAAAGATATAACTCCTATTAGCGCCTCTGGTTCT TGTTCTATGAAATTTGATGACTCAGAAGTCAGCAGTATAGGTGCCCCAAAAAGTGAGAAACCTTCTGGGAAATCTATAGG GGAGATTCCTTCTGGGGATAGTGAGACCAATGGATTGGTAACAGGCAACCAACAAGAAAACCCTATACTTACTGCTCCTG ATACATCTAATTCTAAAGAAGAGGAAAAACTGGCCATTGAGAAGATCATGTCCGGTCCCTATGATGGGCGTCAGGCCTTG GCAGAACCGGATGAACTTGAAGATGATAATATGTATCCAAATCAAGTCAAAGATCATGCTGGGGACATGAAAAGCAGCAC TTGTGATTCTTTAAACTCAAAGTCTGAAGTGGCAGAAGAGCCAGTTATTTCTAAGGGAACCACATGTTCACCTTATCTAT GCTCTAATGGGGGCCTGGAGGAGCTTGAGGTTAACCTCTTATCCTGGCTTAAAATTTGGATTATCTTTGTTTTTACGCAG CCACTGTATAGTTGATACCGGCTTTTCCTAAATTGCTTCTTATGCATGATATGGTTATCTTGAATCCATATAGTTTGAGT TTAATAACTACGCATTGCTTAAGTTTTTTACAGACATCCAATCATATTGAACTATCTTGTCACATCACAAATGAATTCAA ATGAAAAAGACTAGAAAGACAAGATGGTGAAATATAATTGAATGCCTGTGTAAAACTTATTTACAATGTTGGTATATAAT TACTAAATTCTTCGTTCATATAATAATGTCACACGAAGCTGACAGGCTACTCTCTGAATTTTCAGAGGAGGGTATTGAAT GTGCATTTTTTCAAGTCACTTTATCCAACCTAACAACATAAGAAGCTGGATTATATTTCTTTGCTTTAGTTCTCGGAGAA TCCTTACATTCTGAACATGCTTGTTTTGTTACTTTTATTATTACTTGACCAATCCTATTATTCACTGGCATTATGTGAAA ATTACAACTTCTTTTAGCATGCTATAATGGTGTTAAGAAATTGACTATTTTCTCCCCCCACTTCTATTTCTTTTCCCCTT TTGTTTTTGTTACAGCCAGCTGAGTTGTCAGCACCATTGTTAAGTGGTGTCATCACTCCCGTACCACAGCGGAAGCCTCT TATCAGGTAGAGTGGTAGATAGTATCAGTTGCTAACATACTACTTGTCATGATTTGCATTTTCTTACCCTTGGGTTGGTA GGCTTTGTTACATTTAAAATTGATTTTGGAGTTTAAATCTTTGTTACTCTCTTATTTTCAGGTTGAACTTCACCTCCTTA GGCAAAGCTGCTGCGGATAAAAGTTCCTAGAGACTTGAAGGCTTAAGCAGCAGCTTGAAGAAACTGTAAAATTGTCATTT ATAGCTCTTTGTAACTTTTCTGTAACAATTTTGAAGTAATAAACCTGACCTAGAAACGACATAAATTTTTATTTGAATGT AAATGAGAATATGTTGCCCCGGCAGAATAAAAATAGATTCTTATCAATATATCTATTTCCTAGTTTCTGATGCCAACCAT GTTTTAATTTTAAATATGTTTAATAATTGTATTCTCATTATCTCAAGGAGTGATTAACTATAAGTGGTGAAATAGCATAA AAACTATAAGTAGTGAAATTGTTGATCGAGTGTCTATGATGCCCATTTATAAACATCAAAATG
CDS sequence (LotjaGi2g1v0201600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTATCCCTGGATTGAGCAATCAAAATAGTGGGCAGCAAAGATTAGGCATAACTGAGCCTATTTCATTGGCTGGACC AACTGAGTGTGATGTGATCAAGACCCGCGGACTCGAGAAGTACTTGCAAGGTGCTGGATTGTATGAGAGTCAGCAGGAGG CTGTGGGTAGGGAGGAAGTTCTTGGCAGGCTAGACCAGATTGTGAAGAATTGGATTAAGATTGTTAGCCGTGCCAAGGGA TTCAATGAACAACTAGTGCAAGAAGCAAATGCAAAGATTTTCACCTTTGGCTCCTATAGGCTTGGGGTGCATGGCCCTGG AGCTGATATTGATACTCTTTGTGTGGGACCTAGACATGCAACCAGACATGAAGATTTCTTTGGTGAGCTAGGTAAGATGC TATTCGAGTCGCAGGAAGTAACAGAATTTCACCCTGTGCCTGATGCACATGTCCCTGTGATGAAATTCAAATTCAATGGA GTTTCTGTAGATCTCCTTTATGCAAGATTGTCATTGTGGGTTATTCCTGAAGACTTAGATATATCACAGGAATCAGTATT ACAAAATGTAGATGAACAAACTGTTCTCAGTCTTAATGGTTGCAGAGTAACTGATCAAGTCCTGCGTCTAGTCCCAAATA TTCAGAATTTTCGCACAACATTGAGATGCATGAGATTTTGGGCAAAGCGTCGTGGTGTTTATTCAAATGTTGCGGGTTTT CTTGGTGGTATAAACCTGGCATTGCTTGTTGCTCGAATATGCCAGCTATATCCTAACGCACTGCCTAATATGTTAGTGTC TCGATTCTTTAGGGTATATACTCAATGGCGATGGCCAAACCCAGTCATGCTTTGTGGTATTGAAGAAGGATCTCTTGGAC TACAGATTTGGGATCCTAGAAGAAATCCCAAGGATAAATTTCATCTAATGCCTATAATTACTCCTGCTTATCCTTGCATG AACTCTACTTACAATGTGACAGCAAGTACACTGCGTATTATGTCAGAGGAGTTTCAGAGGGGAAGTGAAATATGTGAGGC TATGGAGGGTAGCAAGGCTGATTGGGATTCTCTTTTTGAGCCATATCCCTTTTTTGAATCTTACAAGAATTATCTACAGA TAGACATTGCAGCAGAGAATGCAGATGATCTTAGATCATGGAAAGGATGGGTTGAGTCCCGTCTCCGCCAGTTGACATTG AAGATTGAGAGGCACACATATGGTGTTCTTCAGTGTCATCCATATCCTGGTGAATTTTCAGACAAATCTAGACCTTTCCA CTGCTGTTACTTTATGGGTCTGCAGCGTAAGCAAGGTGTTCCAGTGAATGAAGGTGAACAATTTGACATAAGGCTAACTG TTGAAGAATTTAAGCTTGCTGTCAATTCTTACAGTACTTGGAAACCTGGAATGGATATCCATGTCTCCCATGTTAAGCGC CGTAATATACCAAGCTTCATATTTCCTGGTGGTGTCCGACCTTCCCTCCCATCTAATAGACAAAGTTCCAAATTAAGGGA TTCTGGACTTGGTCAAGCAGAAAAGTCTCAAGGAGTTAAGGTTGACTTTGTAGCAAATGATATGAAGAAGAGAAAGCGAC CAGAGGAGAACTTGGATAGTAATAACTCGAGGAACTCAATGTCCTTTGTATCTTTACCTCCACCCAACGGCGATGTTCAC AAAGATATAACTCCTATTAGCGCCTCTGGTTCTTGTTCTATGAAATTTGATGACTCAGAAGTCAGCAGTATAGGTGCCCC AAAAAGTGAGAAACCTTCTGGGAAATCTATAGGGGAGATTCCTTCTGGGGATAGTGAGACCAATGGATTGGTAACAGGCA ACCAACAAGAAAACCCTATACTTACTGCTCCTGATACATCTAATTCTAAAGAAGAGGAAAAACTGGCCATTGAGAAGATC ATGTCCGGTCCCTATGATGGGCGTCAGGCCTTGGCAGAACCGGATGAACTTGAAGATGATAATATGTATCCAAATCAAGT CAAAGATCATGCTGGGGACATGAAAAGCAGCACTTGTGATTCTTTAAACTCAAAGTCTGAAGTGGCAGAAGAGCCAGTTA TTTCTAAGGGAACCACATGTTCACCTTATCTATGCTCTAATGGGGGCCTGGAGGAGCTTGAGCCAGCTGAGTTGTCAGCA CCATTGTTAAGTGGTGTCATCACTCCCGTACCACAGCGGAAGCCTCTTATCAGGTTGAACTTCACCTCCTTAGGCAAAGC TGCTGCGGATAAAAGTTCCTAG
Protein sequence (LotjaGi2g1v0201600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAIPGLSNQNSGQQRLGITEPISLAGPTECDVIKTRGLEKYLQGAGLYESQQEAVGREEVLGRLDQIVKNWIKIVSRAKG FNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRHEDFFGELGKMLFESQEVTEFHPVPDAHVPVMKFKFNG VSVDLLYARLSLWVIPEDLDISQESVLQNVDEQTVLSLNGCRVTDQVLRLVPNIQNFRTTLRCMRFWAKRRGVYSNVAGF LGGINLALLVARICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCGIEEGSLGLQIWDPRRNPKDKFHLMPIITPAYPCM NSTYNVTASTLRIMSEEFQRGSEICEAMEGSKADWDSLFEPYPFFESYKNYLQIDIAAENADDLRSWKGWVESRLRQLTL KIERHTYGVLQCHPYPGEFSDKSRPFHCCYFMGLQRKQGVPVNEGEQFDIRLTVEEFKLAVNSYSTWKPGMDIHVSHVKR RNIPSFIFPGGVRPSLPSNRQSSKLRDSGLGQAEKSQGVKVDFVANDMKKRKRPEENLDSNNSRNSMSFVSLPPPNGDVH KDITPISASGSCSMKFDDSEVSSIGAPKSEKPSGKSIGEIPSGDSETNGLVTGNQQENPILTAPDTSNSKEEEKLAIEKI MSGPYDGRQALAEPDELEDDNMYPNQVKDHAGDMKSSTCDSLNSKSEVAEEPVISKGTTCSPYLCSNGGLEELEPAELSA PLLSGVITPVPQRKPLIRLNFTSLGKAAADKSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 232 | 232 | - | – | |
| PANTHER | 1 | 614 | 614 | 0.0 | – | |
| PANTHER | 1 | 614 | 614 | 0.0 | – | |
| Pfam | 17 | 361 | 345 | 5.2E-107 | ||
| Gene3D | 17 | 358 | 342 | 2.0E-152 | – | |
| SUPERFAMILY | 17 | 210 | 194 | 2.38E-49 | ||
| Gene3D | 49 | 205 | 157 | 2.0E-152 | ||
| CDD | 57 | 211 | 155 | 2.42263E-29 | – | |
| Pfam | 78 | 166 | 89 | 2.8E-10 | ||
| SUPERFAMILY | 212 | 361 | 150 | 2.88E-63 | – | |
| TMHMM | 232 | 254 | 23 | - | – | |
| Phobius | 233 | 253 | 21 | - | – | |
| Phobius | 254 | 753 | 500 | - | – | |
| SUPERFAMILY | 362 | 488 | 127 | 7.85E-37 | ||
| Gene3D | 363 | 478 | 116 | 1.7E-21 | – | |
| Pfam | 364 | 423 | 60 | 4.3E-13 | ||
| MobiDBLite | 490 | 633 | 144 | - | – | |
| MobiDBLite | 495 | 510 | 16 | - | – | |
| MobiDBLite | 524 | 539 | 16 | - | – | |
| MobiDBLite | 600 | 626 | 27 | - | – | |
| MobiDBLite | 654 | 683 | 30 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. | ||
| Molecular function | Polynucleotide adenylyltransferase activity | Catalysis of the template-independent extension of the 3'- end of an RNA or DNA strand by addition of one adenosine molecule at a time. Cannot initiate a chain 'de novo'. The primer, depending on the source of the enzyme, may be an RNA or DNA fragment, or oligo(A) bearing a 3'-OH terminal group. | ||
| Molecular function | Nucleotidyltransferase activity | Catalysis of the transfer of a nucleotidyl group to a reactant. | ||
| Biological process | RNA 3'-end processing | Any process involved in forming the mature 3' end of an RNA molecule. | ||
| Biological process | RNA polyadenylation | The enzymatic addition of a sequence of adenylyl residues at the 3' end of an RNA molecule. |
Expression pattern of LotjaGi2g1v0201600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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