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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR011713
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 56 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 7.964s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0095249.1
n.a. PREDICTED: TMV resistance protein N-like [Cicer arietinum] gi|502156468|ref|XP_004510489.1| chr0 40108382 40114953 -
2 domain predictions
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Lj0g3v0115399.1
n.a. NBS resistance protein [Medicago truncatula] gi|357513713|ref|XP_003627145.1| chr0 50725473 50727430 -
2 domain predictions
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Lj0g3v0214779.1
n.a. TIR-NBS-LRR type disease resistance protein [Medicago truncatula] gi|357452805|ref|XP_003596679.1| chr0 108871376 108877767 +
2 domain predictions
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Lj0g3v0255889.1
n.a. NBS-LRR resistance-like protein [Medicago truncatula] gi|357521387|ref|XP_003630982.1| chr0 132878474 132884068 +
2 domain predictions
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Lj0g3v0282469.1
n.a. NBS-LRR resistance-like protein 4G [Medicago truncatula] gi|357515077|ref|XP_003627827.1| chr0 146440998 146447078 +
2 domain predictions
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Lj0g3v0333849.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356497765|ref|XP_003517729.1| chr0 174729003 174736727 +
2 domain predictions
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Lj1g3v0913150.2
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356497765|ref|XP_003517729.1| chr1 11606378 11612816 -
2 domain predictions
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Lj1g3v1361010.4
n.a. NBS-LRR resistance-like protein [Medicago truncatula] gi|357521387|ref|XP_003630982.1| chr1 16286719 16294297 -
2 domain predictions
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Lj3g3v0423790.1
n.a. NBS-LRR resistance-like protein [Medicago truncatula] gi|357521387|ref|XP_003630982.1| chr3 3709334 3712514 +
2 domain predictions
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Lj3g3v1101570.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356545124|ref|XP_003540995.1| chr3 14669025 14672363 +
2 domain predictions
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Lj3g3v1556600.1
n.a. Disease-resistance protein [Medicago truncatula] gi|357452821|ref|XP_003596687.1| chr3 19840722 19843392 -
2 domain predictions
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Lj3g3v2665420.1
n.a. Nbs-lrr resistance protein [Medicago truncatula] gi|357513731|ref|XP_003627154.1| chr3 32525785 32531307 +
2 domain predictions
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Lj3g3v2665430.1
n.a. Nbs-lrr resistance protein [Medicago truncatula] gi|357513731|ref|XP_003627154.1| chr3 32531498 32543438 +
2 domain predictions
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Lj3g3v2666470.1
n.a. Nbs-lrr resistance protein [Medicago truncatula] gi|357513731|ref|XP_003627154.1| chr3 32545590 32551665 +
2 domain predictions
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Lj3g3v2666490.1
n.a. Nbs-lrr resistance protein [Medicago truncatula] gi|357513731|ref|XP_003627154.1| chr3 32561159 32568241 -
2 domain predictions
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Lj3g3v2667550.1
n.a. NBS resistance protein [Medicago truncatula] gi|357513713|ref|XP_003627145.1| chr3 32584795 32590437 -
2 domain predictions
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Lj3g3v2692950.1
n.a. NBS-LRR resistance-like protein 4T [Medicago truncatula] gi|357514703|ref|XP_003627640.1| chr3 32778459 32787246 +
2 domain predictions
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Lj4g3v3099550.2
n.a. NBS-LRR resistance-like protein [Medicago truncatula] gi|357521387|ref|XP_003630982.1| chr4 41315105 41320386 -
2 domain predictions
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Lj4g3v3099550.3
n.a. disease resistance protein [Phaseolus vulgaris] gi|74231152|gb|ABA00702.1| chr4 41315105 41320386 -
2 domain predictions
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Lj4g3v3113360.1
n.a. NBS-LRR resistance-like protein [Medicago truncatula] gi|357521387|ref|XP_003630982.1| chr4 41674785 41680004 -
2 domain predictions
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Lj5g3v0875650.1
n.a. NBS-LRR resistance-like protein 4G [Medicago truncatula] gi|357515077|ref|XP_003627827.1| chr5 12748785 12757034 +
2 domain predictions
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Lj6g3v1601950.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356545122|ref|XP_003540994.1| chr6 18033720 18035927 -
2 domain predictions
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LotjaGi1g1v0274700.1
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|K7K1I4|K7K1I4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0274700 LjG1.1_chr1 67283461 67290152 +
2 domain predictions
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LotjaGi1g1v0324100.1
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A0R0LCQ5|A0A0R0LCQ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0324100 LjG1.1_chr1 77592516 77602886 -
2 domain predictions
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LotjaGi1g1v0324100.2
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A0R0LCQ5|A0A0R0LCQ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0324100 LjG1.1_chr1 77592516 77603139 -
2 domain predictions
 –
LotjaGi1g1v0324100.3
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A0R0LCQ5|A0A0R0LCQ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0324100 LjG1.1_chr1 77596012 77603018 -
2 domain predictions
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LotjaGi1g1v0456300.1
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7K107|G7K107_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi1g1v0456300 LjG1.1_chr1 95966264 95975413 -
2 domain predictions
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LotjaGi1g1v0456300.2
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7K107|G7K107_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi1g1v0456300 LjG1.1_chr1 95966264 95980041 -
2 domain predictions
 –
LotjaGi1g1v0456300.3
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7K107|G7K107_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi1g1v0456300 LjG1.1_chr1 95966594 95980037 -
2 domain predictions
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LotjaGi1g1v0456300.4
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7K107|G7K107_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi1g1v0456300 LjG1.1_chr1 95966607 95979988 -
2 domain predictions
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LotjaGi1g1v0456300.5
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7K107|G7K107_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi1g1v0456300 LjG1.1_chr1 95966709 95975586 -
2 domain predictions
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LotjaGi2g1v0205800.1
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A072VIA7|A0A072VIA7_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi2g1v0205800 LjG1.1_chr2 64907548 64916359 -
2 domain predictions
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LotjaGi2g1v0342000.1
n.a. Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A072UMY5|A0A072UMY5_MEDTR Disease resistance protein (TIR-NBS-LRR class), putative; Found in the gene: LotjaGi2g1v0342000 LjG1.1_chr2 81923338 81931098 +
2 domain predictions
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LotjaGi2g1v0342000.2
n.a. Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A072UMY5|A0A072UMY5_MEDTR Disease resistance protein (TIR-NBS-LRR class), putative; Found in the gene: LotjaGi2g1v0342000 LjG1.1_chr2 81923338 81931098 +
2 domain predictions
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LotjaGi3g1v0045400.1
n.a. Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7IM52|G7IM52_MEDTR Disease resistance protein (TIR-NBS-LRR class), putative; Found in the gene: LotjaGi3g1v0045400 LjG1.1_chr3 4841988 4851503 -
2 domain predictions
 –
LotjaGi3g1v0045400.2
n.a. Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7IM52|G7IM52_MEDTR Disease resistance protein (TIR-NBS-LRR class), putative; Found in the gene: LotjaGi3g1v0045400 LjG1.1_chr3 4843698 4851450 -
2 domain predictions
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LotjaGi3g1v0234800.1
n.a. Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7IM52|G7IM52_MEDTR Disease resistance protein (TIR-NBS-LRR class), putative; Found in the gene: LotjaGi3g1v0234800 LjG1.1_chr3 37219943 37225328 +
2 domain predictions
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LotjaGi3g1v0238500.2
n.a. Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7IM44|G7IM44_MEDTR Disease resistance protein (TIR-NBS-LRR class), putative; Found in the gene: LotjaGi3g1v0238500 LjG1.1_chr3 38316393 38330475 -
2 domain predictions
 –
LotjaGi3g1v0238500.3
n.a. Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7IM44|G7IM44_MEDTR Disease resistance protein (TIR-NBS-LRR class), putative; Found in the gene: LotjaGi3g1v0238500 LjG1.1_chr3 38316892 38330157 -
2 domain predictions
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LotjaGi3g1v0421400.1
n.a. Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|V7ATI6|V7ATI6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0421400 LjG1.1_chr3 82979547 82984196 +
2 domain predictions
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LotjaGi3g1v0422200.1
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7LI80|G7LI80_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi3g1v0422200 LjG1.1_chr3 83100245 83108463 +
2 domain predictions
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LotjaGi3g1v0422200.2
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7LI80|G7LI80_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi3g1v0422200 LjG1.1_chr3 83100245 83108463 +
2 domain predictions
 –
LotjaGi3g1v0422400.1
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7LI80|G7LI80_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi3g1v0422400 LjG1.1_chr3 83113300 83121198 -
2 domain predictions
 –
LotjaGi3g1v0422400.2
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7LI80|G7LI80_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi3g1v0422400 LjG1.1_chr3 83113300 83124743 -
2 domain predictions
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LotjaGi3g1v0422900.1
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7LI64|G7LI64_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi3g1v0422900 LjG1.1_chr3 83171074 83186505 -
2 domain predictions
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LotjaGi3g1v0422900.2
n.a. Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7LI64|G7LI64_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi3g1v0422900 LjG1.1_chr3 83171166 83186329 -
2 domain predictions
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LotjaGi3g1v0502700.2
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A0R0LCQ5|A0A0R0LCQ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0502700 LjG1.1_chr3 92098841 92106783 +
2 domain predictions
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LotjaGi3g1v0502700.3
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A0R0LCQ5|A0A0R0LCQ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0502700 LjG1.1_chr3 92098858 92105373 +
2 domain predictions
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LotjaGi4g1v0099400.2
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A0R0LCQ5|A0A0R0LCQ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0099400 LjG1.1_chr4 13480330 13486469 -
2 domain predictions
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LotjaGi5g1v0135800.1
n.a. Disease resistance protein (TIR-NBS-LRR class); TAIR: AT4G12010.1 Disease resistance protein (TIR-NBS-LRR class) family; Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A072VIA7|A0A072VIA7_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi5g1v0135800 LjG1.1_chr5 32189425 32198473 +
2 domain predictions
 –