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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0421400 |
| Transcript ID | LotjaGi3g1v0421400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|V7ATI6|V7ATI6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0421400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:82979547..82984196) extracted from Lotus japonicus Gifu genome v1.2.
TTGAACCAGCAACTCCCAATAGCAAACTAGAACATTGAGCTAGCATGTCTTCTTCTTCTTCCAAAAAGCATGATGTATTT ATCAGCTTTCGAGGTGAAGACACCCGAACCAATTTCACTAGCCATCTTCTTACTGCTCTCGATGACAACAGTATCCGAAC ATTCATAGACTACAAGCTTAAAAAAGGAGATGATGTTTGGCCATCACTTTCCCAAGCAATCCAGGACTCACGCATATCCA TTGTTGTTTTCTCAGAGAATTATGCTTCATCGACATGGTGCTTGGAAGAACTGGTCAAGATAATGGAATGCCGGAAACAT CAGAGTCAGGTTGTGATACCTGTGTTCTATGAAATTGATCCATCATGCGTGCGGAACCAGACAGGGAGTTACGAGGTAGC ATTTACAAACCATGAACAAGACCTCAATGACAATGATTCCGATCAACACAAACTACGTAGGTGGAGAGTTGCTCTTACCC AAGCTGCCAATATTTCTGGATGGGACACTCGAAGTCGAACCCTCAGGTAACTATGTATTAATGTATGGATGCTGAGAATT CAAGTATATACAATTTTAGTCTTTAGAAGTAGTTAGATGAAAGATAATATTTTTTCTTGTTGGGTGAAATGAGTTTTACA TTGGGGTTACGGTAGCGGTTGTCATTGCAGCTCTATCGCGATATGCTGCTGCGGGAACTCCAAAACCCTTCAAGTTGCAG CCGCAATTGGTTGCTGAACACAATTTAATACCCTTATATGTGATCTGTTTAGGTATAGCTTTGGCTTCTCCAACAATCAA TCCAAAGTAATCAAATGCAGCCACTGCTGTAATGATATCAATGATTCACATATATTTCTTTTAAATGTTTAATTGCTTCA GTTAGTTTCTTCAAGCATCATAGAGTATTTCCTCATGTTCTGTTTATTCGTTTATATGCTAGGGATGACTCTCAAGCCAT CTACAACATTGTCAAAGATGTTTCACAAAAGCTATACTTCCTGAACCCTGATGAACTGAAAGGCATTGTTGGAATTGATG AAACCTCGAAAGAACTTGAATTATTACTGAAAAGCTTTCCAGTAATTGGAATTTGGGGTATGGGTGGGATAGGAAAAACC ACCATTGCTAAAGTTATGTTTGCCAAACTCTTTCCCCAGTATGACAGTGTCTGCTTCTTGGCAAATATAAGAGAAGAATC GGAAAGGATTGGACTAACATCTTTACGTCAAGAGCTTTTCAGTAAGCTACTAAAGGAAGAAGTTCCTGCTTCTGATGTTG TAGGCTCCACATCCATTATGAGGAGGCTCAGTAGTAAACAGGTTTTAATTGTACTTGATGATGTAGATAGTTTTGAGCAG TTAGAATCTTTGTGTGGAGAACGAAGTGATCTAGGAGAAAATATTACCCTCATTGTAACAACAAGGGATAGGCAATTGCT TATTGAAAGAGTTGATAAGATATATGAGGTCAACAAAAGGAACGATGAAGAATCTCTAGAGCTTTTTTGCTTGAATGCCT TCAAGAAAAGTCATCCCCAAGAAGGATATAAGGATCTCTCAGATAGGGCAGTCCATTATGCAAAGGGCATTCCATTAGCT TTAAAAGTATTGGGTTCACATCTCCTTTCCAAAAATCATAAATTTTGGGAAAGTACATTGAGAAAACTTGAGAAGTATCC CGATGTGAAAATTTTGAATGTCTTGAAAGTTAGCTATGATGGATTAGATGAACCAGCAAAGCAAATATTTCTAGACATTG CATTCTTTTTCAAAAATAAAGATAAACATATGGCTGTCGGGATACTTGATGGTTGTGATTTTTTCGCAACTAGTGGAATA GATGTCCTAGTAGATAAAGCTCTGATAACTATTTCATATAACAACAGTATACAAATGCATGATTTGCAGCAAGATGTGGC TTCAGATATAGTTCGGAAAGAATGTTTGAGAAACCTTGGAGGACGCAGCCGATTGAGGGATGATGAAGTTTATAATGTAC TTGAAAATAACAGGGTAAGGAAAAGATTCACTAACCTATTATTATACATTGCTCATGATAGAAGTTGTAGTTAATTTGAT GTTTTTTACTTCTTGATTTGTCAGGGGACTGAAAAAGTTGAAGGAATGACGTTAGATTTGTCCCAAGTATTGGTTCTGAA ATTGAGTGCTGACACATTCAACAAGATGCCTAATTTGAGATTTCTTCAGTTATATGTCCCTGAGGGCAAGAGACCAAGTA CTGTGTACCATTGTACATTTCTTGAGGCATTTTCTGATGAATTGAGGTATTTTGAGTGGGATGGATATCCTTTTTCGTCT CTTCCACCAAGTTTTTGTGCTAAGTATCTTGTTGAGATTCGCATGCCACACAGCAATATCAAAGAAATTTGGCAAGGAGT ACAGGTAAAAGATATATAAAATCTATGCTAACACTTTCAATAATATTACAATATGAGGATTCTATTTCCCATTGTGATGT TGCCTACTTTTCAACTGTTACAGGACCTTGTGAATTTAGAGGCAATTGAACTCCGTGAATGCAAACAGTTGCTAAAGCTT CCAGATTTGTCCAGGGCGTCAAAGCTTAAACGAGTGAATCTCTTTGGCTGTGAAAGCTTGCTTGATGTTCATCCTTCCGT TTTGTCTCTCAGAACACTTGAAACTTTGATTCTGGACAGGTGCAAAAAACTCAAGAGTCTTAAAAGTGAGTGGCATTCAC ACTCACTAGTGAATATCAGTGTCAATGACTGCATTGTCCTTGAGGAATTCGCAGTGTCCTCCGAATTGATTGAAAGGTTG GATTTAAGCAAGACGCGAGTCAAGAAATTACACTCATCAATTGGTGGTCTGAGCAAGCTTGTGTGGCTTAACCTACAAGG TTTTTGGCTGGAGAATCTTCCAGATGAGCTATCGTGCCTGACATCTCTTCAGGAGCTTAGGATTTCTAGCTGCCGACTAC TTGACGAAGAGAAGCTACGTGTCCTGTGTGATGGCTTGCGATCCTTAAAAATACTACATTTGTGTAATTGCCGTAACTTG GTTGAACTCCCCGACAACATCAGCACCTTATCATCATTACATGAATTGAGGCTCGACGGAAGCAATATTAAGAGTTTGCC TAAAAGTATCAGGGATCTTCTAAACCTGGAGATTTTATCCTTAAAACAGTGTGTGTTGCTTGAGGTCATACATGGGATTC CACCATTCATCAAAGAGCTTCACGCTGGCAACTGTAGGTCATTGAGGAAGGTATCCTCTTCAAAGGCTTTTTCAATTATC CCGGTGGAAGCAGGGGAGAAATACATTTCGTTTGAGAATGGGGGGGATATGAATGAATGTTCACGCCTCTGGATTATGGA AGAAGCCCTGTTTGATATGAAGATTGCTGCGCTGCAAAATTTATTTGAAAGATGGGGGAAACTTCTCAATAAGTCCCACC AAAATTATAGCAGTGTTAAGATCTGTTTACCAGGAAGGAGAGTCCCGAGGCATTTTTCATATCGAGTCGAACAGTCCTCC ATTACCATTAAACTTCCTAACACACGTTCTGACTTGCTAGGCCTGGTTTACTCTCTGGTTCTTACTCCTGCTCTATCAGC TGGAATGATGGAAGATGCTAAAATCCGTTGTCAATGTCGTTTGGCAAACGGTACATATGTGGGCAAAGCGACTATGTGGC ATAGTGTTTCCTTGTATGGATTGGAATCCGATCATGTTTTTATGTGGTATGATCCATTCCACTGTGACAGAATTCTCCGC TATTATAAACAACTTGATTCAGTTGTTTGCTTCGAGTTCTTTGTTACATATGGTACTGAGGAACCTCATCAGAAGATTAG TATCGTAGAGTGTGGGGTCCACCTACTAAGTGTCTCGCAGTTAGAGTTTCGCAAATTCTTGCGAGAATCAAGGATAGAGT TGGAGTTGAAGTTGGAGTTGGGGTTGAGGTTTGGATTGGTGTTAGACTTGGCGCGGAGATTTAGTGAAGTGGAGTGGGGG TTATACCAAGCATTGGAGATGGGATGTGAAGTGGACGGATCATTGAGATTAGAGTTAGAATCTCGACGTCGGGCAATTTT AAGGTTAATTGATGGTTTGTAAGATTGAACAAAAAATGGAAGAAAAAAATGTGGGAAATAAAAGATGAGAAGTGTAGTTC ATGTTCCTATACAATGGCTGCATAACTGGTATGAATCTGACTCCTCTTTCACTCTTTCCCTCTTGGAAAAGTAATGAACA AACTTGTGCACTTGCAAGCTGATGTTTTATCATTTACTTCCATGTTCTGTTAGAGGGAACTTATGCAGCTGAAGGCATAA GATAGATTTGCACTTGCAAGCTGATGAGACATTCAATATGATGACTTAGTTTTTATTTTTTATTTTTTGAAACTCTATGA TGACTTAGTTAATATTTATTAGATTGTATGTACTCTCATGTATGAAGAGATCAGTTACTGTGTACCATTCTCCTGTGCCA TTTCCTAACACATTGAACTACCTGGAGTCGACTGGATACCCTTTTAAGTCTCTTTTACCATCTTTTTTTGCTATGCTACT TGTTGAGATTCGCTTGCCGCACAGCTACATTGAGTATCTATGGCACGGGATGCAGGTGCGTGTGCGTACATATATCACGT TTGCGTTTGT
CDS sequence (LotjaGi3g1v0421400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTTCTTCTTCTTCCAAAAAGCATGATGTATTTATCAGCTTTCGAGGTGAAGACACCCGAACCAATTTCACTAGCCA TCTTCTTACTGCTCTCGATGACAACAGTATCCGAACATTCATAGACTACAAGCTTAAAAAAGGAGATGATGTTTGGCCAT CACTTTCCCAAGCAATCCAGGACTCACGCATATCCATTGTTGTTTTCTCAGAGAATTATGCTTCATCGACATGGTGCTTG GAAGAACTGGTCAAGATAATGGAATGCCGGAAACATCAGAGTCAGGTTGTGATACCTGTGTTCTATGAAATTGATCCATC ATGCGTGCGGAACCAGACAGGGAGTTACGAGGTAGCATTTACAAACCATGAACAAGACCTCAATGACAATGATTCCGATC AACACAAACTACGTAGGTGGAGAGTTGCTCTTACCCAAGCTGCCAATATTTCTGGATGGGACACTCGAAGTCGAACCCTC AGGGATGACTCTCAAGCCATCTACAACATTGTCAAAGATGTTTCACAAAAGCTATACTTCCTGAACCCTGATGAACTGAA AGGCATTGTTGGAATTGATGAAACCTCGAAAGAACTTGAATTATTACTGAAAAGCTTTCCAGTAATTGGAATTTGGGGTA TGGGTGGGATAGGAAAAACCACCATTGCTAAAGTTATGTTTGCCAAACTCTTTCCCCAGTATGACAGTGTCTGCTTCTTG GCAAATATAAGAGAAGAATCGGAAAGGATTGGACTAACATCTTTACGTCAAGAGCTTTTCAGTAAGCTACTAAAGGAAGA AGTTCCTGCTTCTGATGTTGTAGGCTCCACATCCATTATGAGGAGGCTCAGTAGTAAACAGGTTTTAATTGTACTTGATG ATGTAGATAGTTTTGAGCAGTTAGAATCTTTGTGTGGAGAACGAAGTGATCTAGGAGAAAATATTACCCTCATTGTAACA ACAAGGGATAGGCAATTGCTTATTGAAAGAGTTGATAAGATATATGAGGTCAACAAAAGGAACGATGAAGAATCTCTAGA GCTTTTTTGCTTGAATGCCTTCAAGAAAAGTCATCCCCAAGAAGGATATAAGGATCTCTCAGATAGGGCAGTCCATTATG CAAAGGGCATTCCATTAGCTTTAAAAGTATTGGGTTCACATCTCCTTTCCAAAAATCATAAATTTTGGGAAAGTACATTG AGAAAACTTGAGAAGTATCCCGATGTGAAAATTTTGAATGTCTTGAAAGTTAGCTATGATGGATTAGATGAACCAGCAAA GCAAATATTTCTAGACATTGCATTCTTTTTCAAAAATAAAGATAAACATATGGCTGTCGGGATACTTGATGGTTGTGATT TTTTCGCAACTAGTGGAATAGATGTCCTAGTAGATAAAGCTCTGATAACTATTTCATATAACAACAGTATACAAATGCAT GATTTGCAGCAAGATGTGGCTTCAGATATAGTTCGGAAAGAATGTTTGAGAAACCTTGGAGGACGCAGCCGATTGAGGGA TGATGAAGTTTATAATGTACTTGAAAATAACAGGGGGACTGAAAAAGTTGAAGGAATGACGTTAGATTTGTCCCAAGTAT TGGTTCTGAAATTGAGTGCTGACACATTCAACAAGATGCCTAATTTGAGATTTCTTCAGTTATATGTCCCTGAGGGCAAG AGACCAAGTACTGTGTACCATTGTACATTTCTTGAGGCATTTTCTGATGAATTGAGGTATTTTGAGTGGGATGGATATCC TTTTTCGTCTCTTCCACCAAGTTTTTGTGCTAAGTATCTTGTTGAGATTCGCATGCCACACAGCAATATCAAAGAAATTT GGCAAGGAGTACAGGACCTTGTGAATTTAGAGGCAATTGAACTCCGTGAATGCAAACAGTTGCTAAAGCTTCCAGATTTG TCCAGGGCGTCAAAGCTTAAACGAGTGAATCTCTTTGGCTGTGAAAGCTTGCTTGATGTTCATCCTTCCGTTTTGTCTCT CAGAACACTTGAAACTTTGATTCTGGACAGGTGCAAAAAACTCAAGAGTCTTAAAAGTGAGTGGCATTCACACTCACTAG TGAATATCAGTGTCAATGACTGCATTGTCCTTGAGGAATTCGCAGTGTCCTCCGAATTGATTGAAAGGTTGGATTTAAGC AAGACGCGAGTCAAGAAATTACACTCATCAATTGGTGGTCTGAGCAAGCTTGTGTGGCTTAACCTACAAGGTTTTTGGCT GGAGAATCTTCCAGATGAGCTATCGTGCCTGACATCTCTTCAGGAGCTTAGGATTTCTAGCTGCCGACTACTTGACGAAG AGAAGCTACGTGTCCTGTGTGATGGCTTGCGATCCTTAAAAATACTACATTTGTGTAATTGCCGTAACTTGGTTGAACTC CCCGACAACATCAGCACCTTATCATCATTACATGAATTGAGGCTCGACGGAAGCAATATTAAGAGTTTGCCTAAAAGTAT CAGGGATCTTCTAAACCTGGAGATTTTATCCTTAAAACAGTGTGTGTTGCTTGAGGTCATACATGGGATTCCACCATTCA TCAAAGAGCTTCACGCTGGCAACTGTAGGTCATTGAGGAAGGTATCCTCTTCAAAGGCTTTTTCAATTATCCCGGTGGAA GCAGGGGAGAAATACATTTCGTTTGAGAATGGGGGGGATATGAATGAATGTTCACGCCTCTGGATTATGGAAGAAGCCCT GTTTGATATGAAGATTGCTGCGCTGCAAAATTTATTTGAAAGATGGGGGAAACTTCTCAATAAGTCCCACCAAAATTATA GCAGTGTTAAGATCTGTTTACCAGGAAGGAGAGTCCCGAGGCATTTTTCATATCGAGTCGAACAGTCCTCCATTACCATT AAACTTCCTAACACACGTTCTGACTTGCTAGGCCTGGTTTACTCTCTGGTTCTTACTCCTGCTCTATCAGCTGGAATGAT GGAAGATGCTAAAATCCGTTGTCAATGTCGTTTGGCAAACGGTACATATGTGGGCAAAGCGACTATGTGGCATAGTGTTT CCTTGTATGGATTGGAATCCGATCATGTTTTTATGTGGTATGATCCATTCCACTGTGACAGAATTCTCCGCTATTATAAA CAACTTGATTCAGTTGTTTGCTTCGAGTTCTTTGTTACATATGGTACTGAGGAACCTCATCAGAAGATTAGTATCGTAGA GTGTGGGGTCCACCTACTAAGTGTCTCGCAGTTAGAGTTTCGCAAATTCTTGCGAGAATCAAGGATAGAGTTGGAGTTGA AGTTGGAGTTGGGGTTGAGGTTTGGATTGGTGTTAGACTTGGCGCGGAGATTTAGTGAAGTGGAGTGGGGGTTATACCAA GCATTGGAGATGGGATGTGAAGTGGACGGATCATTGAGATTAGAGTTAGAATCTCGACGTCGGGCAATTTTAAGGTTAAT TGATGGTTTGTAA
Protein sequence (LotjaGi3g1v0421400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSSSSKKHDVFISFRGEDTRTNFTSHLLTALDDNSIRTFIDYKLKKGDDVWPSLSQAIQDSRISIVVFSENYASSTWCL EELVKIMECRKHQSQVVIPVFYEIDPSCVRNQTGSYEVAFTNHEQDLNDNDSDQHKLRRWRVALTQAANISGWDTRSRTL RDDSQAIYNIVKDVSQKLYFLNPDELKGIVGIDETSKELELLLKSFPVIGIWGMGGIGKTTIAKVMFAKLFPQYDSVCFL ANIREESERIGLTSLRQELFSKLLKEEVPASDVVGSTSIMRRLSSKQVLIVLDDVDSFEQLESLCGERSDLGENITLIVT TRDRQLLIERVDKIYEVNKRNDEESLELFCLNAFKKSHPQEGYKDLSDRAVHYAKGIPLALKVLGSHLLSKNHKFWESTL RKLEKYPDVKILNVLKVSYDGLDEPAKQIFLDIAFFFKNKDKHMAVGILDGCDFFATSGIDVLVDKALITISYNNSIQMH DLQQDVASDIVRKECLRNLGGRSRLRDDEVYNVLENNRGTEKVEGMTLDLSQVLVLKLSADTFNKMPNLRFLQLYVPEGK RPSTVYHCTFLEAFSDELRYFEWDGYPFSSLPPSFCAKYLVEIRMPHSNIKEIWQGVQDLVNLEAIELRECKQLLKLPDL SRASKLKRVNLFGCESLLDVHPSVLSLRTLETLILDRCKKLKSLKSEWHSHSLVNISVNDCIVLEEFAVSSELIERLDLS KTRVKKLHSSIGGLSKLVWLNLQGFWLENLPDELSCLTSLQELRISSCRLLDEEKLRVLCDGLRSLKILHLCNCRNLVEL PDNISTLSSLHELRLDGSNIKSLPKSIRDLLNLEILSLKQCVLLEVIHGIPPFIKELHAGNCRSLRKVSSSKAFSIIPVE AGEKYISFENGGDMNECSRLWIMEEALFDMKIAALQNLFERWGKLLNKSHQNYSSVKICLPGRRVPRHFSYRVEQSSITI KLPNTRSDLLGLVYSLVLTPALSAGMMEDAKIRCQCRLANGTYVGKATMWHSVSLYGLESDHVFMWYDPFHCDRILRYYK QLDSVVCFEFFVTYGTEEPHQKISIVECGVHLLSVSQLEFRKFLRESRIELELKLELGLRFGLVLDLARRFSEVEWGLYQ ALEMGCEVDGSLRLELESRRRAILRLIDGL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 1090 | 1089 | 1.3E-245 | – | |
| Gene3D | 2 | 180 | 179 | 3.2E-67 | ||
| PANTHER | 2 | 1090 | 1089 | 1.3E-245 | – | |
| SUPERFAMILY | 3 | 153 | 151 | 8.76E-43 | ||
| ProSiteProfiles | 7 | 150 | 144 | 29.428 | ||
| Pfam | 8 | 178 | 171 | 4.5E-47 | ||
| SMART | 8 | 150 | 143 | 3.6E-47 | ||
| SUPERFAMILY | 178 | 433 | 256 | 1.07E-57 | ||
| Gene3D | 181 | 334 | 154 | 2.3E-23 | – | |
| SMART | 205 | 342 | 138 | 0.0025 | ||
| PRINTS | 208 | 223 | 16 | 6.7E-24 | – | |
| Pfam | 208 | 406 | 199 | 3.6E-25 | ||
| PRINTS | 282 | 296 | 15 | 6.7E-24 | – | |
| PRINTS | 374 | 388 | 15 | 6.7E-24 | – | |
| SUPERFAMILY | 410 | 495 | 86 | 3.26E-12 | ||
| Gene3D | 523 | 703 | 181 | 5.2E-20 | ||
| SUPERFAMILY | 528 | 867 | 340 | 3.57E-39 | – | |
| Pfam | 599 | 618 | 20 | 2.1E-5 | ||
| Gene3D | 710 | 882 | 173 | 1.6E-22 | ||
| PRINTS | 781 | 797 | 17 | 6.7E-24 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. | ||
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi3g1v0421400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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