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LotjaGi3g1v0422400.1

Overview

Field Value
Gene ID LotjaGi3g1v0422400
Transcript ID LotjaGi3g1v0422400.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.2 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7LI80|G7LI80_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi3g1v0422400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:83113300..83121198) extracted from Lotus japonicus Gifu genome v1.2.

CGTTAAAGAAAATCAAACTCATCAATGTCCAATTTTATCAGTGTCGTCAGAGTCAGTCAGCGAAATTAAGCAACAAAAAC TATTTACCTCGTATAATTTGGGTAGGTAGAGAAGAAGTCAATGAAGACGGCGTGGAAAACTTTAAAAAATTTAAGCAACA AAATTGAGACTGAATTGGCCCTTATTATATATAGGCATATATAAGAAGACCTGTTTGTTTCACTCTTTCTTTACAGTAAC AGTGGCAATGTCGTCTTCTTCTTCTTCTTCCGGCCAGTGTGTCTTCCCCAAAAAAGAGAAGAAATAAGTGTTAAATGTGA TATCTGATATGATGTGATAATAAAAGAGAAAAAAAGGTGTTTCAAATATGCACTATGAAGTGGTACATGATAACATGAAT CAGAGTTGTTTCTTATCATTGAGGGTGTGGGTGAATGTGTTGTGAGGCCTGGAATAAAAGGAAAAAGGTGAGGTATGTGT GTGCATGTGAGTGGTAAGGGAAAAAGAAAAAAGAAAAAGATGGTTTGACAATCATTCTATGGAGACCCACATTTCAAATT TTCAATTATAGAGATATAATAGAAGATAGAAGATTGAGAAATATCATATAAATCCATCCTATGTTAGTTACTTAAAGAAC ACACTCCTTCTTTCTTTCTTTCTTTCTCATTTTCTCTATACTAACAGTGGCTATGTCTTCTTTTTCTTCCAGTGTGGCTT CCCCAAAAAAGTTCGATGTTTTCATTAGTTTCAGGGGTGAGGACACCCGAGATAACTTCACAAGCCATCTCCATGCTGCT CTCAGAGACAAGAATATCGTAACCTACATAGATGATCAGCTTAAAAGAGGAGATGATGTTGGACTAGAGCTTGAAAAGGT AATCAAGAACTCGCTGATGTCTGTTGTGGTGTTCTCAGAAAGATACGCAACTTCAAAGTGGTGTTTGCAAGAATTGGTCA TGATAACGAAATGCAGAAGAGACGAGGGACAGGTTGTTCTTCCAGTGTTCTACAAAACAAATCCAACCGACGTGCGGAAT CAGACAGGGAGTTATCAGAAACCATTTGAAGAATATGATCAAGCTGCAGCCGCTGGTGAAATTATAACCGATCAAGACAA AGTGGGTAGGTGGAGAGCTGCTCTCTCTGAAGCAGCCAATATATCTGGATGGGACTCAAGTACCCACAAGTAAGTAACCA AATTCACTCTTTTTTCTCTCTCCTTATACACTTTGATCTGGTTTTAGTGGTTTGACCAAGATTCAAGTAGCTAGATAAGA TAATTTTTTTTTTGAAAGAACTAAGATAAGATATAATTTTTATAATGTTCTTCAGAAGAAAAAATAATCAATCTAGAGTA ACACAAATCCAGCCTAGGCCGACGGATCATCTCATCCCCGGATGCGCAAACTATAACTCATCCTCAATAAATGAGGGCGA CTATAACTCCCACTTGAGTTAAAGGCGTTGTCCCAATTCATAAATCAATCATGACACCCAATTAATACCATTATTGCGCT TTGAAACCCTTAGAAAACCCAGCAACCCAAGAGACAAAGTAAGCCTTTATAAGGGGACTTTGGCCCAACACCTGGGGCAT ATTCACTCTAATGCTAATTCAGGAATTGAGCTTGGAGATTTACCCTCTCAGCTTGGGACCCCCAAAGTTTAGAGAGAACA TCTCACAAGTATCAGGCGACATTCAAAACTACATTACACTCAAAATCATCTAGAGGGAAATGAATCCTAAATTTTTTAAA CATGGTATCACACACATAGATAAGAGAAAAAGAATCAGGTTCAGAGGCATCCGTGTAAATTCACTTGTCGTCCTCGCATG GCGTGGCAAGAACAACCCCTCATCTTCCTTACTTATCGTTCACGAAACACAGTAAGGATCTCCACATATTCCATCGACCC TTCTTCTATTGAGCAAGAAACTTTCTTTTGCGTCGGATTCCGACATGATGCAAGATCGCTACAAAGCAAAAGTGGTAGGG TTAAGGGTAGTTTCGAATGGCGAAGACAAAGAGCCGAAGGTAGGGTCACTGGAACACAAGCTAGAAAACCCCGCAGAGAC AAAATCCCCACCCACATATTAATTTTTTAATTATTAATTATATATCTGTCATTTAAATTTTAATTAAAAATAACGTGGTT AATGTTACGCTAGCTCTGACCTACCACTAGGCAAGGTCAACGGAGCTCTAACGCAGGGATAAAAAGAAAAAGATTTCAAT TAGAGACGAAAATTGAACTAACAATTTAATAGTTAACCATTAAGTTTTTAGCTTCTGACAATTTGAATCATTTCTTTAGT CTTATTAATTCCTTTATTTGACAGGGACGATTCTCAAGTCATACAGAACATTGTCAACGATGCTTTGCAAAAGCTGCTCC TGAGGTACCCTAATAAACTAGAAGGCCTTGTTGGAATTGAGAAACACTGTACAGATATTGGGTATATCCTGGGAAAAGTT GGAAGAATTGGAATTTGGGGGATGGGAGGTATAGGTAAGACAACCATTGCTAAAGCCATGTTTGCCAAACACTTCCCTCA ATATGACAGTGTGTGCTTCTTGGAAAACGTAAGAGAAGAGTCACAGAAGCACGGGCTAGCATATATCCGAGATAAGCTTC TCTTTGAGCTACTGAAGGAACAAGTTACAGCATCCAATATTTCTGGATCCACATTCGTGAAGAGAAGGCTCAGTAGCAGG AAAGTTTTCATTGTGATTGATGATGTGGACAGTTTTGAGCAATTAGAATATTTGTGTGAAGAATTCAGTGACTTGGGACA AGGTAGCGGTCTCATTGTAACAACAAGAGATAAACATTTGCTTCATGGAAGAGTTGAAAAGATATATGAGGTTGAGAAGT GGAACTTACAAAAATCGCTTGTGCTCTTCAGCTTAGCAGCCTTCAAGAAAAGCAAGCCTGAAAAGGGTTACGAGGATCTC TCCCGAAGGGCAGTTGAATATGCAGGAGGCGTTCCATTAGCTTTAAAAGTTTTGGGTTCACATTTTCGTTCCAGAGAAAC TCAGTTCTGGGAATCTGAGTTGAATTACTTGGAGAGCAAGAAGGAGCCCCTTAAGAAAATTCAAGAAGTGTTAAAGGTGA GCTATAATGGATTAGAAAGGAGGGATCTGCAGTCAATATTTCTGGACATTGCTTTCTTTTTCAAAGATGAAAATAAAGAT TCCGTCATAAAGATACTAGATGCTTGTGGTTTTAATGCTATTAGTGGAATAGAAATGCTTAAAGATAAAGCTCTTATAAG TATTTCAAACAGCAATATTATAGAAATGCATGACTTGCTACAAGAAATGGGTTTCGATATAGTTCGTAAAGACGTGACAG ACCCTGGAAGACGTAGCCGATTGAGGGATATTGAGGAAGTTAATAATGCACTTCAAAATGACGAGGTAAGAAAAGATACG CTAGACGTGTTTTCAATTAGAAATCATGGCGAATTTGCTACCTGATTTACTTATTTGCTGTCTTGACAGGTCCTTCCTGA AGTTGAAGGAATAAAGTTAGATTTGTCTCAGGCAGTAAACTTGCAGTTGAGTGATGACTTATTCAACAGGATGCCTAATT TAAGATTTCTTAGTTTATATGTCCCTGTGGGTAAGCAGAGATCAGCTGAAGTGCACTTCTATCCCGGACTCCTCCATAGG CAAGGTTCTGCTGGATTGAAGTATCTTGAGTGGAGTGGATACCCTTCAAAGTCTCTTCCACCAAATTTTTGTGCTAAGTT TCTTGTTGAGATTCGCATGCCACACAGCCATGTTAAAGAACTTTGGCAGGGGACGCAGGTAAAGATTCACATTTTCCTGT ATGCTTACATTTTCAGCTCAACTGAAAATATGAGATGACATTCCTTTTGAATTTGTGCAGGATCTTGTGAATTTAGAGAC AATTGACCTGAGTGAATGCAAACAGTTGGTGAAGCTCCCTGATTTGTCTAAAGCATCAAAACTCAAATGGGTTCATCTCT CCGGTTGTGAAAGTTTGTGTTTAGTTCATCTTTCATCTGTGGACACACTAGTTACTTTGATACTGGATAGGTGCAAAAAA CTGAAGAGTCTTAAAATTGAAAAGCATTTAAGCGATCTGCAGAACCTCAAAGTGGAGAACTGTTTCAGCCTCAAGGAATT TTCAGTGTCGTCCGATTCAATTCAATCGTTGGATTTAAGCAAAACAGGTGTCAAAAAATTGTACTCGTCAATCGGTCGGC TAAGCAAGCTTGTGTCCCTCAATCTAAATGGTTTGAGACTGCAGAATATTCCTAACGAGTTATCAGGCCTGACTTCTCTT GGGGCGCTATTCATTTCTAACTGCGGAGCAGTTGACAAAGAGAAGGTGCATGTCCTATGTGCTAGCTTACGATCCTTACG ATTTCTATATCTGATTAATTGTTATAAGTTGTTTGAACTCCCGGACAACATAAGTGCCTTGTCATCACTTTGTGAATTGA GGCTCGATGGAAGCAGTGTGAAGAAGTTACCTACAAGTATCAAGCTTCTTGAAAATCTGGAGGTTCTCTCCTTAAACTAT TGTAGGAAGCTTCAGTTTCTACCTCAGCTTCCACTGTTCATCCAAGAGCTTCGTATCATCAACTGTACCTCATTAGTGGC GGTATCTACTTTAAAGACCTTTGCAATCCAGATGAAGGGAAAGCAGAAAGACATTTCGTTTATGAATGGAATGAAACTGA ATGAACATTCGCTCCTCCGGATTATGGCAGACGCCGTGTTTACAATGAAGAGTGCTGCATTCCACCGTGTATATGTAAAA AGGTTTGGTTTCGATACTTACAATGACCATTATAACAGAGTTAGAGTTTGTCTACCTGCTGGAAACAGTGTCCCAGAGCT AGGGCCGTTGGCATATCGAACCACAGGGTCCTCAATTACCATTAGAAATCCTAGACCTTCGTCCAACTGGTTTGGCACCA TTTATTCTGTGGTTCTTTCTCCATCCGCTGGAATCAAGGGGCATTGTGCTAAAATCAAATGCCGAATCTATGGGAGAGTT GGTGTTTCGGGACAGAGGAGATGGAAGACTTCATCATTGTATGACAAAGACATAGGGGAGTTCAATTCAGATCATGTTTT TGTATGGGAAGGTTCAAGTCCGCATGTTTTTACTCACAATGATGAAAACATTGATTTTGTGTTCTCCGTTACAACTGAAA CTGGGGAAGATGATGAACTAATCAAAATAAAAGAGTGTGGGGTTCAACTAACATGTTTCTCAGATTCTGAGCTTCACAGA TTCTTACAGGAAACACTAGACTTGAAACCGCAGTTATCAGGTATGACCCTACTATATTAAATTTTGAATTTTCAAGTTTT CATAAATTGATATAATTTAATCATATTTATTTGAAATGGTTATTTATATGTTTTACGACTTCGGTACACTCATGATTAAA AATGATTTAAATTAATTTTATTGATGATGTGAATTGTTTACATCGAGTTTGAGAGTGAACAAATCGTGTCTATAGCGTTT CTTCTTTTTTCATTCATGGTGGTTGTTAAACACTCACTAAATAGTAAATACAGGCATGCAACTAAGGTAAAAGATGAACT AATCGTGTCCATGTGTTGCTGAACTGAGGCAACACTATACTATCGAAACTGCGAGAGGAGGACATAGATTTGTGTCTGAC AGTGGTTCTGAGCTTCTTCCAAATATCACAATTGAGGTTTGTTTCCATTGACTATTTCATATGCTATGTCATTTATTGAT GTTTCATTTTTCATTTCTCCTCTTTTTGGTATTAAGTATGTGAGTTTAAGCTGTGATTTGGGCGGTTGCAAGATGCAATA TTCATAAGTTGACTCTGAAAATCTTTATTGCAGAGTTACCCATTTTTTGTTCTGATGGGGTCTGCCCTGAGGGAAACCTG AATTAGGGGCAATATGACCTCTTATGTGGGGTTTATACGTCTGTTTTTGCTATGTTAGGTACAGTTCTAGAACACGCCTT AAGAACATATAATATTCTTTTAGCTGATTATTGTCACTTTATGTATGCCTTACTTTTGATTAAGTGCATAGAATTGATAA AAAACATCATACCAAGAATTGTTGCTGCACACTGAATTATTCACAGGGTATTTATGGTTAACTATATATATTAATAATGT TTTAAGAATTCTGATTAGTATTCTTAGTTTTTAGATTGAAATTTCAGCATCACTTGCCATTGGCATTGTTTCTGCGTGAG TTAAGCATTTTGTAAGTGTATTTGATCTGATTTTTACCATTGTTGAGATCTTTTTTTTTGCAGTTTGCATTTTTTTTATA AGCTTGCAGTTTGCATGTTTCCTCTTCTGAATCTTCACAGGTTATGGATCAAGCTATGGAGAATGGCCTTATTTTCATTG ATGGTTCTGGACCGACATACATTACTGCCACCGTAAGTGCCATGTTCATAACAATATCCTTCTTTCCCAAGCTCATATTG TTTGCCGAAAGCCATTATATTTTAGAAACTTTCTATTTAAGTTCATCATGGTAGAGATGAATTTATCCCATGAATACATC CTCATCGATACCAATTTGATTAAGTAATCTAGAATGGGATTAAGGATGGACAATTTAGCTTTGATTATCTTCTTTACTAT GAAATTAGTTTATTAGTTATTACTACTATGGAATTAATGCATTTGTATTCAGCTGAATCTTTTCTTTACTGTTTGGAATC AATAAGGTTGCGACGATGATGATGGCCACAAAAATATGGTCTGCAAGCTTATAAAGGTAGGACATATATGTTTTCAATTT CTTACCACTTGGAAAGTTATAGCGCAGTTTAGTATTAGCTTTATGGTTGAATGTTGCAGGTAGAGCCAAAGAATCCGAAT AAGGGAATGGTGGCAGATCTATGAAATAGCTATGCGATGGTTAGTCTCTAACTTCTTATTGTCTGAGTGAAGAACGTATT GCTTTTGTGTTCTCCTACCTTGAAAACAAAATTACTTTTCTTTTAATCATATATATTTCCCCATTTCAATAGTTGATAAG TCATGGATGATGGATGATATTACTTATTTGGGTACTTGCCAATCACTGTTAGAAATAATTGCTTTTGTCAGTTATGTTTC TTGCTTAAAGTGTTTTTAGAAGTCTGTTACAAAGTAAAGTGTCTTTACGGACTGTTACAAAGTAAAATTTCTTTAAGAGT CCGTTAGAAAGTCTAATGTTATTACTTATTACACTTTATTAGGAATTATTGAGTAAGCTTACATCTTGATATAATTGAAG TTTGCTTAATGTGTTTTCTACTGCACATCCTGATTTTTGTAACGTGTTTTCTACAGGAGGGAAAAGAAGAGAAGAATGTC AGACTTTGCACTGACTTTTGCATAAGATAACCATAGATAAAAGAAGGTCGGATAAGAAGAGCATGCTTTGAGTAAGAAGA GTGAGAGAATGAAGGAAGATTAAAATCTTCAAAGGAGTATAAAAAGACTCTGAGCACTTGATTTCTTTTATGTTGAGCAT TGATTTAATTTGTAACTGACTTGATTTCTTTTATCTTACTTTTCAAGTTACTTGAGTACTCTTAATCTTCTCTATTGACA TTGGTGTGTTATTTTTTCGGCTCCCCATAATGGCACTTTGTAGGGTTTTATTTACTTTTAATGTTTTTCGTCATTCGTGA GTACTAAGTACTTTATGTGATAAGAATAACGATGGTGCTTACATATGGTTCGATGCTCATTTGCGACAATGATATCAACA ACTCTAATAGTATTGTAAATGTAACTTACAAAAAAAAAAATCACAATGTCATATGAGTAAGTTTATTGCATCTTTATATA CAAAATTCCAATAACATTTCAATCCATTAAATCAAATTATACTCATGTAAGCATCTTTT
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0422400.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTCTTCTTTTTCTTCCAGTGTGGCTTCCCCAAAAAAGTTCGATGTTTTCATTAGTTTCAGGGGTGAGGACACCCGAGA TAACTTCACAAGCCATCTCCATGCTGCTCTCAGAGACAAGAATATCGTAACCTACATAGATGATCAGCTTAAAAGAGGAG ATGATGTTGGACTAGAGCTTGAAAAGGTAATCAAGAACTCGCTGATGTCTGTTGTGGTGTTCTCAGAAAGATACGCAACT TCAAAGTGGTGTTTGCAAGAATTGGTCATGATAACGAAATGCAGAAGAGACGAGGGACAGGTTGTTCTTCCAGTGTTCTA CAAAACAAATCCAACCGACGTGCGGAATCAGACAGGGAGTTATCAGAAACCATTTGAAGAATATGATCAAGCTGCAGCCG CTGGTGAAATTATAACCGATCAAGACAAAGTGGGTAGGTGGAGAGCTGCTCTCTCTGAAGCAGCCAATATATCTGGATGG GACTCAAGTACCCACAAGGACGATTCTCAAGTCATACAGAACATTGTCAACGATGCTTTGCAAAAGCTGCTCCTGAGGTA CCCTAATAAACTAGAAGGCCTTGTTGGAATTGAGAAACACTGTACAGATATTGGGTATATCCTGGGAAAAGTTGGAAGAA TTGGAATTTGGGGGATGGGAGGTATAGGTAAGACAACCATTGCTAAAGCCATGTTTGCCAAACACTTCCCTCAATATGAC AGTGTGTGCTTCTTGGAAAACGTAAGAGAAGAGTCACAGAAGCACGGGCTAGCATATATCCGAGATAAGCTTCTCTTTGA GCTACTGAAGGAACAAGTTACAGCATCCAATATTTCTGGATCCACATTCGTGAAGAGAAGGCTCAGTAGCAGGAAAGTTT TCATTGTGATTGATGATGTGGACAGTTTTGAGCAATTAGAATATTTGTGTGAAGAATTCAGTGACTTGGGACAAGGTAGC GGTCTCATTGTAACAACAAGAGATAAACATTTGCTTCATGGAAGAGTTGAAAAGATATATGAGGTTGAGAAGTGGAACTT ACAAAAATCGCTTGTGCTCTTCAGCTTAGCAGCCTTCAAGAAAAGCAAGCCTGAAAAGGGTTACGAGGATCTCTCCCGAA GGGCAGTTGAATATGCAGGAGGCGTTCCATTAGCTTTAAAAGTTTTGGGTTCACATTTTCGTTCCAGAGAAACTCAGTTC TGGGAATCTGAGTTGAATTACTTGGAGAGCAAGAAGGAGCCCCTTAAGAAAATTCAAGAAGTGTTAAAGGTGAGCTATAA TGGATTAGAAAGGAGGGATCTGCAGTCAATATTTCTGGACATTGCTTTCTTTTTCAAAGATGAAAATAAAGATTCCGTCA TAAAGATACTAGATGCTTGTGGTTTTAATGCTATTAGTGGAATAGAAATGCTTAAAGATAAAGCTCTTATAAGTATTTCA AACAGCAATATTATAGAAATGCATGACTTGCTACAAGAAATGGGTTTCGATATAGTTCGTAAAGACGTGACAGACCCTGG AAGACGTAGCCGATTGAGGGATATTGAGGAAGTTAATAATGCACTTCAAAATGACGAGGTCCTTCCTGAAGTTGAAGGAA TAAAGTTAGATTTGTCTCAGGCAGTAAACTTGCAGTTGAGTGATGACTTATTCAACAGGATGCCTAATTTAAGATTTCTT AGTTTATATGTCCCTGTGGGTAAGCAGAGATCAGCTGAAGTGCACTTCTATCCCGGACTCCTCCATAGGCAAGGTTCTGC TGGATTGAAGTATCTTGAGTGGAGTGGATACCCTTCAAAGTCTCTTCCACCAAATTTTTGTGCTAAGTTTCTTGTTGAGA TTCGCATGCCACACAGCCATGTTAAAGAACTTTGGCAGGGGACGCAGGATCTTGTGAATTTAGAGACAATTGACCTGAGT GAATGCAAACAGTTGGTGAAGCTCCCTGATTTGTCTAAAGCATCAAAACTCAAATGGGTTCATCTCTCCGGTTGTGAAAG TTTGTGTTTAGTTCATCTTTCATCTGTGGACACACTAGTTACTTTGATACTGGATAGGTGCAAAAAACTGAAGAGTCTTA AAATTGAAAAGCATTTAAGCGATCTGCAGAACCTCAAAGTGGAGAACTGTTTCAGCCTCAAGGAATTTTCAGTGTCGTCC GATTCAATTCAATCGTTGGATTTAAGCAAAACAGGTGTCAAAAAATTGTACTCGTCAATCGGTCGGCTAAGCAAGCTTGT GTCCCTCAATCTAAATGGTTTGAGACTGCAGAATATTCCTAACGAGTTATCAGGCCTGACTTCTCTTGGGGCGCTATTCA TTTCTAACTGCGGAGCAGTTGACAAAGAGAAGGTGCATGTCCTATGTGCTAGCTTACGATCCTTACGATTTCTATATCTG ATTAATTGTTATAAGTTGTTTGAACTCCCGGACAACATAAGTGCCTTGTCATCACTTTGTGAATTGAGGCTCGATGGAAG CAGTGTGAAGAAGTTACCTACAAGTATCAAGCTTCTTGAAAATCTGGAGGTTCTCTCCTTAAACTATTGTAGGAAGCTTC AGTTTCTACCTCAGCTTCCACTGTTCATCCAAGAGCTTCGTATCATCAACTGTACCTCATTAGTGGCGGTATCTACTTTA AAGACCTTTGCAATCCAGATGAAGGGAAAGCAGAAAGACATTTCGTTTATGAATGGAATGAAACTGAATGAACATTCGCT CCTCCGGATTATGGCAGACGCCGTGTTTACAATGAAGAGTGCTGCATTCCACCGTGTATATGTAAAAAGGTTTGGTTTCG ATACTTACAATGACCATTATAACAGAGTTAGAGTTTGTCTACCTGCTGGAAACAGTGTCCCAGAGCTAGGGCCGTTGGCA TATCGAACCACAGGGTCCTCAATTACCATTAGAAATCCTAGACCTTCGTCCAACTGGTTTGGCACCATTTATTCTGTGGT TCTTTCTCCATCCGCTGGAATCAAGGGGCATTGTGCTAAAATCAAATGCCGAATCTATGGGAGAGTTGGTGTTTCGGGAC AGAGGAGATGGAAGACTTCATCATTGTATGACAAAGACATAGGGGAGTTCAATTCAGATCATGTTTTTGTATGGGAAGGT TCAAGTCCGCATGTTTTTACTCACAATGATGAAAACATTGATTTTGTGTTCTCCGTTACAACTGAAACTGGGGAAGATGA TGAACTAATCAAAATAAAAGAGTGTGGGGTTCAACTAACATGTTTCTCAGATTCTGAGCTTCACAGATTCTTACAGGAAA CACTAGACTTGAAACCGCAGTTATCAGGCATGCAACTAAGGTAA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0422400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MSSFSSSVASPKKFDVFISFRGEDTRDNFTSHLHAALRDKNIVTYIDDQLKRGDDVGLELEKVIKNSLMSVVVFSERYAT SKWCLQELVMITKCRRDEGQVVLPVFYKTNPTDVRNQTGSYQKPFEEYDQAAAAGEIITDQDKVGRWRAALSEAANISGW DSSTHKDDSQVIQNIVNDALQKLLLRYPNKLEGLVGIEKHCTDIGYILGKVGRIGIWGMGGIGKTTIAKAMFAKHFPQYD SVCFLENVREESQKHGLAYIRDKLLFELLKEQVTASNISGSTFVKRRLSSRKVFIVIDDVDSFEQLEYLCEEFSDLGQGS GLIVTTRDKHLLHGRVEKIYEVEKWNLQKSLVLFSLAAFKKSKPEKGYEDLSRRAVEYAGGVPLALKVLGSHFRSRETQF WESELNYLESKKEPLKKIQEVLKVSYNGLERRDLQSIFLDIAFFFKDENKDSVIKILDACGFNAISGIEMLKDKALISIS NSNIIEMHDLLQEMGFDIVRKDVTDPGRRSRLRDIEEVNNALQNDEVLPEVEGIKLDLSQAVNLQLSDDLFNRMPNLRFL SLYVPVGKQRSAEVHFYPGLLHRQGSAGLKYLEWSGYPSKSLPPNFCAKFLVEIRMPHSHVKELWQGTQDLVNLETIDLS ECKQLVKLPDLSKASKLKWVHLSGCESLCLVHLSSVDTLVTLILDRCKKLKSLKIEKHLSDLQNLKVENCFSLKEFSVSS DSIQSLDLSKTGVKKLYSSIGRLSKLVSLNLNGLRLQNIPNELSGLTSLGALFISNCGAVDKEKVHVLCASLRSLRFLYL INCYKLFELPDNISALSSLCELRLDGSSVKKLPTSIKLLENLEVLSLNYCRKLQFLPQLPLFIQELRIINCTSLVAVSTL KTFAIQMKGKQKDISFMNGMKLNEHSLLRIMADAVFTMKSAAFHRVYVKRFGFDTYNDHYNRVRVCLPAGNSVPELGPLA YRTTGSSITIRNPRPSSNWFGTIYSVVLSPSAGIKGHCAKIKCRIYGRVGVSGQRRWKTSSLYDKDIGEFNSDHVFVWEG SSPHVFTHNDENIDFVFSVTTETGEDDELIKIKECGVQLTCFSDSELHRFLQETLDLKPQLSGMQLR
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11017
3 771 769 7.6E-229 –
SUPERFAMILY
SSF52200
3 160 158 7.06E-38
IPR035897
PANTHER
PTHR11017:SF260
3 771 769 7.6E-229 –
Gene3D
G3DSA:3.40.50.10140
8 184 177 3.2E-63
IPR035897
ProSiteProfiles
PS50104
12 157 146 25.119
IPR000157
Pfam
PF01582
13 190 178 9.3E-40
IPR000157
SMART
SM00255
13 157 145 7.6E-38
IPR000157
SUPERFAMILY
SSF52540
184 441 258 4.42E-50
IPR027417
Gene3D
G3DSA:3.40.50.300
185 340 156 9.2E-24 –
PRINTS
PR00364
213 228 16 2.0E-23 –
Pfam
PF00931
214 427 214 1.2E-24
IPR002182
PRINTS
PR00364
287 301 15 2.0E-23 –
PRINTS
PR00364
379 393 15 2.0E-23 –
SUPERFAMILY
SSF46785
416 503 88 2.39E-9
IPR036390
Gene3D
G3DSA:3.80.10.10
519 695 177 3.9E-16
IPR032675
SUPERFAMILY
SSF52058
536 874 339 1.16E-36 –
Pfam
PF07725
610 629 20 4.0E-5
IPR011713
PRINTS
PR00364
629 645 17 2.0E-23 –
Gene3D
G3DSA:3.80.10.10
696 888 193 3.6E-22
IPR032675

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of
GO:0007165
Biological process Signal transduction The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
Subterm of
Part of
GO:0043531
Molecular function ADP binding Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0422400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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