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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR013498
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 5 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.299s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj5g3v0611970.1
n.a. PREDICTED: DNA topoisomerase 1-like isoform X1 [Cicer arietinum] gi|502124515|ref|XP_004498560.1| chr5 7014265 7045164 +
2 domain predictions
4 GO terms
Lj5g3v0611970.2
n.a. PREDICTED: DNA topoisomerase 1-like isoform X1 [Cicer arietinum] gi|502124515|ref|XP_004498560.1| chr5 7014265 7045164 +
2 domain predictions
4 GO terms
LotjaGi1g1v0321800.1
n.a. DNA topoisomerase; TAIR: AT5G63920.1 topoisomerase 3alpha; Swiss-Prot: sp|Q9LVP1|TOP3A_ARATH DNA topoisomerase 3-alpha; TrEMBL-Plants: tr|A0A0S3RFA9|A0A0S3RFA9_PHAAN DNA topoisomerase; Found in the gene: LotjaGi1g1v0321800 LjG1.1_chr1 77276639 77301861 -
2 domain predictions
4 GO terms
LotjaGi5g1v0067100.1
n.a. DNA topoisomerase family protein; TAIR: AT4G31210.1 DNA topoisomerase, type IA, core; Swiss-Prot: sp|Q4UM42|TOP1_RICFE DNA topoisomerase 1; TrEMBL-Plants: tr|K7M6M6|K7M6M6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0067100 LjG1.1_chr5 11147606 11184746 +
2 domain predictions
4 GO terms
LotjaGi5g1v0067100.2
n.a. DNA topoisomerase family protein; TAIR: AT4G31210.1 DNA topoisomerase, type IA, core; Swiss-Prot: sp|Q4UM42|TOP1_RICFE DNA topoisomerase 1; TrEMBL-Plants: tr|K7M6M6|K7M6M6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0067100 LjG1.1_chr5 11148279 11184746 +
2 domain predictions
4 GO terms