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GO:0005694

View this GO term in other databases

Overview

Field Value
Namespace Cellular component
Short description Chromosome
Full defintion A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information.
Subterm of

Relationships

The relationship of GO:0005694 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

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Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
ISBN
Oxford Dictionary of Biochemistry and Molecular BiologyOxford Dictionary of Biochemistry and Molecular Biology

Anthony David Smith · ISBN: 0198547684

Oxford University Press, USA, 1997 · 762 pages

Arranged in A-to-Z order, the more than 17,000 entries provide basic information about fundamental, physiochemical laws, chemical compounds, constants, and formulae. The Dictionary also describes the essential features of some 2,000 enzymes and proteins, the reactions they catalyze and the functions they perform. These entries also include filenames to facilitate the location of entries in databases of sequences and definitions of 950 abbreviations and symbols. Designed for students, teachers, researchers and other professionals in any area of the biomedical sciences, the Dictionary has been fully updated anf revised to incorporate new information discovered since the original edition was published in 1997.

Associated Lotus transcripts 56

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
Lj0g3v0116299.1
– Meiotic recombination protein SPO11 [Medicago truncatula] gi|357494931|ref|XP_003617754.1|
GO terms
6
Lj0g3v0116299.3
– PREDICTED: meiotic recombination protein SPO11-1-like [Glycine max] gi|356499439|ref|XP_003518548.1|
GO terms
3
Lj0g3v0253289.1
– AT5G02820-like protein, partial [Capsella rubella] gi|345292731|gb|AEN82857.1|
GO terms
3
Lj0g3v0292879.1
– PREDICTED: meiotic recombination protein SPO11-1-like [Cicer arietinum] gi|502100203|ref|XP_004491659.1|
GO terms
6
Lj0g3v0292879.2
– Meiotic recombination protein SPO11 [Medicago truncatula] gi|357494931|ref|XP_003617754.1|
GO terms
6
Lj0g3v0329199.1
– PREDICTED: DNA topoisomerase 6 subunit A-like isoform 1 [Fragaria vesca subsp]. vesca] gi|470104330|ref|XP_004288560.1|
GO terms
3
Lj0g3v0352439.3
– Meiotic recombination protein SPO11 [Medicago truncatula] gi|357494931|ref|XP_003617754.1|
GO terms
3
Lj0g3v0358309.1
– PREDICTED: structural maintenance of chromosomes protein 2-1-like [Cicer arietinum] gi|502158009|ref|XP_004510992.1|
GO terms
4
Lj2g3v1695250.1
– PREDICTED: structural maintenance of chromosomes protein 1-like isoform X1 [Cicer arietinum] gi|502114983|ref|XP_004495097.1|
GO terms
4
Lj2g3v2051220.1
– PREDICTED: meiotic recombination protein SPO11-2-like isoform X2 [Cicer arietinum] gi|502159864|ref|XP_004511556.1|
GO terms
6
Lj2g3v2051220.2
– PREDICTED: meiotic recombination protein SPO11-2-like isoform X2 [Cicer arietinum] gi|502159864|ref|XP_004511556.1|
GO terms
6
Lj3g3v1917690.1
– PREDICTED: myosin-11-like [Cicer arietinum] gi|502159959|ref|XP_004511587.1|
GO terms
4
Lj3g3v1917690.2
– PREDICTED: myosin-11-like [Cicer arietinum] gi|502159959|ref|XP_004511587.1|
GO terms
4
Lj3g3v3639920.1
– Topoisomerase I [Pisum sativum] gi|2330649|emb|CAA74890.1|
GO terms
4
Lj3g3v3724440.1
– PREDICTED: structural maintenance of chromosomes protein 6-like [Cicer arietinum] gi|502168978|ref|XP_004514508.1|
GO terms
4
Lj4g3v1062150.1
– PREDICTED: structural maintenance of chromosomes protein 4-like [Glycine max] gi|356573489|ref|XP_003554891.1|
GO terms
4
Lj5g3v0611970.1
– PREDICTED: DNA topoisomerase 1-like isoform X1 [Cicer arietinum] gi|502124515|ref|XP_004498560.1|
GO terms
4
Lj5g3v0611970.2
– PREDICTED: DNA topoisomerase 1-like isoform X1 [Cicer arietinum] gi|502124515|ref|XP_004498560.1|
GO terms
4
Lj5g3v0615700.1
–
GO terms
5
Lj5g3v0615710.1
– PREDICTED: DNA topoisomerase 6 subunit A-like [Cicer arietinum] gi|502121820|ref|XP_004497452.1|
GO terms
8
Lj5g3v1073870.1
– PREDICTED: structural maintenance of chromosomes protein 1A-like [Glycine max] gi|356548057|ref|XP_003542420.1|
GO terms
4
Lj5g3v1073870.2
– PREDICTED: structural maintenance of chromosomes protein 1A-like [Glycine max] gi|356548057|ref|XP_003542420.1|
GO terms
4
Lj6g3v2172040.1
– RHL2 [Zea mays] gi|195647934|gb|ACG43435.1|
GO terms
3
LotjaGi1g1v0016700.1
– DNA topoisomerase 6 subunit A; TAIR: AT3G13170.1 Spo11/DNA topoisomerase VI, subunit A protein; Swiss-Prot: sp|Q9M4A2|SPO11_ARATH Meiotic recombination protein SPO11-1; TrEMBL-Plants: tr|G7K4J7|G7K4J7_MEDTR Meiotic recombination SPO11-like protein; Found in the gene: LotjaGi1g1v0016700
GO terms
4
LotjaGi1g1v0016700.2
– DNA topoisomerase 6 subunit A; TAIR: AT3G13170.1 Spo11/DNA topoisomerase VI, subunit A protein; Swiss-Prot: sp|Q9M4A2|SPO11_ARATH Meiotic recombination protein SPO11-1; TrEMBL-Plants: tr|G7K4J7|G7K4J7_MEDTR Meiotic recombination SPO11-like protein; Found in the gene: LotjaGi1g1v0016700
GO terms
4
LotjaGi1g1v0060900.1
– Structural maintenance of chromosomes protein; TAIR: AT2G27170.3 Structural maintenance of chromosomes (SMC) family protein; Swiss-Prot: sp|Q56YN8|SMC3_ARATH Structural maintenance of chromosomes protein 3; TrEMBL-Plants: tr|I1M7D7|I1M7D7_SOYBN Structural maintenance of chromosomes protein; Found in the gene: LotjaGi1g1v0060900
GO terms
4
LotjaGi1g1v0060900.2
– Structural maintenance of chromosomes protein; TAIR: AT2G27170.3 Structural maintenance of chromosomes (SMC) family protein; Swiss-Prot: sp|Q56YN8|SMC3_ARATH Structural maintenance of chromosomes protein 3; TrEMBL-Plants: tr|I1M7D7|I1M7D7_SOYBN Structural maintenance of chromosomes protein; Found in the gene: LotjaGi1g1v0060900
GO terms
4
LotjaGi1g1v0060900.4
– Structural maintenance of chromosomes protein; TAIR: AT2G27170.3 Structural maintenance of chromosomes (SMC) family protein; Swiss-Prot: sp|Q56YN8|SMC3_ARATH Structural maintenance of chromosomes protein 3; TrEMBL-Plants: tr|I1M7D7|I1M7D7_SOYBN Structural maintenance of chromosomes protein; Found in the gene: LotjaGi1g1v0060900
GO terms
4
LotjaGi1g1v0321800.1
– DNA topoisomerase; TAIR: AT5G63920.1 topoisomerase 3alpha; Swiss-Prot: sp|Q9LVP1|TOP3A_ARATH DNA topoisomerase 3-alpha; TrEMBL-Plants: tr|A0A0S3RFA9|A0A0S3RFA9_PHAAN DNA topoisomerase; Found in the gene: LotjaGi1g1v0321800
GO terms
4
LotjaGi1g1v0663600.1
– DNA gyrase subunit B; TAIR: AT5G04130.1 DNA GYRASE B2; Swiss-Prot: sp|Q5YLB4|GYRB_NICBE DNA gyrase subunit B, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A151TTM7|A0A151TTM7_CAJCA DNA gyrase subunit B; Found in the gene: LotjaGi1g1v0663600
GO terms
5
LotjaGi2g1v0064900.1
– DNA gyrase subunit A; TAIR: AT3G10690.1 DNA GYRASE A; Swiss-Prot: sp|Q5YLB5|GYRA_NICBE DNA gyrase subunit A, chloroplastic/mitochondrial; TrEMBL-Plants: tr|G7I9Z9|G7I9Z9_MEDTR DNA gyrase subunit A; Found in the gene: LotjaGi2g1v0064900
GO terms
5
LotjaGi2g1v0088900_LC.1
– DNA topoisomerase 6 subunit A; TAIR: AT5G02820.1 Spo11/DNA topoisomerase VI, subunit A protein; Swiss-Prot: sp|A2XFC1|TOP6A_ORYSI DNA topoisomerase 6 subunit A3; TrEMBL-Plants: tr|A0A061R4D2|A0A061R4D2_9CHLO DNA topoisomerase 6 subunit A; Found in the gene: LotjaGi2g1v0088900_LC
GO terms
7
LotjaGi2g1v0088900_LC.4
– DNA topoisomerase 6 subunit A; TAIR: AT5G02820.1 Spo11/DNA topoisomerase VI, subunit A protein; Swiss-Prot: sp|Q9LZ03|TOP6A_ARATH DNA topoisomerase 6 subunit A; TrEMBL-Plants: tr|A0A061R4D2|A0A061R4D2_9CHLO DNA topoisomerase 6 subunit A; Found in the gene: LotjaGi2g1v0088900_LC
GO terms
7
LotjaGi2g1v0088900_LC.5
– DNA topoisomerase 6 subunit A; TAIR: AT5G02820.1 Spo11/DNA topoisomerase VI, subunit A protein; Swiss-Prot: sp|A2XFC1|TOP6A_ORYSI DNA topoisomerase 6 subunit A3; TrEMBL-Plants: tr|A0A061R4D2|A0A061R4D2_9CHLO DNA topoisomerase 6 subunit A; Found in the gene: LotjaGi2g1v0088900_LC
GO terms
4
LotjaGi2g1v0436400.1
– DNA topoisomerase 6 subunit A; TAIR: AT1G63990.1 sporulation 11-2; Swiss-Prot: sp|Q9M4A1|SPO12_ARATH Meiotic recombination protein SPO11-2; TrEMBL-Plants: tr|I1LGD2|I1LGD2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0436400
GO terms
7
LotjaGi2g1v0436400.2
– DNA topoisomerase 6 subunit A; TAIR: AT1G63990.1 sporulation 11-2; Swiss-Prot: sp|Q9M4A1|SPO12_ARATH Meiotic recombination protein SPO11-2; TrEMBL-Plants: tr|G7KC02|G7KC02_MEDTR Meiotic recombination SPO11-like protein; Found in the gene: LotjaGi2g1v0436400
GO terms
7
LotjaGi2g1v0436400.3
– DNA topoisomerase 6 subunit A; TAIR: AT1G63990.2 sporulation 11-2; Swiss-Prot: sp|Q9M4A1|SPO12_ARATH Meiotic recombination protein SPO11-2; TrEMBL-Plants: tr|I1LGD2|I1LGD2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0436400
GO terms
7
LotjaGi2g1v0436400.4
– DNA topoisomerase 6 subunit A; TAIR: AT1G63990.1 sporulation 11-2; Swiss-Prot: sp|Q9M4A1|SPO12_ARATH Meiotic recombination protein SPO11-2; TrEMBL-Plants: tr|I1LGD2|I1LGD2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0436400
GO terms
7
LotjaGi2g1v0436400.5
– DNA topoisomerase 6 subunit A; TAIR: AT1G63990.1 sporulation 11-2; Swiss-Prot: sp|Q9M4A1|SPO12_ARATH Meiotic recombination protein SPO11-2; TrEMBL-Plants: tr|K7LMM4|K7LMM4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0436400
GO terms
4
LotjaGi2g1v0436400.6
– DNA topoisomerase 6 subunit A; TAIR: AT1G63990.1 sporulation 11-2; Swiss-Prot: sp|Q9M4A1|SPO12_ARATH Meiotic recombination protein SPO11-2; TrEMBL-Plants: tr|K7LMM4|K7LMM4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0436400
GO terms
7
LotjaGi3g1v0061500.1
– Structural maintenance of chromosomes protein; TAIR: AT5G62410.1 structural maintenance of chromosomes 2; Swiss-Prot: sp|Q9C5Y4|SMC21_ARATH Structural maintenance of chromosomes protein 2-1; TrEMBL-Plants: tr|A0A072TZX1|A0A072TZX1_MEDTR Structural maintenance of chromosomes protein; Found in the gene: LotjaGi3g1v0061500
GO terms
4
LotjaGi3g1v0544200.1
– DNA topoisomerase 1; TAIR: AT5G55310.1 DNA topoisomerase 1 beta; Swiss-Prot: sp|Q9FJ79|TOP1B_ARATH DNA topoisomerase 1 beta; TrEMBL-Plants: tr|I1LP26|I1LP26_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0544200
GO terms
4
LotjaGi3g1v0544200.2
– DNA topoisomerase 1; TAIR: AT5G55310.1 DNA topoisomerase 1 beta; Swiss-Prot: sp|Q9FJ79|TOP1B_ARATH DNA topoisomerase 1 beta; TrEMBL-Plants: tr|A0A1J7GEG9|A0A1J7GEG9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0544200
GO terms
4
LotjaGi3g1v0552100.1
– Structural maintenance of chromosomes family protein; TAIR: AT5G07660.1 structural maintenance of chromosomes 6A; Swiss-Prot: sp|Q9FLR5|SMC6A_ARATH Structural maintenance of chromosomes protein 6A; TrEMBL-Plants: tr|A0A0S3SER5|A0A0S3SER5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0552100
GO terms
4
LotjaGi4g1v0139100.1
– Structural maintenance of chromosomes protein; TAIR: AT5G48600.2 structural maintenance of chromosome 3; Swiss-Prot: sp|Q9FJL0|SMC4_ARATH Structural maintenance of chromosomes protein 4; TrEMBL-Plants: tr|A0A151RK13|A0A151RK13_CAJCA Structural maintenance of chromosomes protein 4; Found in the gene: LotjaGi4g1v0139100
GO terms
4
LotjaGi4g1v0139100.3
– Structural maintenance of chromosomes protein; TAIR: AT5G48600.2 structural maintenance of chromosome 3; Swiss-Prot: sp|Q9FJL0|SMC4_ARATH Structural maintenance of chromosomes protein 4; TrEMBL-Plants: tr|A0A151RK13|A0A151RK13_CAJCA Structural maintenance of chromosomes protein 4; Found in the gene: LotjaGi4g1v0139100
GO terms
4
LotjaGi4g1v0139100.4
– Structural maintenance of chromosomes protein; TAIR: AT5G48600.2 structural maintenance of chromosome 3; Swiss-Prot: sp|Q9FJL0|SMC4_ARATH Structural maintenance of chromosomes protein 4; TrEMBL-Plants: tr|A0A151RK13|A0A151RK13_CAJCA Structural maintenance of chromosomes protein 4; Found in the gene: LotjaGi4g1v0139100
GO terms
4
LotjaGi4g1v0139100.5
– Structural maintenance of chromosomes protein; TAIR: AT5G48600.2 structural maintenance of chromosome 3; Swiss-Prot: sp|Q9FJL0|SMC4_ARATH Structural maintenance of chromosomes protein 4; TrEMBL-Plants: tr|A0A151RK13|A0A151RK13_CAJCA Structural maintenance of chromosomes protein 4; Found in the gene: LotjaGi4g1v0139100
GO terms
4
LotjaGi4g1v0139100.6
– Structural maintenance of chromosomes protein; TAIR: AT5G48600.2 structural maintenance of chromosome 3; Swiss-Prot: sp|Q9FJL0|SMC4_ARATH Structural maintenance of chromosomes protein 4; TrEMBL-Plants: tr|K7LXH6|K7LXH6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0139100
GO terms
4
LotjaGi5g1v0067100.1
– DNA topoisomerase family protein; TAIR: AT4G31210.1 DNA topoisomerase, type IA, core; Swiss-Prot: sp|Q4UM42|TOP1_RICFE DNA topoisomerase 1; TrEMBL-Plants: tr|K7M6M6|K7M6M6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0067100
GO terms
4
LotjaGi5g1v0067100.2
– DNA topoisomerase family protein; TAIR: AT4G31210.1 DNA topoisomerase, type IA, core; Swiss-Prot: sp|Q4UM42|TOP1_RICFE DNA topoisomerase 1; TrEMBL-Plants: tr|K7M6M6|K7M6M6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0067100
GO terms
4
LotjaGi5g1v0072800.1
– DNA topoisomerase 6 subunit A; TAIR: AT5G02820.1 Spo11/DNA topoisomerase VI, subunit A protein; Swiss-Prot: sp|Q9LZ03|TOP6A_ARATH DNA topoisomerase 6 subunit A; TrEMBL-Plants: tr|A0A068F783|A0A068F783_LOTJA DNA topoisomerase 6 subunit A; Found in the gene: LotjaGi5g1v0072800
GO terms
9
LotjaGi5g1v0181700.3
– Structural maintenance of chromosomes protein; TAIR: AT3G54670.1 Structural maintenance of chromosomes (SMC) family protein; Swiss-Prot: sp|Q6Q1P4|SMC1_ARATH Structural maintenance of chromosomes protein 1; TrEMBL-Plants: tr|A0A0B2P8J7|A0A0B2P8J7_GLYSO Structural maintenance of chromosomes protein; Found in the gene: LotjaGi5g1v0181700
GO terms
4
LotjaGi5g1v0181700.4
– Structural maintenance of chromosomes protein; TAIR: AT3G54670.1 Structural maintenance of chromosomes (SMC) family protein; Swiss-Prot: sp|Q6Q1P4|SMC1_ARATH Structural maintenance of chromosomes protein 1; TrEMBL-Plants: tr|I1LYK3|I1LYK3_SOYBN Structural maintenance of chromosomes protein; Found in the gene: LotjaGi5g1v0181700
GO terms
4
LotjaGi5g1v0181700.5
– Structural maintenance of chromosomes protein; TAIR: AT3G54670.1 Structural maintenance of chromosomes (SMC) family protein; Swiss-Prot: sp|Q6Q1P4|SMC1_ARATH Structural maintenance of chromosomes protein 1; TrEMBL-Plants: tr|A0A0S3SR98|A0A0S3SR98_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0181700
GO terms
4
LotjaGi6g1v0346800.1
– DNA topoisomerase 6 subunit A; TAIR: AT5G02820.1 Spo11/DNA topoisomerase VI, subunit A protein; Swiss-Prot: sp|A2XFC1|TOP6A_ORYSI DNA topoisomerase 6 subunit A3; TrEMBL-Plants: tr|I1H6P7|I1H6P7_BRADI DNA topoisomerase 6 subunit A; Found in the gene: LotjaGi6g1v0346800
GO terms
9

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0016889
Molecular function Endodeoxyribonuclease activity, producing 3'-phosphomonoesters 1 1.79