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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR014352
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 15 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.489s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v0998730.1
n.a. PREDICTED: acyl-CoA-binding domain-containing protein 2-like [Glycine max] gi|356509224|ref|XP_003523351.1| chr1 12659912 12665557 +
2 domain predictions
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Lj2g3v0836910.1
n.a. PREDICTED: kinesin-like calmodulin-binding protein homolog [Glycine max] gi|356531307|ref|XP_003534219.1| chr2 13018688 13024712 +
2 domain predictions
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Lj2g3v1549720.1
n.a. acyl-CoA-binding protein [Camellia sinensis] gi|330318654|gb|AEC10987.1| chr2 24384659 24386778 +
2 domain predictions
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Lj2g3v1572000.1
n.a. PREDICTED: kinesin-like calmodulin-binding protein homolog [Glycine max] gi|356540898|ref|XP_003538921.1| chr2 24979427 24986911 +
2 domain predictions
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Lj5g3v0308430.1
n.a. PREDICTED: acyl-CoA-binding domain-containing protein 3-like [Cicer arietinum] gi|502125647|ref|XP_004499010.1| chr5 2870454 2875350 -
2 domain predictions
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Lj5g3v0308440.1
n.a. PREDICTED: acyl-CoA-binding domain-containing protein 3-like [Cicer arietinum] gi|502125647|ref|XP_004499010.1| chr5 2871035 2875350 -
2 domain predictions
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Lj5g3v1496800.1
n.a. Acyl-CoA-binding domain-containing protein [Medicago truncatula] gi|357511945|ref|XP_003626261.1| chr5 21744065 21744934 -
2 domain predictions
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LotjaGi1g1v0289200.1
n.a. Acyl-CoA-binding domain protein; TAIR: AT4G27780.1 acyl-CoA binding protein 2; Swiss-Prot: sp|Q9STP8|ACBP2_ARATH Acyl-CoA-binding domain-containing protein 2; TrEMBL-Plants: tr|I1KAV2|I1KAV2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0289200 LjG1.1_chr1 70080517 70086426 -
2 domain predictions
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LotjaGi2g1v0351000.1
n.a. Kinesin-like protein; TAIR: AT5G65930.2 kinesin-like calmodulin-binding protein (ZWICHEL); Swiss-Prot: sp|Q7XPJ0|KN14I_ORYSJ Kinesin-like protein KIN-14I; TrEMBL-Plants: tr|I1J891|I1J891_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0351000 LjG1.1_chr2 82734093 82743835 +
2 domain predictions
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LotjaGi2g1v0351000.2
n.a. Kinesin-like protein; TAIR: AT5G65930.2 kinesin-like calmodulin-binding protein (ZWICHEL); Swiss-Prot: sp|Q7XPJ0|KN14I_ORYSJ Kinesin-like protein KIN-14I; TrEMBL-Plants: tr|I1J891|I1J891_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0351000 LjG1.1_chr2 82734941 82743560 +
2 domain predictions
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LotjaGi4g1v0141300.1
n.a. Kinesin-like protein; TAIR: AT5G65930.2 kinesin-like calmodulin-binding protein (ZWICHEL); Swiss-Prot: sp|Q7XPJ0|KN14I_ORYSJ Kinesin-like protein KIN-14I; TrEMBL-Plants: tr|I1L4M5|I1L4M5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0141300 LjG1.1_chr4 21514494 21530142 -
2 domain predictions
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LotjaGi4g1v0141300.2
n.a. Kinesin-like protein; TAIR: AT5G65930.2 kinesin-like calmodulin-binding protein (ZWICHEL); Swiss-Prot: sp|Q7XPJ0|KN14I_ORYSJ Kinesin-like protein KIN-14I; TrEMBL-Plants: tr|G7L7W2|G7L7W2_MEDTR Kinesin-like calmodulin-binding protein; Found in the gene: LotjaGi4g1v0141300 LjG1.1_chr4 21514800 21529320 -
2 domain predictions
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LotjaGi5g1v0032200.1
n.a. Acyl-CoA-binding domain protein; TAIR: AT4G24230.6 acyl-CoA-binding domain 3; Swiss-Prot: sp|Q9STX1|ACBP3_ARATH Acyl-CoA-binding domain-containing protein 3; TrEMBL-Plants: tr|A0A072VPF6|A0A072VPF6_MEDTR Acyl-CoA-binding domain protein; Found in the gene: LotjaGi5g1v0032200 LjG1.1_chr5 5320078 5325895 -
2 domain predictions
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LotjaGi5g1v0032200.2
n.a. Acyl-CoA-binding domain protein; TAIR: AT4G24230.6 acyl-CoA-binding domain 3; Swiss-Prot: sp|Q9STX1|ACBP3_ARATH Acyl-CoA-binding domain-containing protein 3; TrEMBL-Plants: tr|A0A072VPF6|A0A072VPF6_MEDTR Acyl-CoA-binding domain protein; Found in the gene: LotjaGi5g1v0032200 LjG1.1_chr5 5320078 5325895 -
2 domain predictions
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LotjaGi5g1v0222400.1
n.a. Acyl-CoA-binding domain-containing protein 4; TAIR: AT3G05420.2 acyl-CoA binding protein 4; Swiss-Prot: sp|Q9MA55|ACBP4_ARATH Acyl-CoA-binding domain-containing protein 4; TrEMBL-Plants: tr|A0A0B2QFE8|A0A0B2QFE8_GLYSO Acyl-CoA-binding domain-containing protein 4; Found in the gene: LotjaGi5g1v0222400 LjG1.1_chr5 52930381 52939389 +
2 domain predictions
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