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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR017730
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 15 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.079s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v1818790.2
n.a. PREDICTED: chaperone protein ClpB4, mitochondrial-like [Cicer arietinum] gi|502132470|ref|XP_004501376.1| chr1 22133777 22140923 -
2 domain predictions
3 GO terms
Lj1g3v2996640.1
n.a. PREDICTED: chaperone protein ClpB3, chloroplastic-like isoform X1 [Cicer arietinum] gi|502101806|ref|XP_004491878.1| chr1 34124969 34132072 -
2 domain predictions
3 GO terms
Lj1g3v2996640.2
n.a. PREDICTED: chaperone protein ClpB3, chloroplastic-like isoform X2 [Cicer arietinum] gi|502101810|ref|XP_004491879.1| chr1 34124969 34131041 -
2 domain predictions
3 GO terms
Lj2g3v1069410.1
n.a. Chaperone protein clpB [Medicago truncatula] gi|357496641|ref|XP_003618609.1| chr2 17440851 17451912 -
2 domain predictions
3 GO terms
Lj2g3v1069410.2
n.a. Chaperone protein clpB [Medicago truncatula] gi|357496641|ref|XP_003618609.1| chr2 17440851 17451459 -
2 domain predictions
3 GO terms
LotjaGi1g1v0378600.1
n.a. ATP-dependent chaperone ClpB; TAIR: AT2G25140.1 casein lytic proteinase B4; Swiss-Prot: sp|Q8VYJ7|CLPB4_ARATH Chaperone protein ClpB4, mitochondrial; TrEMBL-Plants: tr|I1JU82|I1JU82_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0378600 LjG1.1_chr1 85840257 85852851 -
2 domain predictions
3 GO terms
LotjaGi1g1v0509100.1
n.a. ATP-dependent chaperone ClpB; TAIR: AT5G15450.1 casein lytic proteinase B3; Swiss-Prot: sp|Q9LF37|CLPB3_ARATH Chaperone protein ClpB3, chloroplastic; TrEMBL-Plants: tr|A0A151TCE6|A0A151TCE6_CAJCA Chaperone protein clpB 2; Found in the gene: LotjaGi1g1v0509100 LjG1.1_chr1 102813727 102820891 -
2 domain predictions
3 GO terms
LotjaGi1g1v0509100.3
n.a. Chaperone clpb, putative; TAIR: AT5G15450.1 casein lytic proteinase B3; Swiss-Prot: sp|Q9LF37|CLPB3_ARATH Chaperone protein ClpB3, chloroplastic; TrEMBL-Plants: tr|A0A1J7HJB5|A0A1J7HJB5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0509100 LjG1.1_chr1 102813964 102819645 -
2 domain predictions
3 GO terms
LotjaGi1g1v0509100.4
n.a. ATP-dependent chaperone ClpB; TAIR: AT5G15450.1 casein lytic proteinase B3; Swiss-Prot: sp|Q9LF37|CLPB3_ARATH Chaperone protein ClpB3, chloroplastic; TrEMBL-Plants: tr|A0A072U702|A0A072U702_MEDTR Casein lytic proteinase B3; Found in the gene: LotjaGi1g1v0509100 LjG1.1_chr1 102813964 102819967 -
2 domain predictions
3 GO terms
LotjaGi1g1v0509100.5
n.a. ATP-dependent chaperone ClpB; TAIR: AT5G15450.1 casein lytic proteinase B3; Swiss-Prot: sp|Q9LF37|CLPB3_ARATH Chaperone protein ClpB3, chloroplastic; TrEMBL-Plants: tr|A0A072U702|A0A072U702_MEDTR Casein lytic proteinase B3; Found in the gene: LotjaGi1g1v0509100 LjG1.1_chr1 102813964 102819968 -
2 domain predictions
3 GO terms
LotjaGi2g1v0264100.1
n.a. ATP-dependent chaperone ClpB; TAIR: AT5G15450.1 casein lytic proteinase B3; Swiss-Prot: sp|Q9LF37|CLPB3_ARATH Chaperone protein ClpB3, chloroplastic; TrEMBL-Plants: tr|G7KLS1|G7KLS1_MEDTR Chaperone protein ClpB3; Found in the gene: LotjaGi2g1v0264100 LjG1.1_chr2 73346134 73357894 -
2 domain predictions
3 GO terms
LotjaGi2g1v0264100.2
n.a. ATP-dependent chaperone ClpB; TAIR: AT5G15450.1 casein lytic proteinase B3; Swiss-Prot: sp|Q9LF37|CLPB3_ARATH Chaperone protein ClpB3, chloroplastic; TrEMBL-Plants: tr|G7KLS1|G7KLS1_MEDTR Chaperone protein ClpB3; Found in the gene: LotjaGi2g1v0264100 LjG1.1_chr2 73346757 73357132 -
2 domain predictions
3 GO terms
LotjaGi2g1v0264100.3
n.a. ATP-dependent chaperone ClpB; TAIR: AT5G15450.1 casein lytic proteinase B3; Swiss-Prot: sp|Q9LF37|CLPB3_ARATH Chaperone protein ClpB3, chloroplastic; TrEMBL-Plants: tr|G7KLS1|G7KLS1_MEDTR Chaperone protein ClpB3; Found in the gene: LotjaGi2g1v0264100 LjG1.1_chr2 73346757 73357140 -
2 domain predictions
3 GO terms
LotjaGi2g1v0264100.6
n.a. ATP-dependent chaperone ClpB; TAIR: AT5G15450.1 casein lytic proteinase B3; Swiss-Prot: sp|Q9LF37|CLPB3_ARATH Chaperone protein ClpB3, chloroplastic; TrEMBL-Plants: tr|G7KLS1|G7KLS1_MEDTR Chaperone protein ClpB3; Found in the gene: LotjaGi2g1v0264100 LjG1.1_chr2 73346920 73356817 -
2 domain predictions
3 GO terms
LotjaGi2g1v0264100.7
n.a. ATP-dependent chaperone ClpB; TAIR: AT5G15450.1 casein lytic proteinase B3; Swiss-Prot: sp|Q9LF37|CLPB3_ARATH Chaperone protein ClpB3, chloroplastic; TrEMBL-Plants: tr|G7KLS1|G7KLS1_MEDTR Chaperone protein ClpB3; Found in the gene: LotjaGi2g1v0264100 LjG1.1_chr2 73346920 73357140 -
2 domain predictions
3 GO terms