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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2996640 |
| Transcript ID | Lj1g3v2996640.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: chaperone protein ClpB3, chloroplastic-like isoform X2 [Cicer arietinum] gi|502101810|ref|XP_004491879.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 900 | 900 | 0 | – | |
| PANTHER | 1 | 900 | 900 | 0 | – | |
| Gene3D | 8 | 151 | 144 | 5.10E-41 | ||
| SUPERFAMILY | 9 | 160 | 152 | 9.22E-36 | ||
| TIGRFAM | 10 | 862 | 853 | 0 | ||
| Pfam | 23 | 72 | 50 | 4.50E-15 | ||
| Pfam | 98 | 149 | 52 | 1.40E-09 | ||
| Gene3D | 163 | 346 | 184 | 2.40E-51 | ||
| SUPERFAMILY | 163 | 553 | 391 | 1.06E-98 | ||
| CDD | 185 | 340 | 156 | 2.60E-22 | – | |
| SMART | 202 | 346 | 145 | 3.20E-10 | ||
| Pfam | 207 | 339 | 133 | 2.50E-13 | ||
| ProSitePatterns | 298 | 310 | 13 | – | ||
| Gene3D | 347 | 430 | 84 | 7.10E-33 | – | |
| Coils | 438 | 465 | 28 | – | – | |
| Coils | 476 | 496 | 21 | – | – | |
| Coils | 503 | 537 | 35 | – | – | |
| SUPERFAMILY | 554 | 860 | 307 | 9.52E-82 | ||
| Gene3D | 558 | 789 | 232 | 2.90E-58 | ||
| CDD | 579 | 727 | 149 | 3.51E-18 | – | |
| Pfam | 604 | 772 | 169 | 4.60E-56 | ||
| SMART | 605 | 780 | 176 | 1.60E-08 | ||
| PRINTS | 609 | 627 | 19 | 2.50E-40 | ||
| ProSitePatterns | 639 | 657 | 19 | – | ||
| PRINTS | 654 | 672 | 19 | 2.50E-40 | ||
| PRINTS | 683 | 701 | 19 | 2.50E-40 | ||
| PRINTS | 716 | 730 | 15 | 2.50E-40 | ||
| SMART | 779 | 865 | 87 | 2.80E-33 | ||
| Pfam | 779 | 858 | 80 | 2.70E-25 | ||
| Gene3D | 790 | 862 | 73 | 1.70E-29 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Cytoplasm | All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. | ||
| Biological process | Response to heat | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism. | ||
| Biological process | Protein refolding | The process carried out by a cell that restores the biological activity of an unfolded or misfolded protein, using helper proteins such as chaperones. |
Expression pattern of Lj1g3v2996640.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2996640.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.