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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2996640 |
| Transcript ID | Lj1g3v2996640.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: chaperone protein ClpB3, chloroplastic-like isoform X1 [Cicer arietinum] gi|502101806|ref|XP_004491878.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 72 | 972 | 901 | 0 | – | |
| PANTHER | 72 | 972 | 901 | 0 | – | |
| Gene3D | 80 | 223 | 144 | 6.30E-41 | ||
| SUPERFAMILY | 81 | 232 | 152 | 1.08E-35 | ||
| TIGRFAM | 82 | 934 | 853 | 0 | ||
| Pfam | 95 | 144 | 50 | 5.00E-15 | ||
| Pfam | 170 | 221 | 52 | 1.60E-09 | ||
| Gene3D | 235 | 418 | 184 | 2.70E-51 | ||
| SUPERFAMILY | 235 | 625 | 391 | 1.29E-98 | ||
| CDD | 257 | 412 | 156 | 1.93E-22 | – | |
| SMART | 274 | 418 | 145 | 3.20E-10 | ||
| Pfam | 279 | 411 | 133 | 2.70E-13 | ||
| ProSitePatterns | 370 | 382 | 13 | – | ||
| Gene3D | 419 | 502 | 84 | 7.90E-33 | – | |
| Coils | 510 | 537 | 28 | – | – | |
| Coils | 548 | 568 | 21 | – | – | |
| Coils | 575 | 609 | 35 | – | – | |
| SUPERFAMILY | 626 | 932 | 307 | 1.13E-81 | ||
| Gene3D | 630 | 861 | 232 | 3.40E-58 | ||
| CDD | 651 | 799 | 149 | 3.02E-18 | – | |
| Pfam | 676 | 844 | 169 | 5.20E-56 | ||
| SMART | 677 | 852 | 176 | 1.60E-08 | ||
| PRINTS | 681 | 699 | 19 | 3.30E-40 | ||
| ProSitePatterns | 711 | 729 | 19 | – | ||
| PRINTS | 726 | 744 | 19 | 3.30E-40 | ||
| PRINTS | 755 | 773 | 19 | 3.30E-40 | ||
| PRINTS | 788 | 802 | 15 | 3.30E-40 | ||
| SMART | 851 | 937 | 87 | 2.80E-33 | ||
| Pfam | 851 | 930 | 80 | 3.00E-25 | ||
| Gene3D | 862 | 934 | 73 | 1.90E-29 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Cytoplasm | All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. | ||
| Biological process | Response to heat | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism. | ||
| Biological process | Protein refolding | The process carried out by a cell that restores the biological activity of an unfolded or misfolded protein, using helper proteins such as chaperones. |
Expression pattern of Lj1g3v2996640.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2996640.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.