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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR018124
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 10 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.667s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v1387030.1
n.a. PREDICTED: calnexin homolog [Glycine max] gi|356508884|ref|XP_003523183.1| chr1 17111206 17114366 -
4 domain predictions
1 GO term
Lj1g3v2839220.2
n.a. Calreticulin-3 [Medicago truncatula] gi|357507831|ref|XP_003624204.1| chr1 32323355 32328933 -
3 domain predictions
1 GO term
Lj4g3v2861680.1
n.a. PREDICTED: calnexin homolog isoform X2 [Cicer arietinum] gi|502139546|ref|XP_004503810.1| chr4 38353254 38356310 -
4 domain predictions
1 GO term
Lj5g3v1514670.1
n.a. Calreticulin [Medicago truncatula] gi|357441869|ref|XP_003591212.1| chr5 22085256 22088618 -
3 domain predictions
1 GO term
LotjaGi1g1v0331500.1
n.a. Calreticulin/calnexin; TAIR: AT5G61790.1 calnexin 1; Swiss-Prot: sp|Q39817|CALX_SOYBN Calnexin homolog; TrEMBL-Plants: tr|A0A0R0KAL0|A0A0R0KAL0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0331500 LjG1.1_chr1 78806508 78810150 -
4 domain predictions
1 GO term
LotjaGi1g1v0487200.1
n.a. Calreticulin; TAIR: AT1G08450.1 calreticulin 3; Swiss-Prot: sp|O04153|CALR3_ARATH Calreticulin-3; TrEMBL-Plants: tr|V7B1D3|V7B1D3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0487200 LjG1.1_chr1 100019208 100030578 -
3 domain predictions
1 GO term
LotjaGi3g1v0500600.1
n.a. Calreticulin; TAIR: AT1G08450.1 calreticulin 3; Swiss-Prot: sp|O04153|CALR3_ARATH Calreticulin-3; TrEMBL-Plants: tr|I3SD85|I3SD85_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0500600 LjG1.1_chr3 91879160 91886842 -
2 domain predictions
1 GO term
LotjaGi3g1v0500600.2
n.a. Calreticulin; TAIR: AT1G08450.1 calreticulin 3; Swiss-Prot: sp|O04153|CALR3_ARATH Calreticulin-3; TrEMBL-Plants: tr|I3SD85|I3SD85_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0500600 LjG1.1_chr3 91882283 91886562 -
2 domain predictions
1 GO term
LotjaGi4g1v0416900.1
n.a. Calreticulin/calnexin; TAIR: AT5G61790.1 calnexin 1; Swiss-Prot: sp|Q39817|CALX_SOYBN Calnexin homolog; TrEMBL-Plants: tr|A0A151S2C8|A0A151S2C8_CAJCA Calnexin isogeny; Found in the gene: LotjaGi4g1v0416900 LjG1.1_chr4 79259732 79263303 -
4 domain predictions
1 GO term
LotjaGi4g1v0416900.2
n.a. Calreticulin/calnexin; TAIR: AT5G61790.1 calnexin 1; Swiss-Prot: sp|Q39817|CALX_SOYBN Calnexin homolog; TrEMBL-Plants: tr|A0A151S2C8|A0A151S2C8_CAJCA Calnexin isogeny; Found in the gene: LotjaGi4g1v0416900 LjG1.1_chr4 79260315 79263132 -
4 domain predictions
1 GO term