Domain Predictions — View

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PS00805

Source: ProSitePatterns

Description

Calreticulin family repeated motif signature.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0005509 View details of GO:0005509 AmiGO InterPro QuickGO	Molecular function	Calcium ion binding	Interacting selectively and non-covalently with calcium ions (Ca2+).	Subterm of GO:0046872

Associated Lotus transcripts 5

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v1387030.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: calnexin homolog [Glycine max] gi\|356508884\|ref\|XP_003523183.1\|	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:2.10.250.10 G3DSA:2.60.120.200 IPR001580 IPR009033 IPR013320 IPR018124 NON_CYTOPLASMIC_DOMAIN PF00262 PR00626 PS00803 PS00804 PS00805 PTHR11073 PTHR11073:SF1 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF49899 SSF63887 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK TMhelix TRANSMEMBRANE mobidb-lite	27
Lj4g3v2861680.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: calnexin homolog isoform X2 [Cicer arietinum] gi\|502139546\|ref\|XP_004503810.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:2.10.250.10 G3DSA:2.60.120.200 IPR001580 IPR009033 IPR013320 IPR018124 NON_CYTOPLASMIC_DOMAIN PF00262 PR00626 PS00803 PS00804 PS00805 PTHR11073 PTHR11073:SF1 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF49899 SSF63887 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK TMhelix TRANSMEMBRANE mobidb-lite	26
LotjaGi1g1v0331500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Calreticulin/calnexin; TAIR: AT5G61790.1 calnexin 1; Swiss-Prot: sp\|Q39817\|CALX_SOYBN Calnexin homolog; TrEMBL-Plants: tr\|A0A0R0KAL0\|A0A0R0KAL0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0331500	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:2.10.250.10 G3DSA:2.60.120.200 IPR001580 IPR009033 IPR013320 IPR018124 NON_CYTOPLASMIC_DOMAIN PF00262 PR00626 PS00803 PS00804 PS00805 PTHR11073 PTHR11073:SF30 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF49899 SSF63887 SignalP-TM SignalP-noTM TMhelix TRANSMEMBRANE mobidb-lite	27
LotjaGi4g1v0416900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Calreticulin/calnexin; TAIR: AT5G61790.1 calnexin 1; Swiss-Prot: sp\|Q39817\|CALX_SOYBN Calnexin homolog; TrEMBL-Plants: tr\|A0A151S2C8\|A0A151S2C8_CAJCA Calnexin isogeny; Found in the gene: LotjaGi4g1v0416900	Domains CYTOPLASMIC_DOMAIN G3DSA:2.10.250.10 G3DSA:2.60.120.200 IPR001580 IPR009033 IPR013320 IPR018124 NON_CYTOPLASMIC_DOMAIN PF00262 PR00626 PS00803 PS00804 PS00805 PTHR11073 PTHR11073:SF30 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF49899 SSF63887 SignalP-TM SignalP-noTM TMhelix TRANSMEMBRANE mobidb-lite	26
LotjaGi4g1v0416900.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Calreticulin/calnexin; TAIR: AT5G61790.1 calnexin 1; Swiss-Prot: sp\|Q39817\|CALX_SOYBN Calnexin homolog; TrEMBL-Plants: tr\|A0A151S2C8\|A0A151S2C8_CAJCA Calnexin isogeny; Found in the gene: LotjaGi4g1v0416900	Domains CYTOPLASMIC_DOMAIN G3DSA:2.10.250.10 G3DSA:2.60.120.200 IPR001580 IPR009033 IPR013320 IPR018124 NON_CYTOPLASMIC_DOMAIN PF00262 PR00626 PS00803 PS00804 PS00805 PTHR11073 PTHR11073:SF30 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF49899 SSF63887 SignalP-TM SignalP-noTM TMhelix TRANSMEMBRANE mobidb-lite	26

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	20.00