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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR018834
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 10 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.673s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj2g3v3022950.1
n.a. Telomerase-binding protein EST1A [Medicago truncatula] gi|357493925|ref|XP_003617251.1| chr2 39127501 39135121 +
2 domain predictions
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Lj6g3v0962610.1
n.a. PREDICTED: telomerase-binding protein EST1A-like isoform X1 [Cicer arietinum] gi|502166667|ref|XP_004513951.1| chr6 10831228 10837345 -
2 domain predictions
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Lj6g3v2018650.1
n.a. PREDICTED: protein SMG7-like [Glycine max] gi|356546642|ref|XP_003541733.1| chr6 23885910 23895724 -
2 domain predictions
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Lj6g3v2018650.2
n.a. PREDICTED: protein SMG7-like [Glycine max] gi|356546642|ref|XP_003541733.1| chr6 23887642 23895724 -
2 domain predictions
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LotjaGi1g1v0050400.1
n.a. Telomerase activating protein Est1; TAIR: AT5G19400.4 Telomerase activating protein Est1; Swiss-Prot: sp|A9QM73|SMG7_ARATH Protein SMG7; TrEMBL-Plants: tr|A0A072UH06|A0A072UH06_MEDTR Telomerase activating protein Est1; Found in the gene: LotjaGi1g1v0050400 LjG1.1_chr1 7202583 7209892 -
2 domain predictions
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LotjaGi1g1v0050400.2
n.a. Telomerase activating protein Est1; TAIR: AT5G19400.4 Telomerase activating protein Est1; Swiss-Prot: sp|A9QM73|SMG7_ARATH Protein SMG7; TrEMBL-Plants: tr|A0A072UH06|A0A072UH06_MEDTR Telomerase activating protein Est1; Found in the gene: LotjaGi1g1v0050400 LjG1.1_chr1 7202599 7209756 -
2 domain predictions
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LotjaGi6g1v0179400.1
n.a. Protein SMG7; TAIR: AT5G19400.1 Telomerase activating protein Est1; Swiss-Prot: sp|A9QM73|SMG7_ARATH Protein SMG7; TrEMBL-Plants: tr|I1KMI5|I1KMI5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0179400 LjG1.1_chr6 47126752 47139065 +
2 domain predictions
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LotjaGi6g1v0179400.2
n.a. Protein SMG7; TAIR: AT5G19400.1 Telomerase activating protein Est1; Swiss-Prot: sp|A9QM73|SMG7_ARATH Protein SMG7; TrEMBL-Plants: tr|I1KMI5|I1KMI5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0179400 LjG1.1_chr6 47128936 47132653 +
2 domain predictions
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LotjaGi6g1v0330200.1
n.a. Telomerase activating protein Est1; TAIR: AT1G28260.1 Telomerase activating protein Est1; Swiss-Prot: sp|Q9FZ99|SMG7L_ARATH Protein SMG7L; TrEMBL-Plants: tr|I1M225|I1M225_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0330200 LjG1.1_chr6 64550274 64555693 -
2 domain predictions
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LotjaGi6g1v0330500.1
n.a. Telomerase activating protein Est1; TAIR: AT1G28260.1 Telomerase activating protein Est1; Swiss-Prot: sp|Q9FZ99|SMG7L_ARATH Protein SMG7L; TrEMBL-Plants: tr|I1M225|I1M225_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0330500 LjG1.1_chr6 64584007 64590150 -
2 domain predictions
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