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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0330200 |
| Transcript ID | LotjaGi6g1v0330200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Telomerase activating protein Est1; TAIR: AT1G28260.1 Telomerase activating protein Est1; Swiss-Prot: sp|Q9FZ99|SMG7L_ARATH Protein SMG7L; TrEMBL-Plants: tr|I1M225|I1M225_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0330200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:64550274..64555693) extracted from Lotus japonicus Gifu genome v1.2.
AAGTTTTATATTAAAAGCCAAAAAATCGAAGATAGTTGTCCTGTAAGCAGTCTCACTCATGATCATAAATCCATAATCCT ACCTTTTCCTTTGTCTGTTTCACAACTGAACCACTGTTGGTGGTCCAATTCTTCTTGCTTCTCTTTCTCCCTCTATCTCT CTCACAGGTGTATGCTGTCAACAGCTTTAGATAATCTGGGCTCACTTTCTGGCTCCTTGGTTGCACTGGAACTCTTTACT CTAGAATATCTTGTTCATTAGGTGATCTTTTCTTTTCCTTAAATTCTTGTCTTTCATTTATAACTTTTTAGTTTAATTGA CATAACAAATTCTTTGTTTTTACTTCAGTATATGTTCTCTGTCTTTCTCTGTGATGTTCTAATTTTGTCAATTCAGTTCT GATATGTGTTTGTTCATGAAATTGCAACTCCCAAACTTGCTTGATTTCCTATGTTTCTCCTCAAGTTATGTCCTAATGTG TAGTAAACTGGTATGCAACTTTTATGCACAAAGATCATGATGTTCATCTAATTGCTCAAACAAGGTTATCAATCATCATT GTTATCTTCTTAAACAGTACTCTGGATAGATCTCAGCTTAGAGTTGGTTATTTGTTGTAATTAGGTTTTGGTTCTCAGCA TCACGTGCTTAATTGTCTTTTATTCTTTTTGTCACTTTGGTATACCCAAATTCAAGGAAAAGTTTAATTTTTTTAGTATG ATTCATCCTTGAAATTTCATACTCATTTCTCAAGGGACACAAAACTGACCCTTTCTCTTAAAACTCTTGTTAATTTACGG ATAGATTCATGAGTAGTTTATGAGGTATCAGCACATATATCAGAAGTTATCTATGGCCACCCATACTTGAGTTTGGGAGT CAACCTCAAAGTTGAAATTTAAGCATTGAAATTAAATTTCATGCATGTGTTTGTAGTATCCTTATGTCTAGACTTTTGAG TTTTGACCATGTTGAAATTGACTGTTAAGAGTTCATATTCATACTTGAGGTTTAGATTTTGACTACTTTTTTCTGTCATT GCATCATGAACGGCACCAGTTATAATAGGTCAGGGTTCCAAACAGATGCATTGCCTTTGAAGTAAGCCTCGACCATGACA ACCAATCTGTCTCTTTCTTCAGTAGCTCGTAAAGAAGAAGTCTTACTTGAGGTGAATTTCTGAAACTAGCATTCCTTGTT CTGCTTTAGATTTGGGAAATGTATTTTAATTTGATATCCTGAACTTCCAACTTTGTGGCTTGTTCAGATCGGGAATTCTG AAAAGCAGTTGTGGGCACTGATCCATTCTAAAGGCCTTTTGCACTCGGATGTTCAAGACTTGTACCGCAAGATCCGGTCT AGTTATGAGAGAATCATCTTGAATAATTACACCCACTCAGAACTTCAGGATGTGGAATATTCTTTGTGGAAGCTCCACTA TAAGCACATTGATGAGTTTCGCAAAATAATAAAGAAAAGCTCTGGTGATGGGGAGAGCAGAAAATCAGGAATGCCGCAAA CTGGTTTTGTCCAGGGAAACAATGACAACAATGCTAAGTTATTTAAGTTGTTTCTGTCAGAAGCTTCCGAGTTTTACCAA ACTCTGATTGTAAAACTCAGAAAACATTATGGAGTCCCAGAAGAGGCCTTATTTTATAAAAAGGGTTGGATCTCTACTTT TGTTGAACCAGATGTCAAGCTAAAATGCCGATATTTATGTCATCGCTGCTTAGTTTGTATGGGGGATCTTGCCAGGTACA AACAACAATGTGAAAACTCTGATATTCAAAATCATAATTGGTCAGTTGCAGCAACCCATTACATGGAAGCAACAAGGATT TGGCCTAATAGTGGAAACCCTCAAAATCAGGTAAATGTTTCTTGTCACCTGCAAATGAAAAACTTTTATCTTCTACATTT TTTCATATGACAAAAACCTTATTCGTACGCAGTTGGCTGTGCTAGCAACATATATTGGTGATGAGTTTCTTGCTCTATAC CACTGTGTAAGAAGTTTAGCAGTTAAAGAACCTTTTCCTGATGCATGGAACAATATTATCTTGTTGTTTGAAAAGGTAAT ATAATATTGAGGCTCTTTAATATACTACATTTATTCTATCTATATGTTTAGTGCTTCTAAGCTTCTTTTATTGCCATCTC CTCAAGTGTCTCTTATGATCTTGCAGAACAGGTCATCTTCTCAGCAGTATGTTTCCAGTGATGTCTGCTTTGATTTCTTT AAACCTTTTGGAAGAGTTGGTAAAGAGACAAAGGCGCAACTGAAAGATGATTACTCAAACTGCAATAAAGTTGAAGATGA AAGTAGTCATTTTACAGACACAAAGTTATGGTCTCTTATGGTCAGAATGATAAGTTTCCTCTTCATACCATCAAGGTATA TCTTTGATTCATTTTATTTTATTCTAGAATTTTCATGTCCTGTGCTGGTTTTTTACTGTTTTAATTTCCCTCTTGTAATC GAATGGAGTCATTCTTATTCACTGTATTGTTGAATAGAATTTCTTCAAGAGTACATCTGTTCAGTTTACAGTTAATAACT AATTTATTATGTAGGGTTTTTAGTTTCCTTAAAGTAGCTAGTGTTTATACTAACATCTGTGAATATTATGTTGTGAGCAT AGCTTTTTTACACCACCTCAGCCCCAAAAGAAAGATACTGATGCCAACATTCTAATTTCGCTGTGATTATTGCTGCATGT ATGTGACTTTTTTACTGGGAGAAAATAAAAGAAAAGTTATTTCTTCAATGTATTCCAATACGGCTATTTTCTCCGGTACC CATTTAAAAGGGAGGGTTCTGTACCTTTTTGTCTTAATATGCCATGTTATCTTTTATAAAAAAAACTAATTCATGGTTCT GAATATTTTAATGATAGCGCTGGAATGGACATATTTCATTGTTCAATATATTATGTCATTTGTTTTGGGTGAAGATTTGT GCATATCACTACTAGGATGCACTTAATCTGCACTCCTTAAAGACTTTGTTTACTTGTAGAAAGACTTGTAGCAATGTCTA CACAGTTTTAGGTCACCTATTATGCGTGTTCTGATGTATTTTATCTCATATCTCATGAAGCAGTTTTGAGGAATTCTCTA GTGCATTTGCATCTGCAATTGGAGAGTTGGATAAAATGATGGAGCTAGAAGATATAGAACTAAAGGACATGTTGGAGTCC TATAGTCAAATGGCTTTAGCTAGAAGAGGTCCTTTCCGAGCCATACAAGTAGTTTCTATTCTCATTTTTTCCCTCAAGAA TCTAAATGATAAACATGAAAAAAATGAATCAGAAGACAAAAATGATTGGCACTTGTTGCAGTTGGCATTTACTACTTCTT TCATCTTCATGGGACGTTTTATTGAAAGATGCCTAAATGCTAGTTCTTTGAATCATTGCCCCTTATTACCTTCTGTGCTT GTTTTTGTGGAGTGGTGTTCAAGCATTGTTGATGCAACTGAAGTATGTTCAACTGATCAAAAGAGTAGAAAGGCCATTTC TTACTTTTTTGATGTGTTTGTTGAACTTTTAAATAAACTTAATGACAACAGAAAGGAAACTGAGAAGCTTCTTGATGCTA CCCCTCTATGGGAGGATTATGAGTTGCGGGGCTTTGTACCTATAGCTTGTTCGCATTCCTCATTGAATTTTTGCAGTAAT TGGGATCACATAGACAATTTTAAAAGTGGAACTGAATTGCGTGCTGAGCGCATCAGAGAAGCAGCAATGAAGATTGCTAG CAGATCAAATCATTTGCAAAAGTGGATTACATGTGATAAATTGGGGAAACAAATTCTTGTGGCTAGACCATATGAGGATC AGGATAGGAAAAAAGGAGAAAATGTGAAGTCCAATGGCAATAGGACAGGAGGGGAAGAGCCTAACCAACAAACTAACAAA AACAGGGAGAAACATGGCAAATGGATGACAGAGGATAATCCCAGTAGCTCGAGTACCGATGGGAAATCTTCTGTAGTGGA AGAAGAAGAAGAAGTTATTCTCTTCCGGCCTCTCACAAGGTATAATTCAGCACCATCATACCCCTCTACCTCACCTGATG ACCAGATATCACCAAAAGACAAAGATGACCAAAGTTTACCATCTGATGATTGTTTGCGCCGTGCTACGTCTCTGCTCATG GCACAAACCCCAGATCAAACTCAAACTGATCCATGGGGATTCCATGGAAGCATTTTGAATTTCACGACTGACGGACCACT CAAACAGCAAGAACCTTCAACAAAAGAATCAAATGTACACACTTTTTCAGAAGCCCCAATCTCTGCTGGCCCTCCCTCAC TAAATGCTTGGGTTCTTGATGGAGGAAGCTTGAGCAATAACAGAAACAATGGGACAAAAGGTCTTAATGAGCACAGGTTG GAGCCCATTGAGGAAATAGCTTCATCTTTGGCTGGTCTTTCCATCAATAACAGTGAGAGTTTAGTCATCAGTTCAGTGGA TGAATCTTCAAACTTCAATCCATCTTTTGCTACATATACTATTCCATTACCTTCTGCTCCATTGTTGCCTGAGAATGCTG CTTGGTTTACTGATGTACAATCTACTTTATCTGCACCAAGATTTCCAGTGAACTCATCACCAATAACTGGTTTTTCAGAA TGGAGTCCTAATTATGGACCACATGGATATGATCCTGGATTTCCAGTTTCGTTAAGCGGATACCCACCACCTGGCAGAAT GACATCTTCAGAATGGCTGCGTTGGTACAGAGAGAATCACAAGCACAATTATATGCAGCCTACTTATTTGAATCCTCATG GTAATGGAAATCATGAAAACTTCATGTATCATGATACTTACCGGTTTGATCAATTCGATCGATGGGGCAATGCTGTGCCT TCTAACCAGCGTGTATATATGGAGCCTCCAGGACCCCCACCATTGCATCATGGTTTTGTTGGTGCAGGTGAACACAAAGC CAGTCTCTTCAACAATTTTCAAACACCAATCCCTTATGGGTGTGGTGGTGCTGTGACAGACCTGAGAAGTGAGCCACAGT CTCTGCTGGAGTGCCTGAAGCAGAAGGAATGGCGACTCCAGCATGACCCTAAACTCAGAGGGCCTACATTCATGGGAGAT TAGAACCATTTCAACATTTGGTTTTTGTGCACCTTGATCTACACTTTGGTTGCATTGTAAAATATGTATGGTTGATATTT ATAGGAGAGATCCTCCTCCTTTCAGCCACTTTTCTCTGATTTGCATGTAAAATATATAGAGTTGAGATTAGAACAAAAAA TCCTTATTCCCAGAAGTGGGTACGTGATTAGTGAAAAACAAAACAAGCTTACCAGCCATGGCTACTATGAGATTATGATT AAAATTGTAGAGGAATATATGATGCTAATTTATGGTTGGTTTGAGTGTTATATCTGAAGA
CDS sequence (LotjaGi6g1v0330200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACAACCAATCTGTCTCTTTCTTCAGTAGCTCGTAAAGAAGAAGTCTTACTTGAGATCGGGAATTCTGAAAAGCAGTT GTGGGCACTGATCCATTCTAAAGGCCTTTTGCACTCGGATGTTCAAGACTTGTACCGCAAGATCCGGTCTAGTTATGAGA GAATCATCTTGAATAATTACACCCACTCAGAACTTCAGGATGTGGAATATTCTTTGTGGAAGCTCCACTATAAGCACATT GATGAGTTTCGCAAAATAATAAAGAAAAGCTCTGGTGATGGGGAGAGCAGAAAATCAGGAATGCCGCAAACTGGTTTTGT CCAGGGAAACAATGACAACAATGCTAAGTTATTTAAGTTGTTTCTGTCAGAAGCTTCCGAGTTTTACCAAACTCTGATTG TAAAACTCAGAAAACATTATGGAGTCCCAGAAGAGGCCTTATTTTATAAAAAGGGTTGGATCTCTACTTTTGTTGAACCA GATGTCAAGCTAAAATGCCGATATTTATGTCATCGCTGCTTAGTTTGTATGGGGGATCTTGCCAGGTACAAACAACAATG TGAAAACTCTGATATTCAAAATCATAATTGGTCAGTTGCAGCAACCCATTACATGGAAGCAACAAGGATTTGGCCTAATA GTGGAAACCCTCAAAATCAGTTGGCTGTGCTAGCAACATATATTGGTGATGAGTTTCTTGCTCTATACCACTGTGTAAGA AGTTTAGCAGTTAAAGAACCTTTTCCTGATGCATGGAACAATATTATCTTGTTGTTTGAAAAGAACAGGTCATCTTCTCA GCAGTATGTTTCCAGTGATGTCTGCTTTGATTTCTTTAAACCTTTTGGAAGAGTTGGTAAAGAGACAAAGGCGCAACTGA AAGATGATTACTCAAACTGCAATAAAGTTGAAGATGAAAGTAGTCATTTTACAGACACAAAGTTATGGTCTCTTATGGTC AGAATGATAAGTTTCCTCTTCATACCATCAAGTTTTGAGGAATTCTCTAGTGCATTTGCATCTGCAATTGGAGAGTTGGA TAAAATGATGGAGCTAGAAGATATAGAACTAAAGGACATGTTGGAGTCCTATAGTCAAATGGCTTTAGCTAGAAGAGGTC CTTTCCGAGCCATACAAGTAGTTTCTATTCTCATTTTTTCCCTCAAGAATCTAAATGATAAACATGAAAAAAATGAATCA GAAGACAAAAATGATTGGCACTTGTTGCAGTTGGCATTTACTACTTCTTTCATCTTCATGGGACGTTTTATTGAAAGATG CCTAAATGCTAGTTCTTTGAATCATTGCCCCTTATTACCTTCTGTGCTTGTTTTTGTGGAGTGGTGTTCAAGCATTGTTG ATGCAACTGAAGTATGTTCAACTGATCAAAAGAGTAGAAAGGCCATTTCTTACTTTTTTGATGTGTTTGTTGAACTTTTA AATAAACTTAATGACAACAGAAAGGAAACTGAGAAGCTTCTTGATGCTACCCCTCTATGGGAGGATTATGAGTTGCGGGG CTTTGTACCTATAGCTTGTTCGCATTCCTCATTGAATTTTTGCAGTAATTGGGATCACATAGACAATTTTAAAAGTGGAA CTGAATTGCGTGCTGAGCGCATCAGAGAAGCAGCAATGAAGATTGCTAGCAGATCAAATCATTTGCAAAAGTGGATTACA TGTGATAAATTGGGGAAACAAATTCTTGTGGCTAGACCATATGAGGATCAGGATAGGAAAAAAGGAGAAAATGTGAAGTC CAATGGCAATAGGACAGGAGGGGAAGAGCCTAACCAACAAACTAACAAAAACAGGGAGAAACATGGCAAATGGATGACAG AGGATAATCCCAGTAGCTCGAGTACCGATGGGAAATCTTCTGTAGTGGAAGAAGAAGAAGAAGTTATTCTCTTCCGGCCT CTCACAAGGTATAATTCAGCACCATCATACCCCTCTACCTCACCTGATGACCAGATATCACCAAAAGACAAAGATGACCA AAGTTTACCATCTGATGATTGTTTGCGCCGTGCTACGTCTCTGCTCATGGCACAAACCCCAGATCAAACTCAAACTGATC CATGGGGATTCCATGGAAGCATTTTGAATTTCACGACTGACGGACCACTCAAACAGCAAGAACCTTCAACAAAAGAATCA AATGTACACACTTTTTCAGAAGCCCCAATCTCTGCTGGCCCTCCCTCACTAAATGCTTGGGTTCTTGATGGAGGAAGCTT GAGCAATAACAGAAACAATGGGACAAAAGGTCTTAATGAGCACAGGTTGGAGCCCATTGAGGAAATAGCTTCATCTTTGG CTGGTCTTTCCATCAATAACAGTGAGAGTTTAGTCATCAGTTCAGTGGATGAATCTTCAAACTTCAATCCATCTTTTGCT ACATATACTATTCCATTACCTTCTGCTCCATTGTTGCCTGAGAATGCTGCTTGGTTTACTGATGTACAATCTACTTTATC TGCACCAAGATTTCCAGTGAACTCATCACCAATAACTGGTTTTTCAGAATGGAGTCCTAATTATGGACCACATGGATATG ATCCTGGATTTCCAGTTTCGTTAAGCGGATACCCACCACCTGGCAGAATGACATCTTCAGAATGGCTGCGTTGGTACAGA GAGAATCACAAGCACAATTATATGCAGCCTACTTATTTGAATCCTCATGGTAATGGAAATCATGAAAACTTCATGTATCA TGATACTTACCGGTTTGATCAATTCGATCGATGGGGCAATGCTGTGCCTTCTAACCAGCGTGTATATATGGAGCCTCCAG GACCCCCACCATTGCATCATGGTTTTGTTGGTGCAGGTGAACACAAAGCCAGTCTCTTCAACAATTTTCAAACACCAATC CCTTATGGGTGTGGTGGTGCTGTGACAGACCTGAGAAGTGAGCCACAGTCTCTGCTGGAGTGCCTGAAGCAGAAGGAATG GCGACTCCAGCATGACCCTAAACTCAGAGGGCCTACATTCATGGGAGATTAG
Protein sequence (LotjaGi6g1v0330200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTTNLSLSSVARKEEVLLEIGNSEKQLWALIHSKGLLHSDVQDLYRKIRSSYERIILNNYTHSELQDVEYSLWKLHYKHI DEFRKIIKKSSGDGESRKSGMPQTGFVQGNNDNNAKLFKLFLSEASEFYQTLIVKLRKHYGVPEEALFYKKGWISTFVEP DVKLKCRYLCHRCLVCMGDLARYKQQCENSDIQNHNWSVAATHYMEATRIWPNSGNPQNQLAVLATYIGDEFLALYHCVR SLAVKEPFPDAWNNIILLFEKNRSSSQQYVSSDVCFDFFKPFGRVGKETKAQLKDDYSNCNKVEDESSHFTDTKLWSLMV RMISFLFIPSSFEEFSSAFASAIGELDKMMELEDIELKDMLESYSQMALARRGPFRAIQVVSILIFSLKNLNDKHEKNES EDKNDWHLLQLAFTTSFIFMGRFIERCLNASSLNHCPLLPSVLVFVEWCSSIVDATEVCSTDQKSRKAISYFFDVFVELL NKLNDNRKETEKLLDATPLWEDYELRGFVPIACSHSSLNFCSNWDHIDNFKSGTELRAERIREAAMKIASRSNHLQKWIT CDKLGKQILVARPYEDQDRKKGENVKSNGNRTGGEEPNQQTNKNREKHGKWMTEDNPSSSSTDGKSSVVEEEEEVILFRP LTRYNSAPSYPSTSPDDQISPKDKDDQSLPSDDCLRRATSLLMAQTPDQTQTDPWGFHGSILNFTTDGPLKQQEPSTKES NVHTFSEAPISAGPPSLNAWVLDGGSLSNNRNNGTKGLNEHRLEPIEEIASSLAGLSINNSESLVISSVDESSNFNPSFA TYTIPLPSAPLLPENAAWFTDVQSTLSAPRFPVNSSPITGFSEWSPNYGPHGYDPGFPVSLSGYPPPGRMTSSEWLRWYR ENHKHNYMQPTYLNPHGNGNHENFMYHDTYRFDQFDRWGNAVPSNQRVYMEPPGPPPLHHGFVGAGEHKASLFNNFQTPI PYGCGGAVTDLRSEPQSLLECLKQKEWRLQHDPKLRGPTFMGD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 1000 | 1000 | 0.0 | – | |
| PANTHER | 1 | 1000 | 1000 | 0.0 | – | |
| Gene3D | 18 | 265 | 248 | 2.1E-54 | ||
| SUPERFAMILY | 19 | 568 | 550 | 2.66E-78 | ||
| Pfam | 68 | 187 | 120 | 3.0E-17 | ||
| Pfam | 200 | 514 | 315 | 4.0E-55 | ||
| MobiDBLite | 575 | 672 | 98 | - | – | |
| MobiDBLite | 658 | 672 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0330200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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