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LotjaGi6g1v0330500.1

Overview

Field Value
Gene ID LotjaGi6g1v0330500
Transcript ID LotjaGi6g1v0330500.1
Lotus japonicus genome version Gifu v1.2
Description Telomerase activating protein Est1; TAIR: AT1G28260.1 Telomerase activating protein Est1; Swiss-Prot: sp|Q9FZ99|SMG7L_ARATH Protein SMG7L; TrEMBL-Plants: tr|I1M225|I1M225_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0330500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:64584007..64590150) extracted from Lotus japonicus Gifu genome v1.2.

ATCCTACCTTTTCCTTTGTCTGTTTCACAACTGAACCACTGTTGGTGGTCCAATTCTTCTTGCTTCTCTTTCTCCCTCTA TCTCTCTCACAGGTGTATGCTGTCAACAGCTTTAGATAATCTGGGCTCACTTTCTGGCTCCTTGGTTGCACTGGAACTCT TTACTCTAGAATATCTTGTTCATTAGGTGATCTTTTCTTTTCCTTAAATTCTTGTCTTTCATTTATAACTTTTTAGTTTA ATTGACATAACAAATTCTTTGTTTTTACTTCAGTATATGTTCTCTGTCTTTCTCTGTGATGTTCTAATTTTGTCAATTCA GTTCTGATATGTGTTTGTTCATGAAATTGCAACTCCCAAACTTGCTTGATTTCCTATGTTTCTCCTCAAGTTATGTCCTA ATGTGTAGTAAACTGGTATGCAACTTTTATGCACAAAGATCATGATGTTCATCTAATTGCTCAAACAAGGTTATCAATCA TCATTGTTATCTTCTTAAACAGTACTCTGGATAGATCTCAGCTTAGAGTTGGTTATTTGTTGTAATTAGGTTTTGGTTCT CAGCATCACGTGCTTAATTGTCTTTTATTCTTTTTGTCACTTTGGTATACCCAAATTCAAGGAAAAGTTTAATTTTTTTA GTATGATTCATCCTTGAAATTTCATACTCATTTCTCAAGGGACACAAAACTGACCCTTTCTCTTAAAACTCTTGTTAATT TACGGATAGATTCATGAGTAGTTTATGAGGTATCAGCACATATATCAGAAGTTATCTATGGCCACCCATACTTGAGTTTG GGAGTCAACCTCAAAGTTGAAATTTAAGCATTGAAATTAAATTTCATGCATGTGTTTGTAGTATCCTTATGTCTAGACTT TTGAGTTTTGACCATGTTGAAATTGACTGTTAAGAGTTCATATTCATACTTGAGGTTTAGATTTTGACTACTTTTTTCTG TCATTGCATCATGAACGGCACCAGTTATAATAGGTCAGGGTTCCAAACAGATGCATTGCCTTTGAAGTAAGCCTCGACCA TGACAACCAATCTGTCTCTTTCTTCAGTAGCTCGTAAAGAAGAAGTCTTACTTGAGGTGAATTTCTGAAACTAGCATTCC TTGTTCTGCTTTAGATTTGGGAAATGTATTTTAATTTGATATCCTGAACTTCCAACTTTGTGGCTTGTTCAGATCGGGAA TTCTGAAAAGCAGTTGTGGGCACTGATCCATTCTAAAGGCCTTTTGCACTCGGATGTTCAAGACTTGTACCGCAAGATCC GGTCTAGTTATGAGAGAATCATCTTGAATAATTACACCCACTCAGAACTTCAGGATGTGGAATATTCTTTGTGGAAGCTC CACTATAAGCACATTGATGAGTTTCGCAAAATAATAAAGAAAAGCTCTGGTGATGGGGAGAGCAGAAAATCAGGAATGCC GCAAACTGGTTTTGTCCAGGGAAACAATGACAACAATGCTAAGTTATTTAAGTTGTTTCTGTCAGAAGCTTCCGAGTTTT ACCAAACTCTGATTGTAAAACTCAGAAAACATTATGGAGTCCCAGAAGAGGCCTTATTTTATAAAAAGGGTTGGATCTCT ACTTTTGTTGAACCAGATGTCAAGCTAAAATGCCGATATTTATGTCATCGCTGCTTAGTTTGTATGGGGGATCTTGCCAG GTACAAACAACAATGTGAAAACTCTGATATTCAAAATCATAATTGGTCAGTTGCAGCAACCCATTACATGGAAGCAACAA GGATTTGGCCTAATAGTGGAAACCCTCAAAATCAGGTAAATGTTTCTTGTCACCTGCAAATGAAAAACTTTTATCTTCTA CATTTTTTCATATGACAAAAACCTTATTCGTACGCAGTTGGCTGTGCTAGCAACATATATTGGTGATGAGTTTCTTGCTC TATACCACTGTGTAAGAAGTTTAGCAGTTAAAGAACCTTTTCCTGATGCATGGAACAATATTATCTTGTTGTTTGAAAAG GTAATATAATATTGAGGCTCTTTAATATACTACATTTATTCTATCTATATGTTTAGTGCTTCTAAGCTTCTTTTATTGCC ATCTCCTCAAGTGTCTCTTATGATCTTGCAGAACAGGTCATCTTCTCAGCAGTATGTTTCCAGTGATGTCTGCTTTGATT TCTTTAAACCTTTTGGAAGAGTTGGTAAAGAGACAAAGGCGCAACTGAAAGATGATTACTCAAACTGCAATAAAGTTGAA GATGAAAGTAGTCATTTTACAGACACAAAGTTATGGTCTCTTATGGTCAGAATGATAAGTTTCCTCTTCATACCATCAAG GTATATCTTTGATTCATTTTATTTTATTCTAGAATTTTCATGTCCTGTGCTGGTTTTTTACTGTTTTAATTTCCCTCTTG TAATCGAATGGAGTCATTCTTATTCACTGTATTGTTGAATAGAATTTCTTCAAGAGTACATCTGTTCAGTTTACAGTTAA TAACTAATTTATTATGTAGGGTTTTTAGTTTCCTTAAAGTAGCTAGTGTTTATACTAACATCTGTGAATATTATGTTGTG AGCATAGCTTTTTTACACCACCTCAGCCCCAAAAGAAAGATACTGATGCCAACATTCTAATTTCGCTGTGATTATTGCTG CATGTATGTGACTTTTTTACTGGGAGAAAATAAAAGAAAAGTTATTTCTTCAATGTATTCCAATACGGCTATTTTCTCCG GTACCCATTTAAAAGGGAGGGTTCTGTACCTTTTTGTCTTAATATGCCATGTTATCTTTTATAAAAAAAACTAATTCATG GTTCTGAATATTTTAATGATAGCGCTGGAATGGACATATTTCATTGTTCAATATATTATGTCATTTGTTTTGGGTGAAGA TTTGTGCATATCACTACTAGGATGCACTTAATCTGCACTCCTTAAAGACTTTGTTTACTTGTAGAAAGACTTGTAGCAAT GTCTACACAGTTTTAGGTCACCTATTATGCGTGTTCTGATGTATTTTATCTCATATCTCATGAAGCAGTTTTGAGGAATT CTCTAGTGCATTTGCATCTGCAATTGGAGAGTTGGATAAAATGATGGAGCTAGAAGATATAGAACTAAAGGACATGTTGG AGTCCTATAGTCAAATGGCTTTAGCTAGAAGAGGTCCTTTCCGAGCCATACAAGTAGTTTCTATTCTCATTTTTTCCCTC AAGAATCTAAATGATAAACATGAAAAAAATGAATCAGAAGACAAAAATGATTGGCACTTGTTGCAGTTGGCATTTACTAC TTCTTTCATCTTCATGGGACGTTTTATTGAAAGATGCCTAAATGCTAGTTCTTTGAATCATTGCCCCTTATTACCTTCTG TGCTTGTTTTTGTGGAGTGGTGTTCAAGCATTGTTGATGCAACTGAAGTATGTTCAACTGATCAAAAGAGTAGAAAGGCC ATTTCTTACTTTTTTGATGTGTTTGTTGAACTTTTAAATAAACTTAATGACAACAGAAAGGAAACTGAGAAGCTTCTTGA TGCTACCCCTCTATGGGAGGATTATGAGTTGCGGGGCTTTGTACCTATAGCTTGTTCGCATTCCTCATTGAATTTTTGCA GTAATTGGGATCACATAGACAATTTTAAAAGTGGAACTGAATTGCGTGCTGAGCGCATCAGAGAAGCAGCAATGAAGATT GCTAGCAGATCAAATCATTTGCAAAAGTGGATTACATGTGATAAATTGGGGAAACAAATTCTTGTGGCTAGACCATATGA GGATCAGGATAGGAAAAAAGGAGAAAATGTGAAGTCCAATGGCAATAGGACAGGAGGGGAAGAGCCTAACCAACAAACTA ACAAAAACAGGGAGAAACATGGCAAATGGATGACAGAGGATAATCCCAGTAGCTCGAGTACCGATGGGAAATCTTCTGTA GTGGAAGAAGAAGAAGAAGTTATTCTCTTCAGGCCTCTCACAAGGTATAATTCAGCACCATCATACCCCTCTACCTCACC TGATGACCAGATATCACCAAAAGACAAAGATGACCAAAGTTTACCATCTGATGATTGTTTGCGCCGTGCTACGTCTCTGC TCATGGCACAAACCCCAGATCAAACTCAAACTGATCCATGGGGATTCCATGGAAGCATTTTGAATTTCACGACTGACGGA CCACTCAAACAGCAAGAACCTTCAACAAAAGAATCAAATGTACACACTTTTTCAGAAGCCCCAATCTCTGCTGGCCCTCC CTCACTAAATGCTTGGGTTCTTGATGGAGGAAGCTTGAGCAATAACAGAAACAATGGGACAAAAGGTCTTAATGAGCACA GGTTGGAGCCCATTGAGGAAATAGCTTCATCTTTGGCTGGTCTTTCCATCAATAACAGTGAGAGTTTAGTCATCAGTTCA GTGGATGAATCTTCAAACTTCAATCCATCTTTTGCTACATATACTATTCCATTACCTTCTGCTCCATTGTTGCCTGAGAA TGCTGCTTGGTTTACTGATGTACAATCTACTTTATCTGCACCAAGATTTCCAGTGAACTCATCACCAATAACTGGTTTTT CAGAATGGAGTCCTAATTATGGACCACATGGATATGATCCTGGATTTCCAGTTTCGTTAAGCGGATACCCACCACCTGGC AGAATGACATCTTCAGAATGGCTGCGTTGGTACAGAGAGAATCACAAGCACAATTATATGCAGCCTACTTATTTGAATCC TCATGGTAATGGAAATCATGAAAACTTCATGTATCATGATACTTACCGGTTTGATCAATTCGATCGATGGGGCAATGCTG TGCCTTCTAACCAGCGTGTATATATGGAGCCTCCAGGACCCCCACCATTGCATCATGGTTTTGTTGGTGCAGGTGAACAC AAAGCCAGTCTCTTCAACAATTTTCAAACACCAATCCCTTATGGGTGTGGTGGTGCTGTGACAGACCTGAGAAGTGAGCC ACAGTCTCTGCTGGAGTGCCTGAAGCAGAAGGAATGGCGACTCCAGCATGACCCTAAACTCAGAGGGCCTACATTCATGG GAGATTAGAACCATTTCAACATTTGGTTTTTGTGCACCTTGATCTACACTTTGGTTGCATTGTAAAATATGTATGGTTGA TATTTATAGGAGAGATCCTCCTCCTTTCAGCCACTTTTCTCTGATTTGCATGTAAAATATATAGAGTTGAGATTAGAACC AAAAATCCTTATTCCCAGAAGTGGGTACGTGATTAGTGAAAAACAAAACAAGCTTACCAGCCATGGCTACTATGAGATTA TGATTAAAATTGTAGAGGAATATATGATGCTAATTTATGGTTGGTTTGAGTGTTATATCTGAAGATTACTGCATATGAAA GCTGGGTAAAAGTTGGTTAGGTACTTGGCAGTGAAAAAAATTAAGCCGAAGAATAAAATGGACATCAGACCAAAGAAAAC ATTTTTAAGTAGATTTAATTTGGACATCAGACCAAAGAAATCAATTAAGATTAGATTTAATTTGATTGAAGAATGTATTA TGATATTTGTGTAGTAAAAGAATATAAATTAAGATTGCAAGCAGTTTATGATAATCTTTTTTGCATTTAAAATATAGCAA TAAAATCAGTTTAAAACCAACCAGAAATGTAAACAATATCGAGTGTATGAACTATGAACTACTGGTAAATCTATGTAAGA CATTTTGGGATAAACATATGACATACAAGGTAAAAAGGGGGACTTAAGCCAATTGATTATTGGTTATGGATGAATTCTTG TTCTTCTATAAACTTCTTCACTTATTCTTGGGATCATGACTTTTTTAATCAAATCAATCAGGGGCAGGGCATCAGGGACA TTGTTAGGTATCTCACACAAGAAACTAGGGAGTATCTCATATAATAATACATGAGTATTGTGAGGTACAAACAAAAATCA ACAATAAATTAAAGTACGTTCCTATAGATACCACCACACACATTTTCCTATTATTTCTATATGTACCGCACTTTGAAGGT GCAGTATCAGGTATGCATTTTTTTTCCATGGAATTTAATGAGGATGCAGTGATATTAATACCAATGCCCATCTTGAAGGA AAAATAATTATTTGATGTATAGAAACTAGTCCTAGAATGAGATGGATATGAAGTGACGTTGAGC 

CDS sequence (LotjaGi6g1v0330500.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGACAACCAATCTGTCTCTTTCTTCAGTAGCTCGTAAAGAAGAAGTCTTACTTGAGATCGGGAATTCTGAAAAGCAGTT GTGGGCACTGATCCATTCTAAAGGCCTTTTGCACTCGGATGTTCAAGACTTGTACCGCAAGATCCGGTCTAGTTATGAGA GAATCATCTTGAATAATTACACCCACTCAGAACTTCAGGATGTGGAATATTCTTTGTGGAAGCTCCACTATAAGCACATT GATGAGTTTCGCAAAATAATAAAGAAAAGCTCTGGTGATGGGGAGAGCAGAAAATCAGGAATGCCGCAAACTGGTTTTGT CCAGGGAAACAATGACAACAATGCTAAGTTATTTAAGTTGTTTCTGTCAGAAGCTTCCGAGTTTTACCAAACTCTGATTG TAAAACTCAGAAAACATTATGGAGTCCCAGAAGAGGCCTTATTTTATAAAAAGGGTTGGATCTCTACTTTTGTTGAACCA GATGTCAAGCTAAAATGCCGATATTTATGTCATCGCTGCTTAGTTTGTATGGGGGATCTTGCCAGGTACAAACAACAATG TGAAAACTCTGATATTCAAAATCATAATTGGTCAGTTGCAGCAACCCATTACATGGAAGCAACAAGGATTTGGCCTAATA GTGGAAACCCTCAAAATCAGTTGGCTGTGCTAGCAACATATATTGGTGATGAGTTTCTTGCTCTATACCACTGTGTAAGA AGTTTAGCAGTTAAAGAACCTTTTCCTGATGCATGGAACAATATTATCTTGTTGTTTGAAAAGAACAGGTCATCTTCTCA GCAGTATGTTTCCAGTGATGTCTGCTTTGATTTCTTTAAACCTTTTGGAAGAGTTGGTAAAGAGACAAAGGCGCAACTGA AAGATGATTACTCAAACTGCAATAAAGTTGAAGATGAAAGTAGTCATTTTACAGACACAAAGTTATGGTCTCTTATGGTC AGAATGATAAGTTTCCTCTTCATACCATCAAGTTTTGAGGAATTCTCTAGTGCATTTGCATCTGCAATTGGAGAGTTGGA TAAAATGATGGAGCTAGAAGATATAGAACTAAAGGACATGTTGGAGTCCTATAGTCAAATGGCTTTAGCTAGAAGAGGTC CTTTCCGAGCCATACAAGTAGTTTCTATTCTCATTTTTTCCCTCAAGAATCTAAATGATAAACATGAAAAAAATGAATCA GAAGACAAAAATGATTGGCACTTGTTGCAGTTGGCATTTACTACTTCTTTCATCTTCATGGGACGTTTTATTGAAAGATG CCTAAATGCTAGTTCTTTGAATCATTGCCCCTTATTACCTTCTGTGCTTGTTTTTGTGGAGTGGTGTTCAAGCATTGTTG ATGCAACTGAAGTATGTTCAACTGATCAAAAGAGTAGAAAGGCCATTTCTTACTTTTTTGATGTGTTTGTTGAACTTTTA AATAAACTTAATGACAACAGAAAGGAAACTGAGAAGCTTCTTGATGCTACCCCTCTATGGGAGGATTATGAGTTGCGGGG CTTTGTACCTATAGCTTGTTCGCATTCCTCATTGAATTTTTGCAGTAATTGGGATCACATAGACAATTTTAAAAGTGGAA CTGAATTGCGTGCTGAGCGCATCAGAGAAGCAGCAATGAAGATTGCTAGCAGATCAAATCATTTGCAAAAGTGGATTACA TGTGATAAATTGGGGAAACAAATTCTTGTGGCTAGACCATATGAGGATCAGGATAGGAAAAAAGGAGAAAATGTGAAGTC CAATGGCAATAGGACAGGAGGGGAAGAGCCTAACCAACAAACTAACAAAAACAGGGAGAAACATGGCAAATGGATGACAG AGGATAATCCCAGTAGCTCGAGTACCGATGGGAAATCTTCTGTAGTGGAAGAAGAAGAAGAAGTTATTCTCTTCAGGCCT CTCACAAGGTATAATTCAGCACCATCATACCCCTCTACCTCACCTGATGACCAGATATCACCAAAAGACAAAGATGACCA AAGTTTACCATCTGATGATTGTTTGCGCCGTGCTACGTCTCTGCTCATGGCACAAACCCCAGATCAAACTCAAACTGATC CATGGGGATTCCATGGAAGCATTTTGAATTTCACGACTGACGGACCACTCAAACAGCAAGAACCTTCAACAAAAGAATCA AATGTACACACTTTTTCAGAAGCCCCAATCTCTGCTGGCCCTCCCTCACTAAATGCTTGGGTTCTTGATGGAGGAAGCTT GAGCAATAACAGAAACAATGGGACAAAAGGTCTTAATGAGCACAGGTTGGAGCCCATTGAGGAAATAGCTTCATCTTTGG CTGGTCTTTCCATCAATAACAGTGAGAGTTTAGTCATCAGTTCAGTGGATGAATCTTCAAACTTCAATCCATCTTTTGCT ACATATACTATTCCATTACCTTCTGCTCCATTGTTGCCTGAGAATGCTGCTTGGTTTACTGATGTACAATCTACTTTATC TGCACCAAGATTTCCAGTGAACTCATCACCAATAACTGGTTTTTCAGAATGGAGTCCTAATTATGGACCACATGGATATG ATCCTGGATTTCCAGTTTCGTTAAGCGGATACCCACCACCTGGCAGAATGACATCTTCAGAATGGCTGCGTTGGTACAGA GAGAATCACAAGCACAATTATATGCAGCCTACTTATTTGAATCCTCATGGTAATGGAAATCATGAAAACTTCATGTATCA TGATACTTACCGGTTTGATCAATTCGATCGATGGGGCAATGCTGTGCCTTCTAACCAGCGTGTATATATGGAGCCTCCAG GACCCCCACCATTGCATCATGGTTTTGTTGGTGCAGGTGAACACAAAGCCAGTCTCTTCAACAATTTTCAAACACCAATC CCTTATGGGTGTGGTGGTGCTGTGACAGACCTGAGAAGTGAGCCACAGTCTCTGCTGGAGTGCCTGAAGCAGAAGGAATG GCGACTCCAGCATGACCCTAAACTCAGAGGGCCTACATTCATGGGAGATTAG 

Protein sequence (LotjaGi6g1v0330500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MTTNLSLSSVARKEEVLLEIGNSEKQLWALIHSKGLLHSDVQDLYRKIRSSYERIILNNYTHSELQDVEYSLWKLHYKHI DEFRKIIKKSSGDGESRKSGMPQTGFVQGNNDNNAKLFKLFLSEASEFYQTLIVKLRKHYGVPEEALFYKKGWISTFVEP DVKLKCRYLCHRCLVCMGDLARYKQQCENSDIQNHNWSVAATHYMEATRIWPNSGNPQNQLAVLATYIGDEFLALYHCVR SLAVKEPFPDAWNNIILLFEKNRSSSQQYVSSDVCFDFFKPFGRVGKETKAQLKDDYSNCNKVEDESSHFTDTKLWSLMV RMISFLFIPSSFEEFSSAFASAIGELDKMMELEDIELKDMLESYSQMALARRGPFRAIQVVSILIFSLKNLNDKHEKNES EDKNDWHLLQLAFTTSFIFMGRFIERCLNASSLNHCPLLPSVLVFVEWCSSIVDATEVCSTDQKSRKAISYFFDVFVELL NKLNDNRKETEKLLDATPLWEDYELRGFVPIACSHSSLNFCSNWDHIDNFKSGTELRAERIREAAMKIASRSNHLQKWIT CDKLGKQILVARPYEDQDRKKGENVKSNGNRTGGEEPNQQTNKNREKHGKWMTEDNPSSSSTDGKSSVVEEEEEVILFRP LTRYNSAPSYPSTSPDDQISPKDKDDQSLPSDDCLRRATSLLMAQTPDQTQTDPWGFHGSILNFTTDGPLKQQEPSTKES NVHTFSEAPISAGPPSLNAWVLDGGSLSNNRNNGTKGLNEHRLEPIEEIASSLAGLSINNSESLVISSVDESSNFNPSFA TYTIPLPSAPLLPENAAWFTDVQSTLSAPRFPVNSSPITGFSEWSPNYGPHGYDPGFPVSLSGYPPPGRMTSSEWLRWYR ENHKHNYMQPTYLNPHGNGNHENFMYHDTYRFDQFDRWGNAVPSNQRVYMEPPGPPPLHHGFVGAGEHKASLFNNFQTPI PYGCGGAVTDLRSEPQSLLECLKQKEWRLQHDPKLRGPTFMGD 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 1000 1000 0.0
PANTHER 1 1000 1000 0.0
Gene3D 18 265 248 2.1E-54
SUPERFAMILY 19 568 550 2.66E-78
Pfam 68 187 120 3.0E-17
Pfam 200 514 315 4.0E-55
MobiDBLite 575 672 98 -
MobiDBLite 658 672 15 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0330500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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