Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi6g1v0330500 |
Transcript ID | LotjaGi6g1v0330500.1 |
Lotus japonicus genome version | Gifu v1.2 |
Description | Telomerase activating protein Est1; TAIR: AT1G28260.1 Telomerase activating protein Est1; Swiss-Prot: sp|Q9FZ99|SMG7L_ARATH Protein SMG7L; TrEMBL-Plants: tr|I1M225|I1M225_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0330500 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:64584007..64590150) extracted from Lotus japonicus Gifu genome v1.2.
ATCCTACCTTTTCCTTTGTCTGTTTCACAACTGAACCACTGTTGGTGGTCCAATTCTTCTTGCTTCTCTTTCTCCCTCTA TCTCTCTCACAGGTGTATGCTGTCAACAGCTTTAGATAATCTGGGCTCACTTTCTGGCTCCTTGGTTGCACTGGAACTCT TTACTCTAGAATATCTTGTTCATTAGGTGATCTTTTCTTTTCCTTAAATTCTTGTCTTTCATTTATAACTTTTTAGTTTA ATTGACATAACAAATTCTTTGTTTTTACTTCAGTATATGTTCTCTGTCTTTCTCTGTGATGTTCTAATTTTGTCAATTCA GTTCTGATATGTGTTTGTTCATGAAATTGCAACTCCCAAACTTGCTTGATTTCCTATGTTTCTCCTCAAGTTATGTCCTA ATGTGTAGTAAACTGGTATGCAACTTTTATGCACAAAGATCATGATGTTCATCTAATTGCTCAAACAAGGTTATCAATCA TCATTGTTATCTTCTTAAACAGTACTCTGGATAGATCTCAGCTTAGAGTTGGTTATTTGTTGTAATTAGGTTTTGGTTCT CAGCATCACGTGCTTAATTGTCTTTTATTCTTTTTGTCACTTTGGTATACCCAAATTCAAGGAAAAGTTTAATTTTTTTA GTATGATTCATCCTTGAAATTTCATACTCATTTCTCAAGGGACACAAAACTGACCCTTTCTCTTAAAACTCTTGTTAATT TACGGATAGATTCATGAGTAGTTTATGAGGTATCAGCACATATATCAGAAGTTATCTATGGCCACCCATACTTGAGTTTG GGAGTCAACCTCAAAGTTGAAATTTAAGCATTGAAATTAAATTTCATGCATGTGTTTGTAGTATCCTTATGTCTAGACTT TTGAGTTTTGACCATGTTGAAATTGACTGTTAAGAGTTCATATTCATACTTGAGGTTTAGATTTTGACTACTTTTTTCTG TCATTGCATCATGAACGGCACCAGTTATAATAGGTCAGGGTTCCAAACAGATGCATTGCCTTTGAAGTAAGCCTCGACCA TGACAACCAATCTGTCTCTTTCTTCAGTAGCTCGTAAAGAAGAAGTCTTACTTGAGGTGAATTTCTGAAACTAGCATTCC TTGTTCTGCTTTAGATTTGGGAAATGTATTTTAATTTGATATCCTGAACTTCCAACTTTGTGGCTTGTTCAGATCGGGAA TTCTGAAAAGCAGTTGTGGGCACTGATCCATTCTAAAGGCCTTTTGCACTCGGATGTTCAAGACTTGTACCGCAAGATCC GGTCTAGTTATGAGAGAATCATCTTGAATAATTACACCCACTCAGAACTTCAGGATGTGGAATATTCTTTGTGGAAGCTC CACTATAAGCACATTGATGAGTTTCGCAAAATAATAAAGAAAAGCTCTGGTGATGGGGAGAGCAGAAAATCAGGAATGCC GCAAACTGGTTTTGTCCAGGGAAACAATGACAACAATGCTAAGTTATTTAAGTTGTTTCTGTCAGAAGCTTCCGAGTTTT ACCAAACTCTGATTGTAAAACTCAGAAAACATTATGGAGTCCCAGAAGAGGCCTTATTTTATAAAAAGGGTTGGATCTCT ACTTTTGTTGAACCAGATGTCAAGCTAAAATGCCGATATTTATGTCATCGCTGCTTAGTTTGTATGGGGGATCTTGCCAG GTACAAACAACAATGTGAAAACTCTGATATTCAAAATCATAATTGGTCAGTTGCAGCAACCCATTACATGGAAGCAACAA GGATTTGGCCTAATAGTGGAAACCCTCAAAATCAGGTAAATGTTTCTTGTCACCTGCAAATGAAAAACTTTTATCTTCTA CATTTTTTCATATGACAAAAACCTTATTCGTACGCAGTTGGCTGTGCTAGCAACATATATTGGTGATGAGTTTCTTGCTC TATACCACTGTGTAAGAAGTTTAGCAGTTAAAGAACCTTTTCCTGATGCATGGAACAATATTATCTTGTTGTTTGAAAAG GTAATATAATATTGAGGCTCTTTAATATACTACATTTATTCTATCTATATGTTTAGTGCTTCTAAGCTTCTTTTATTGCC ATCTCCTCAAGTGTCTCTTATGATCTTGCAGAACAGGTCATCTTCTCAGCAGTATGTTTCCAGTGATGTCTGCTTTGATT TCTTTAAACCTTTTGGAAGAGTTGGTAAAGAGACAAAGGCGCAACTGAAAGATGATTACTCAAACTGCAATAAAGTTGAA GATGAAAGTAGTCATTTTACAGACACAAAGTTATGGTCTCTTATGGTCAGAATGATAAGTTTCCTCTTCATACCATCAAG GTATATCTTTGATTCATTTTATTTTATTCTAGAATTTTCATGTCCTGTGCTGGTTTTTTACTGTTTTAATTTCCCTCTTG TAATCGAATGGAGTCATTCTTATTCACTGTATTGTTGAATAGAATTTCTTCAAGAGTACATCTGTTCAGTTTACAGTTAA TAACTAATTTATTATGTAGGGTTTTTAGTTTCCTTAAAGTAGCTAGTGTTTATACTAACATCTGTGAATATTATGTTGTG AGCATAGCTTTTTTACACCACCTCAGCCCCAAAAGAAAGATACTGATGCCAACATTCTAATTTCGCTGTGATTATTGCTG CATGTATGTGACTTTTTTACTGGGAGAAAATAAAAGAAAAGTTATTTCTTCAATGTATTCCAATACGGCTATTTTCTCCG GTACCCATTTAAAAGGGAGGGTTCTGTACCTTTTTGTCTTAATATGCCATGTTATCTTTTATAAAAAAAACTAATTCATG GTTCTGAATATTTTAATGATAGCGCTGGAATGGACATATTTCATTGTTCAATATATTATGTCATTTGTTTTGGGTGAAGA TTTGTGCATATCACTACTAGGATGCACTTAATCTGCACTCCTTAAAGACTTTGTTTACTTGTAGAAAGACTTGTAGCAAT GTCTACACAGTTTTAGGTCACCTATTATGCGTGTTCTGATGTATTTTATCTCATATCTCATGAAGCAGTTTTGAGGAATT CTCTAGTGCATTTGCATCTGCAATTGGAGAGTTGGATAAAATGATGGAGCTAGAAGATATAGAACTAAAGGACATGTTGG AGTCCTATAGTCAAATGGCTTTAGCTAGAAGAGGTCCTTTCCGAGCCATACAAGTAGTTTCTATTCTCATTTTTTCCCTC AAGAATCTAAATGATAAACATGAAAAAAATGAATCAGAAGACAAAAATGATTGGCACTTGTTGCAGTTGGCATTTACTAC TTCTTTCATCTTCATGGGACGTTTTATTGAAAGATGCCTAAATGCTAGTTCTTTGAATCATTGCCCCTTATTACCTTCTG TGCTTGTTTTTGTGGAGTGGTGTTCAAGCATTGTTGATGCAACTGAAGTATGTTCAACTGATCAAAAGAGTAGAAAGGCC ATTTCTTACTTTTTTGATGTGTTTGTTGAACTTTTAAATAAACTTAATGACAACAGAAAGGAAACTGAGAAGCTTCTTGA TGCTACCCCTCTATGGGAGGATTATGAGTTGCGGGGCTTTGTACCTATAGCTTGTTCGCATTCCTCATTGAATTTTTGCA GTAATTGGGATCACATAGACAATTTTAAAAGTGGAACTGAATTGCGTGCTGAGCGCATCAGAGAAGCAGCAATGAAGATT GCTAGCAGATCAAATCATTTGCAAAAGTGGATTACATGTGATAAATTGGGGAAACAAATTCTTGTGGCTAGACCATATGA GGATCAGGATAGGAAAAAAGGAGAAAATGTGAAGTCCAATGGCAATAGGACAGGAGGGGAAGAGCCTAACCAACAAACTA ACAAAAACAGGGAGAAACATGGCAAATGGATGACAGAGGATAATCCCAGTAGCTCGAGTACCGATGGGAAATCTTCTGTA GTGGAAGAAGAAGAAGAAGTTATTCTCTTCAGGCCTCTCACAAGGTATAATTCAGCACCATCATACCCCTCTACCTCACC TGATGACCAGATATCACCAAAAGACAAAGATGACCAAAGTTTACCATCTGATGATTGTTTGCGCCGTGCTACGTCTCTGC TCATGGCACAAACCCCAGATCAAACTCAAACTGATCCATGGGGATTCCATGGAAGCATTTTGAATTTCACGACTGACGGA CCACTCAAACAGCAAGAACCTTCAACAAAAGAATCAAATGTACACACTTTTTCAGAAGCCCCAATCTCTGCTGGCCCTCC CTCACTAAATGCTTGGGTTCTTGATGGAGGAAGCTTGAGCAATAACAGAAACAATGGGACAAAAGGTCTTAATGAGCACA GGTTGGAGCCCATTGAGGAAATAGCTTCATCTTTGGCTGGTCTTTCCATCAATAACAGTGAGAGTTTAGTCATCAGTTCA GTGGATGAATCTTCAAACTTCAATCCATCTTTTGCTACATATACTATTCCATTACCTTCTGCTCCATTGTTGCCTGAGAA TGCTGCTTGGTTTACTGATGTACAATCTACTTTATCTGCACCAAGATTTCCAGTGAACTCATCACCAATAACTGGTTTTT CAGAATGGAGTCCTAATTATGGACCACATGGATATGATCCTGGATTTCCAGTTTCGTTAAGCGGATACCCACCACCTGGC AGAATGACATCTTCAGAATGGCTGCGTTGGTACAGAGAGAATCACAAGCACAATTATATGCAGCCTACTTATTTGAATCC TCATGGTAATGGAAATCATGAAAACTTCATGTATCATGATACTTACCGGTTTGATCAATTCGATCGATGGGGCAATGCTG TGCCTTCTAACCAGCGTGTATATATGGAGCCTCCAGGACCCCCACCATTGCATCATGGTTTTGTTGGTGCAGGTGAACAC AAAGCCAGTCTCTTCAACAATTTTCAAACACCAATCCCTTATGGGTGTGGTGGTGCTGTGACAGACCTGAGAAGTGAGCC ACAGTCTCTGCTGGAGTGCCTGAAGCAGAAGGAATGGCGACTCCAGCATGACCCTAAACTCAGAGGGCCTACATTCATGG GAGATTAGAACCATTTCAACATTTGGTTTTTGTGCACCTTGATCTACACTTTGGTTGCATTGTAAAATATGTATGGTTGA TATTTATAGGAGAGATCCTCCTCCTTTCAGCCACTTTTCTCTGATTTGCATGTAAAATATATAGAGTTGAGATTAGAACC AAAAATCCTTATTCCCAGAAGTGGGTACGTGATTAGTGAAAAACAAAACAAGCTTACCAGCCATGGCTACTATGAGATTA TGATTAAAATTGTAGAGGAATATATGATGCTAATTTATGGTTGGTTTGAGTGTTATATCTGAAGATTACTGCATATGAAA GCTGGGTAAAAGTTGGTTAGGTACTTGGCAGTGAAAAAAATTAAGCCGAAGAATAAAATGGACATCAGACCAAAGAAAAC ATTTTTAAGTAGATTTAATTTGGACATCAGACCAAAGAAATCAATTAAGATTAGATTTAATTTGATTGAAGAATGTATTA TGATATTTGTGTAGTAAAAGAATATAAATTAAGATTGCAAGCAGTTTATGATAATCTTTTTTGCATTTAAAATATAGCAA TAAAATCAGTTTAAAACCAACCAGAAATGTAAACAATATCGAGTGTATGAACTATGAACTACTGGTAAATCTATGTAAGA CATTTTGGGATAAACATATGACATACAAGGTAAAAAGGGGGACTTAAGCCAATTGATTATTGGTTATGGATGAATTCTTG TTCTTCTATAAACTTCTTCACTTATTCTTGGGATCATGACTTTTTTAATCAAATCAATCAGGGGCAGGGCATCAGGGACA TTGTTAGGTATCTCACACAAGAAACTAGGGAGTATCTCATATAATAATACATGAGTATTGTGAGGTACAAACAAAAATCA ACAATAAATTAAAGTACGTTCCTATAGATACCACCACACACATTTTCCTATTATTTCTATATGTACCGCACTTTGAAGGT GCAGTATCAGGTATGCATTTTTTTTCCATGGAATTTAATGAGGATGCAGTGATATTAATACCAATGCCCATCTTGAAGGA AAAATAATTATTTGATGTATAGAAACTAGTCCTAGAATGAGATGGATATGAAGTGACGTTGAGC
CDS sequence (LotjaGi6g1v0330500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACAACCAATCTGTCTCTTTCTTCAGTAGCTCGTAAAGAAGAAGTCTTACTTGAGATCGGGAATTCTGAAAAGCAGTT GTGGGCACTGATCCATTCTAAAGGCCTTTTGCACTCGGATGTTCAAGACTTGTACCGCAAGATCCGGTCTAGTTATGAGA GAATCATCTTGAATAATTACACCCACTCAGAACTTCAGGATGTGGAATATTCTTTGTGGAAGCTCCACTATAAGCACATT GATGAGTTTCGCAAAATAATAAAGAAAAGCTCTGGTGATGGGGAGAGCAGAAAATCAGGAATGCCGCAAACTGGTTTTGT CCAGGGAAACAATGACAACAATGCTAAGTTATTTAAGTTGTTTCTGTCAGAAGCTTCCGAGTTTTACCAAACTCTGATTG TAAAACTCAGAAAACATTATGGAGTCCCAGAAGAGGCCTTATTTTATAAAAAGGGTTGGATCTCTACTTTTGTTGAACCA GATGTCAAGCTAAAATGCCGATATTTATGTCATCGCTGCTTAGTTTGTATGGGGGATCTTGCCAGGTACAAACAACAATG TGAAAACTCTGATATTCAAAATCATAATTGGTCAGTTGCAGCAACCCATTACATGGAAGCAACAAGGATTTGGCCTAATA GTGGAAACCCTCAAAATCAGTTGGCTGTGCTAGCAACATATATTGGTGATGAGTTTCTTGCTCTATACCACTGTGTAAGA AGTTTAGCAGTTAAAGAACCTTTTCCTGATGCATGGAACAATATTATCTTGTTGTTTGAAAAGAACAGGTCATCTTCTCA GCAGTATGTTTCCAGTGATGTCTGCTTTGATTTCTTTAAACCTTTTGGAAGAGTTGGTAAAGAGACAAAGGCGCAACTGA AAGATGATTACTCAAACTGCAATAAAGTTGAAGATGAAAGTAGTCATTTTACAGACACAAAGTTATGGTCTCTTATGGTC AGAATGATAAGTTTCCTCTTCATACCATCAAGTTTTGAGGAATTCTCTAGTGCATTTGCATCTGCAATTGGAGAGTTGGA TAAAATGATGGAGCTAGAAGATATAGAACTAAAGGACATGTTGGAGTCCTATAGTCAAATGGCTTTAGCTAGAAGAGGTC CTTTCCGAGCCATACAAGTAGTTTCTATTCTCATTTTTTCCCTCAAGAATCTAAATGATAAACATGAAAAAAATGAATCA GAAGACAAAAATGATTGGCACTTGTTGCAGTTGGCATTTACTACTTCTTTCATCTTCATGGGACGTTTTATTGAAAGATG CCTAAATGCTAGTTCTTTGAATCATTGCCCCTTATTACCTTCTGTGCTTGTTTTTGTGGAGTGGTGTTCAAGCATTGTTG ATGCAACTGAAGTATGTTCAACTGATCAAAAGAGTAGAAAGGCCATTTCTTACTTTTTTGATGTGTTTGTTGAACTTTTA AATAAACTTAATGACAACAGAAAGGAAACTGAGAAGCTTCTTGATGCTACCCCTCTATGGGAGGATTATGAGTTGCGGGG CTTTGTACCTATAGCTTGTTCGCATTCCTCATTGAATTTTTGCAGTAATTGGGATCACATAGACAATTTTAAAAGTGGAA CTGAATTGCGTGCTGAGCGCATCAGAGAAGCAGCAATGAAGATTGCTAGCAGATCAAATCATTTGCAAAAGTGGATTACA TGTGATAAATTGGGGAAACAAATTCTTGTGGCTAGACCATATGAGGATCAGGATAGGAAAAAAGGAGAAAATGTGAAGTC CAATGGCAATAGGACAGGAGGGGAAGAGCCTAACCAACAAACTAACAAAAACAGGGAGAAACATGGCAAATGGATGACAG AGGATAATCCCAGTAGCTCGAGTACCGATGGGAAATCTTCTGTAGTGGAAGAAGAAGAAGAAGTTATTCTCTTCAGGCCT CTCACAAGGTATAATTCAGCACCATCATACCCCTCTACCTCACCTGATGACCAGATATCACCAAAAGACAAAGATGACCA AAGTTTACCATCTGATGATTGTTTGCGCCGTGCTACGTCTCTGCTCATGGCACAAACCCCAGATCAAACTCAAACTGATC CATGGGGATTCCATGGAAGCATTTTGAATTTCACGACTGACGGACCACTCAAACAGCAAGAACCTTCAACAAAAGAATCA AATGTACACACTTTTTCAGAAGCCCCAATCTCTGCTGGCCCTCCCTCACTAAATGCTTGGGTTCTTGATGGAGGAAGCTT GAGCAATAACAGAAACAATGGGACAAAAGGTCTTAATGAGCACAGGTTGGAGCCCATTGAGGAAATAGCTTCATCTTTGG CTGGTCTTTCCATCAATAACAGTGAGAGTTTAGTCATCAGTTCAGTGGATGAATCTTCAAACTTCAATCCATCTTTTGCT ACATATACTATTCCATTACCTTCTGCTCCATTGTTGCCTGAGAATGCTGCTTGGTTTACTGATGTACAATCTACTTTATC TGCACCAAGATTTCCAGTGAACTCATCACCAATAACTGGTTTTTCAGAATGGAGTCCTAATTATGGACCACATGGATATG ATCCTGGATTTCCAGTTTCGTTAAGCGGATACCCACCACCTGGCAGAATGACATCTTCAGAATGGCTGCGTTGGTACAGA GAGAATCACAAGCACAATTATATGCAGCCTACTTATTTGAATCCTCATGGTAATGGAAATCATGAAAACTTCATGTATCA TGATACTTACCGGTTTGATCAATTCGATCGATGGGGCAATGCTGTGCCTTCTAACCAGCGTGTATATATGGAGCCTCCAG GACCCCCACCATTGCATCATGGTTTTGTTGGTGCAGGTGAACACAAAGCCAGTCTCTTCAACAATTTTCAAACACCAATC CCTTATGGGTGTGGTGGTGCTGTGACAGACCTGAGAAGTGAGCCACAGTCTCTGCTGGAGTGCCTGAAGCAGAAGGAATG GCGACTCCAGCATGACCCTAAACTCAGAGGGCCTACATTCATGGGAGATTAG
Protein sequence (LotjaGi6g1v0330500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTTNLSLSSVARKEEVLLEIGNSEKQLWALIHSKGLLHSDVQDLYRKIRSSYERIILNNYTHSELQDVEYSLWKLHYKHI DEFRKIIKKSSGDGESRKSGMPQTGFVQGNNDNNAKLFKLFLSEASEFYQTLIVKLRKHYGVPEEALFYKKGWISTFVEP DVKLKCRYLCHRCLVCMGDLARYKQQCENSDIQNHNWSVAATHYMEATRIWPNSGNPQNQLAVLATYIGDEFLALYHCVR SLAVKEPFPDAWNNIILLFEKNRSSSQQYVSSDVCFDFFKPFGRVGKETKAQLKDDYSNCNKVEDESSHFTDTKLWSLMV RMISFLFIPSSFEEFSSAFASAIGELDKMMELEDIELKDMLESYSQMALARRGPFRAIQVVSILIFSLKNLNDKHEKNES EDKNDWHLLQLAFTTSFIFMGRFIERCLNASSLNHCPLLPSVLVFVEWCSSIVDATEVCSTDQKSRKAISYFFDVFVELL NKLNDNRKETEKLLDATPLWEDYELRGFVPIACSHSSLNFCSNWDHIDNFKSGTELRAERIREAAMKIASRSNHLQKWIT CDKLGKQILVARPYEDQDRKKGENVKSNGNRTGGEEPNQQTNKNREKHGKWMTEDNPSSSSTDGKSSVVEEEEEVILFRP LTRYNSAPSYPSTSPDDQISPKDKDDQSLPSDDCLRRATSLLMAQTPDQTQTDPWGFHGSILNFTTDGPLKQQEPSTKES NVHTFSEAPISAGPPSLNAWVLDGGSLSNNRNNGTKGLNEHRLEPIEEIASSLAGLSINNSESLVISSVDESSNFNPSFA TYTIPLPSAPLLPENAAWFTDVQSTLSAPRFPVNSSPITGFSEWSPNYGPHGYDPGFPVSLSGYPPPGRMTSSEWLRWYR ENHKHNYMQPTYLNPHGNGNHENFMYHDTYRFDQFDRWGNAVPSNQRVYMEPPGPPPLHHGFVGAGEHKASLFNNFQTPI PYGCGGAVTDLRSEPQSLLECLKQKEWRLQHDPKLRGPTFMGD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 1000 | 1000 | 0.0 | – | |
PANTHER | 1 | 1000 | 1000 | 0.0 | – | |
Gene3D | 18 | 265 | 248 | 2.1E-54 | ||
SUPERFAMILY | 19 | 568 | 550 | 2.66E-78 | ||
Pfam | 68 | 187 | 120 | 3.0E-17 | ||
Pfam | 200 | 514 | 315 | 4.0E-55 | ||
MobiDBLite | 575 | 672 | 98 | - | – | |
MobiDBLite | 658 | 672 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0330500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…