Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi1g1v0050400.2

Overview

Field Value
Gene ID LotjaGi1g1v0050400
Transcript ID LotjaGi1g1v0050400.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Telomerase activating protein Est1; TAIR: AT5G19400.4 Telomerase activating protein Est1; Swiss-Prot: sp|A9QM73|SMG7_ARATH Protein SMG7; TrEMBL-Plants: tr|A0A072UH06|A0A072UH06_MEDTR Telomerase activating protein Est1; Found in the gene: LotjaGi1g1v0050400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:7202599..7209756) extracted from Lotus japonicus Gifu genome v1.2.

CGCCTCTTCCTCCACCAAACCCTACACCTTCCCTGATTTCGCACTGCACAGGTTCGATTTCTCTTCCCCTTTTTCCACAA TTCCCTCTTTCTCTTCGAATTCGCCATGCTTTGATTATCAATTATCAATCGTTTTCGAAGCTAATTGATCAGTTTTTTCA ATCTGTTCATATGTATCGATTTCACCGACCTGGTCTCGTTTTTCGCTATTCATCTCACTTTTTTTTTTGTCTAATTAGGC ATTGGGTGGTGTCAATTGTCAATTTTTGAGAATATTCAAGTTGATGTGTTAAGTTGAATTTGATTGAGTAGGGTTTTCAT CACAAATTCCGTAATTGTAATGATAAATAGAAAAAAATAGATTCTTGAATAGTTTGTAGTTGTACTGAGTTTGTTTTGTT GTCTCTTTGGACCAGCTTCATCAAGTAGGGTAAATTGGTTTTATTGAATTCTAGTTTTGAGTTTTACTTTTAGTGGGGGC ATTCAATGGGTGATCGTCTTATTGTGTCGGTTGCGCGGGAATTCGGTGAATAACAGTGTTACTTTTTTTTCAATTTGTAG TTACTTCAAACCTGATACTTGGAAGTTGGAACTAACCTATTTCTTTGGTTTTTGATTTGTAGGTTTTATGTAGCTTGAGT TGTGTCGGTGAATATTTGATGCATGATGATAGTTGAGATGGATAAAAAATCTGCTTCCCCATCATGGGAACGTGCAAAAC GCCTTTATGAGAAGGTACTCTCTCTCTCTGTATACGCAGACTAGGTCATGAATTTGATCACCGAATAAGGGCTTATCTTA TCTGTCTGAATCTCTGTTAATCTGCCAGTTATTTTCCCGTGTTATAATATCTCTGTCAGTGTTATCAAATAGCGGCTACG CCGCTATAGCGTAGCGGATTTTTGGCTAATCGCGACACCGCTAGTGCCCACTATAGCGGCCGAAATAGCGGATTTTTGGC TCACCGCGGTGGTCCGTGATCGTGATTTGACAACACTGATCTCTGTATATATAGTAGGTTACAATTTGGAGGATATGGCC TGATTTTCGTATATCTGTTTAAAATAATGAGTTTTTTTTGATTGGGGAAATTCTTCTTCCACTAATGGCAAGATAACTCC ATTTTGCAATGTTGGTTTTGCTGTCTCTGCTATGGTTCCATTTTGGAATTAGTGCTATACCTTATTATCAGTAGTTCAGT ACCCTCTGGTGTTGTTGCCTAGTACTGTCACATATTTTGGTGTTTTTGTCCCTTTGAATTTAGGTGGCCTTTTGCAACCA GCACTAGAGATGGCAAGAAAACCCAAACCCACGGGCCCCAACCCGAACCTGACCCAAAATTGTAGGCGAAACCCGATTTC TTTGGGTTTCACCCAAATTTTAAAACATGTTTGGGTTTGGGTGTGGGATTGATTAAACCCGCACCCAAACCCAAACCCAA ACCCGAAGTCTTATGCATGTAATTACCAACCCTCATATATATACTATTAAAGCTACTAAGTAGAGTTTTCTTTAAAGTTA CTAAGTAGGCTTATGTTCATGAACTATATTATTTCCTTTGTATTGGAATGATAATGAGGTTTAATCAGCTTATGTTCATG TTGTTCTCTTATGTACATGTTGTTTCCAGGTTGATATTTTTGATTTTTTGTCAGTTCGGTGCTCACATTGGGTTTTGGGT TTGGGTTCGGATAACCCGAAACCCAGGGGTTTGGGTTTGGGTTTGGGTTTAACTTTTGCACCCATATTGAATTTGGGTTT GGGTTTGGGTTTGAGTGGTAAGTTTGGGTTTGGGTGTAGGAATGGTCAAACCCGCACCCACGGGGCCCATTGCCAACCCC ACCACACTGGTGGCATGTACTTGTGAAGTTTTGAAATTATAAATATAAATTTAGTTTAAAATTTAGAACCTGTTATAACC TGCTTTTTATACCATGGCAAACCGTGAAGATTGCAGAATGTATAATCCTGTTGTTTGTGTGCTGTGGCTTACTTGTTCTT CTAATTACCTCATACGCAATTTTTTTCCTGTGGAATGAATTCATAAGGCATCCCTGCAATCTAATATACATATTTTTAAT TTAGAACCTTGAATTGGAGAATAAGCGCCGAAGATCATCTCAGGCGCAGGTCCCATCAGATCCAAATGCTTGGATGCAGA TCCGTGAGAATTATGAAGGAATAATTCTTGAGGATTATGTTTTTTCTCAGCAGCACAATATTGAATGTGCTCTGTGGCAA TTACATTATAAGCGTATTGAAGAATTACGGGCAAACTTTAGTGCTGCTGTTACTTCTGTAAGCTCTAAATCATCTCAAGG TGGGAAAGGTCCTATTCGACCGGATCGGATAACTAGAATAAGGCTGCAGTTTAAGACTTTCCTTTCAGAATCGACTGGAT TTTACCATGATCTTATTATGAAAATCAGAGCAAAGTATGGACTTCCTCTTGGTTACTTCGAGGACTCGGAGAATCGGGTT GTGATGGAGAAGGATGGAAAGAAATCTGCTGAGATGAAGAAAGGTTTAATATCTTGTCATCGTTGTTTGATATACTTGGG TGATCTTGCTCGCTACAAAGGATTGTATGGCGAGGTTGACTCCAAAAAACGCGAGTTTACAGCAGCTTCGAGTTACTATC TACAAGCTGCATCTATTTGGCCTCCAAGTGGGAACCCCCACCATCAGGTATTTTGCATGTTTTGTGGTTTTGTTTTGGTT ATTTCACGTCTCATATTTTGAACTGTGGTTTATAGCTATTGTAATCCATTTTGATGAATCTGTTAATTTCAGCTAGCTTT AGTGGCTTCATATACTGGAAATGAGTTGGCTGTTATTTATCGTTATTTTCGTAGTCTAGCTGTGGACAGTCCATGTACAA CTGCCAGGGACAATTTGATAGTCGCATTTGAGAAGGTAATACGACCATGTACTTGATTTTGAAATGCTCAACATTTTTAA TATTCAGAATTCTCCATTGTTTTATAAGTATATATCTTGTGTTTTTGTTTTTTATGTGCTATTCAACTTTGGTGCTCTTT TAATGTCCTGGCAACCTAAAGTGCGATTATTATGTTTCAAGTTCGGTCATTTGTACTACTTCTACTGTTTGATACTCAAA GCTTAATCCATTGAAGTTTAAGTTGTAAATTTCAGACAGGCTCGTCCATTAATTTTCATATGTTATTAAGACATGTGTTA GGCAGAGTTTGCGCATGTATTACTGGTGATACTAAACAGTAGTGTTTGAGGAAGTGTGAGAAGTTAAGGGAAAAGAAAGA AAATGACATGAGATAGTTTTATGAATTGTCCCATTTTACAACATAGACCAGCTTTATAGAGAATTAGGGAGGAAACTAAT TGCGTAACTACTCAACTACCTATCAGCTGTTAGTCTGTTACAACAACCTAGTAACTACTCAACTACCTAAAGCTGTTATA ACAACCTAGCCGACTCAGCACGAGTCTAGTATAACAGACTTCAGTAACTACAATCCCAAATATATAATTATACACAATGT TCTTAAAAACTGTGATGTTCACATAAAGAAAGTCTCGTTTTTCTTTATACATTATGTATAAAGAACGTCCATTTGACTCT ATACTATCGAACCATCCAATTTTACAAGCATTCTATAACATATATTGTCGTCATGAAATTCACAACTTGATAAATGTTAT GGCAACTTGATAAATAAAGAAAATCTTTTTATTTGGCAATTGCCTGTTGGGGATGAAGAATTTGCCTGAGCTTGATCCTC TGTTTATTGCTGTGGTGTATGGTGCTGGCCATTTTGCCTTATTTATTGATCTTTTTGACATTCTTTTATTGGTTTGCTAA CTATCTAATTTTATAATACCATGATAGAATCGCCAAAGTTACTCTCAGCTTTCTGGTGACGTTAAAGCTCTTGCAGTCCA GGAGTCTTCTGGGAAATTAGCTGGCAAAGGAAGAGGAAAAGTGGAAACCAAACATGTGACTAAGGGTGATGGTGTGGAAC CTTTACCTAGAAAGGCAGGAGCATCAAATATACAAGTGACCTACAAGTCCTTCTGCACTCGCTTTGTCCGTCTGAATGGA ATCTTGTTCACTCGTACAAGGCACATATCTTGATGCACACTCTATCTTACCTTTTATGAATTATACCATTAAGGATTAAT ACATTCTGACCTTTTCCCTTTTCTTTGTTTCTCATTTCATGACGATAGCCTTGAGAACTTCACTGAAGTACTCTCTCTTG TTAGAAATGGCCTGCGTGAGCTTCTTTCTTCAGGTCAAGATGAAGAGCTGAATTTCGGCATGGATATTCTTGAGAGTGGT CTTGCCATTGTCAGAATTGTTTCCATTATCATATTTACAGTTCATAATGTAAATAAGGAATCTGAAGGTCAAACCTACGC AGAAATAGTACATCGTGCTGCACTACTTCAGAATGCATTCACAGCAGCTTTTGAGTTGATGAGTTTCATAGTAGAGAGAT GTTTGCAGCTGCAGGATCCTTCCTGTAGTTATCTTTTACCAGGAATATTAGTTTTTGTTGAGTGGTTGGCATCTCATCCA GATCTTGCTGCAGGAAATGATGTGGATGAGAATCAAGCAATTGTTAGATCAAAATTTTGGAATTCTTGTATTTCCTTCTT GAACAAGCTACTTTCAGTTGGGGCTATTTCTATTGAAGACAATGAGGAGGAGACTTGCTTTAATAACATGAGCCGGTATG AAGAAGGGGAAACTAAAAACCGACTTGCTTTGTGGGAGGACTTCGAGTTAAGAGGATTTGTTCCACTTCTCCCTGCACAA ACAATCTTGGATTTTTCAAGGAAGCATTCCCTTGGAAGTGATGGTGAAAAGGAAAGAAAAGCTCGAGCCAAAAGAATTTT AGCTGCAGGAAAGGCTTTAGCAAATGTTGTTAGGATTGATCAGAAAATGATATATTTCGACTCCAAGGGAAGGAAATTTG TAATTGGTGTGAAGCCTCTAACTTCAGATGATTTTGTTCTTGCCTCCTATTCGAGCATACCTGATGTAAAAGATCTATTG AAAGAAAATACAGCAGACAAGACAAAGGCAGGAATTGTTCAGCCAGACCACCACCAGCATACGGAAGAAGAGGATGATGA TGAGATTATTGTTTTCAAACCTATAATGGCCGAGACACGAGCTGATACAGTGGTTGTCTCATCATGGGCATCCCATGAAG GCTTAGAGTCAGTTTCAACAGCTTCCGGAGGGAATATAAAACTTAATGCTATTTGTACTTCCAATGCTCTCAATGATGTG AACCATCAAACTACTTTACCTGTTTCTGTTAGTGGCATGGTGCCTCAACACTTACAACCAGTTCAGCCACATTATTCGAG CTGGTTAGAGGAAGAAATATCTCTTGCCAACAGTTTTAAAGGTCTTGGGTTTTTGGAGAATGGGCACATGATGAAACCTG ACCTGACACTTCAAGAAACTGTAGCAATCTCAAACCATGCTGCAACTGGAGTTCCTATCCAGCAATCTAAAAGTACTGCC ACTGGTGTATTTTATGGTATCTCAGGAGCTGAAGACTTAACAATATCATCCAAAGTTGATAATATCAATACTGATAACTC TGTTGTGAAGACATCATCAGCCTTGCAAGCTGGTTTGAAAAAATCTCCTGTTAGCCGACCTTCTAGACACCATGGACCTC CTCCTGGTTTCAGCCATGTACCTCCTCCTGGTTTCAGCCATGTTCCTCCTCCTGGTTTCAGCCATGTTCCTCCTAAACAA GTTATGGATGATTACAGTTGGATGGATGGATATCATTATCCTGCATCAACCAAAGATTTAGGCCCCAATAGTACTCTTAC TTACTCTCAGTCAAATCCTCAACAAGTCAGTAACAATGGATTGAGTGGGTCAGTCTGCTTTCCCTTCCCTGGAAAACAAG TTTCATCTGCACTGCAGGGGGGAAAACAGTATGGTTGGCAAGATTATCATACTTTTGAGCTTTTAAAAGCACACCAGAAT CAACAGCTGCAGCCACAACAACCACTCACAACAGAAAATCAGCATTCCACTCAACTGCCTGAGCAATTTCAAGGACAGTC AATCTGGACTAGTCATTCCTTTGTGTGATATCAGTATAAGAATATTGATGGTATGTTCTGATCTGGATTCATTGCTTTTG TTTGATGAATACCTTATTTTTTGTTTAAATTTTGTACATCTAACATAATTACATATTGGAGGTCCTTGAAGGATTATTAC AAATGTGCCATGCCTTCTCTGCCCATTCAAACTCCAATTCTGATGGCTTGTCATTGAATGTTGTTGGAGTTTTTTTGGCC TAGACTTGGTTCCAGGAACTTGTTACTACATAAGGTGAGTTCCAAATTATTCTTCGCACTGATAATATCTGTATTCTGTA GTGAACACAGCTTGAAATTTGGACAATCTTGTATGGCAAACTTATCCACTTTCATTGAATTTTAGAATTCCCATCTCGTG TTATACCTGACTGAATGAGCTACTGCTTTTGTTTTAGCCTGTCCTATATACTACTATCTTCTACAATATTGCTGGTTTGA AGTCTCAAGTATCATGGCCTTTTCTCCTCAACTTCTAAACTGGTGATTGATTGTTGAGTGGCACAATTTTCTTGGAAATT ATTGCAGGTTTTACTGAGCTCTCAAGCCTGAACAAGGAAGATAAGCATGTTGTTTGCGGTTCAAATTTCATAACTAAAAT GCGTTGTCTGGTTTGGGGTTGGATAGAAGGTGATATATAAAAGATTATCCAGCATGATGGAGCTTCTATCTTTTAGTATT GGTGCGTATGACTATGGTTTGTTCACTTCTCCAGTGGAAAATTTTCATAACAGTGCTCCTATACGAAATATTACCATCAT CTAGGTACCAATGATCCACTCTGCTAGCCCCTTTTGTTGTCTGAAGTTGCGGGGCATGTTCAAGTAATTACATGTGTTTA GTGGTTGCAACTTCATTAAGTTCTTATAATGTGTTCACATTATCCATGAGATACGGTTCACTTGTTTTTTTGCCAAGTTG GGATTTACTCAATCTTTTAGCTAAATAATGCCTGTTGGATGGTTTGATTGTTGATGTCGAGGTTTATATGAACAGAATAT ATCTATCTGTAATGATATTTAATTGCATCTATTTTCTC 

CDS sequence (LotjaGi1g1v0050400.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGATGATAGTTGAGATGGATAAAAAATCTGCTTCCCCATCATGGGAACGTGCAAAACGCCTTTATGAGAAGAACCTTGA ATTGGAGAATAAGCGCCGAAGATCATCTCAGGCGCAGGTCCCATCAGATCCAAATGCTTGGATGCAGATCCGTGAGAATT ATGAAGGAATAATTCTTGAGGATTATGTTTTTTCTCAGCAGCACAATATTGAATGTGCTCTGTGGCAATTACATTATAAG CGTATTGAAGAATTACGGGCAAACTTTAGTGCTGCTGTTACTTCTGTAAGCTCTAAATCATCTCAAGGTGGGAAAGGTCC TATTCGACCGGATCGGATAACTAGAATAAGGCTGCAGTTTAAGACTTTCCTTTCAGAATCGACTGGATTTTACCATGATC TTATTATGAAAATCAGAGCAAAGTATGGACTTCCTCTTGGTTACTTCGAGGACTCGGAGAATCGGGTTGTGATGGAGAAG GATGGAAAGAAATCTGCTGAGATGAAGAAAGGTTTAATATCTTGTCATCGTTGTTTGATATACTTGGGTGATCTTGCTCG CTACAAAGGATTGTATGGCGAGGTTGACTCCAAAAAACGCGAGTTTACAGCAGCTTCGAGTTACTATCTACAAGCTGCAT CTATTTGGCCTCCAAGTGGGAACCCCCACCATCAGCTAGCTTTAGTGGCTTCATATACTGGAAATGAGTTGGCTGTTATT TATCGTTATTTTCGTAGTCTAGCTGTGGACAGTCCATGTACAACTGCCAGGGACAATTTGATAGTCGCATTTGAGAAGAA TCGCCAAAGTTACTCTCAGCTTTCTGGTGACGTTAAAGCTCTTGCAGTCCAGGAGTCTTCTGGGAAATTAGCTGGCAAAG GAAGAGGAAAAGTGGAAACCAAACATGTGACTAAGGGTGATGGTGTGGAACCTTTACCTAGAAAGGCAGGAGCATCAAAT ATACAAGTGACCTACAAGTCCTTCTGCACTCGCTTTGTCCGTCTGAATGGAATCTTGTTCACTCGTACAAGCCTTGAGAA CTTCACTGAAGTACTCTCTCTTGTTAGAAATGGCCTGCGTGAGCTTCTTTCTTCAGGTCAAGATGAAGAGCTGAATTTCG GCATGGATATTCTTGAGAGTGGTCTTGCCATTGTCAGAATTGTTTCCATTATCATATTTACAGTTCATAATGTAAATAAG GAATCTGAAGGTCAAACCTACGCAGAAATAGTACATCGTGCTGCACTACTTCAGAATGCATTCACAGCAGCTTTTGAGTT GATGAGTTTCATAGTAGAGAGATGTTTGCAGCTGCAGGATCCTTCCTGTAGTTATCTTTTACCAGGAATATTAGTTTTTG TTGAGTGGTTGGCATCTCATCCAGATCTTGCTGCAGGAAATGATGTGGATGAGAATCAAGCAATTGTTAGATCAAAATTT TGGAATTCTTGTATTTCCTTCTTGAACAAGCTACTTTCAGTTGGGGCTATTTCTATTGAAGACAATGAGGAGGAGACTTG CTTTAATAACATGAGCCGGTATGAAGAAGGGGAAACTAAAAACCGACTTGCTTTGTGGGAGGACTTCGAGTTAAGAGGAT TTGTTCCACTTCTCCCTGCACAAACAATCTTGGATTTTTCAAGGAAGCATTCCCTTGGAAGTGATGGTGAAAAGGAAAGA AAAGCTCGAGCCAAAAGAATTTTAGCTGCAGGAAAGGCTTTAGCAAATGTTGTTAGGATTGATCAGAAAATGATATATTT CGACTCCAAGGGAAGGAAATTTGTAATTGGTGTGAAGCCTCTAACTTCAGATGATTTTGTTCTTGCCTCCTATTCGAGCA TACCTGATGTAAAAGATCTATTGAAAGAAAATACAGCAGACAAGACAAAGGCAGGAATTGTTCAGCCAGACCACCACCAG CATACGGAAGAAGAGGATGATGATGAGATTATTGTTTTCAAACCTATAATGGCCGAGACACGAGCTGATACAGTGGTTGT CTCATCATGGGCATCCCATGAAGGCTTAGAGTCAGTTTCAACAGCTTCCGGAGGGAATATAAAACTTAATGCTATTTGTA CTTCCAATGCTCTCAATGATGTGAACCATCAAACTACTTTACCTGTTTCTGTTAGTGGCATGGTGCCTCAACACTTACAA CCAGTTCAGCCACATTATTCGAGCTGGTTAGAGGAAGAAATATCTCTTGCCAACAGTTTTAAAGGTCTTGGGTTTTTGGA GAATGGGCACATGATGAAACCTGACCTGACACTTCAAGAAACTGTAGCAATCTCAAACCATGCTGCAACTGGAGTTCCTA TCCAGCAATCTAAAAGTACTGCCACTGGTGTATTTTATGGTATCTCAGGAGCTGAAGACTTAACAATATCATCCAAAGTT GATAATATCAATACTGATAACTCTGTTGTGAAGACATCATCAGCCTTGCAAGCTGGTTTGAAAAAATCTCCTGTTAGCCG ACCTTCTAGACACCATGGACCTCCTCCTGGTTTCAGCCATGTACCTCCTCCTGGTTTCAGCCATGTTCCTCCTCCTGGTT TCAGCCATGTTCCTCCTAAACAAGTTATGGATGATTACAGTTGGATGGATGGATATCATTATCCTGCATCAACCAAAGAT TTAGGCCCCAATAGTACTCTTACTTACTCTCAGTCAAATCCTCAACAAGTCAGTAACAATGGATTGAGTGGGTCAGTCTG CTTTCCCTTCCCTGGAAAACAAGTTTCATCTGCACTGCAGGGGGGAAAACAGTATGGTTGGCAAGATTATCATACTTTTG AGCTTTTAAAAGCACACCAGAATCAACAGCTGCAGCCACAACAACCACTCACAACAGAAAATCAGCATTCCACTCAACTG CCTGAGCAATTTCAAGGACAGTCAATCTGGACTAGTCATTCCTTTGTGTGA 

Protein sequence (LotjaGi1g1v0050400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MMIVEMDKKSASPSWERAKRLYEKNLELENKRRRSSQAQVPSDPNAWMQIRENYEGIILEDYVFSQQHNIECALWQLHYK RIEELRANFSAAVTSVSSKSSQGGKGPIRPDRITRIRLQFKTFLSESTGFYHDLIMKIRAKYGLPLGYFEDSENRVVMEK DGKKSAEMKKGLISCHRCLIYLGDLARYKGLYGEVDSKKREFTAASSYYLQAASIWPPSGNPHHQLALVASYTGNELAVI YRYFRSLAVDSPCTTARDNLIVAFEKNRQSYSQLSGDVKALAVQESSGKLAGKGRGKVETKHVTKGDGVEPLPRKAGASN IQVTYKSFCTRFVRLNGILFTRTSLENFTEVLSLVRNGLRELLSSGQDEELNFGMDILESGLAIVRIVSIIIFTVHNVNK ESEGQTYAEIVHRAALLQNAFTAAFELMSFIVERCLQLQDPSCSYLLPGILVFVEWLASHPDLAAGNDVDENQAIVRSKF WNSCISFLNKLLSVGAISIEDNEEETCFNNMSRYEEGETKNRLALWEDFELRGFVPLLPAQTILDFSRKHSLGSDGEKER KARAKRILAAGKALANVVRIDQKMIYFDSKGRKFVIGVKPLTSDDFVLASYSSIPDVKDLLKENTADKTKAGIVQPDHHQ HTEEEDDDEIIVFKPIMAETRADTVVVSSWASHEGLESVSTASGGNIKLNAICTSNALNDVNHQTTLPVSVSGMVPQHLQ PVQPHYSSWLEEEISLANSFKGLGFLENGHMMKPDLTLQETVAISNHAATGVPIQQSKSTATGVFYGISGAEDLTISSKV DNINTDNSVVKTSSALQAGLKKSPVSRPSRHHGPPPGFSHVPPPGFSHVPPPGFSHVPPKQVMDDYSWMDGYHYPASTKD LGPNSTLTYSQSNPQQVSNNGLSGSVCFPFPGKQVSSALQGGKQYGWQDYHTFELLKAHQNQQLQPQQPLTTENQHSTQL PEQFQGQSIWTSHSFV 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 12 968 957 0.0
PANTHER 12 968 957 0.0
Coils 18 38 21 -
SUPERFAMILY 19 595 577 7.59E-84
Gene3D 24 264 241 7.1E-57
Pfam 70 191 122 1.7E-16
Pfam 205 540 336 1.5E-66
MobiDBLite 814 858 45 -
MobiDBLite 829 857 29 -
MobiDBLite 940 963 24 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0050400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…