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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR020672
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.847s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj5g3v2166150.1
n.a. PREDICTED: probable ribose-5-phosphate isomerase-like [Glycine max] gi|356575632|ref|XP_003555942.1| chr5 30988075 30991343 +
2 domain predictions
2 GO terms
Lj5g3v2166160.1
n.a. PREDICTED: probable ribose-5-phosphate isomerase-like [Glycine max] gi|356575632|ref|XP_003555942.1| chr5 30988075 30990749 +
2 domain predictions
2 GO terms
LotjaGi1g1v0780100.1
n.a. Ribose-5-phosphate isomerase A; TAIR: AT3G04790.1 Ribose 5-phosphate isomerase, type A protein; Swiss-Prot: sp|Q9S726|RPI3_ARATH Probable ribose-5-phosphate isomerase 3, chloroplastic; TrEMBL-Plants: tr|A0A151TXP4|A0A151TXP4_CAJCA Putative ribose-5-phosphate isomerase; Found in the gene: LotjaGi1g1v0780100 LjG1.1_chr1 135190740 135191810 -
2 domain predictions
2 GO terms
LotjaGi1g1v0780100.2
n.a. Ribose-5-phosphate isomerase A; TAIR: AT3G04790.1 Ribose 5-phosphate isomerase, type A protein; Swiss-Prot: sp|Q9S726|RPI3_ARATH Probable ribose-5-phosphate isomerase 3, chloroplastic; TrEMBL-Plants: tr|A0A151TXP4|A0A151TXP4_CAJCA Putative ribose-5-phosphate isomerase; Found in the gene: LotjaGi1g1v0780100 LjG1.1_chr1 135190939 135191781 -
2 domain predictions
2 GO terms
LotjaGi5g1v0331100.1
n.a. Ribose-5-phosphate isomerase A; TAIR: AT2G01290.1 ribose-5-phosphate isomerase 2; Swiss-Prot: sp|Q9ZU38|RPI2_ARATH Probable ribose-5-phosphate isomerase 2; TrEMBL-Plants: tr|A0A1J7FSX7|A0A1J7FSX7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0331100 LjG1.1_chr5 64816942 64821564 +
2 domain predictions
2 GO terms
LotjaGi5g1v0331100.2
n.a. Ribose-5-phosphate isomerase A; TAIR: AT2G01290.1 ribose-5-phosphate isomerase 2; Swiss-Prot: sp|Q9ZU38|RPI2_ARATH Probable ribose-5-phosphate isomerase 2; TrEMBL-Plants: tr|A0A1J7FSX7|A0A1J7FSX7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0331100 LjG1.1_chr5 64816945 64820291 +
2 domain predictions
2 GO terms