Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR022052
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 15 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.710s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0057749.1
n.a. PREDICTED: glutamate-rich WD repeat-containing protein 1-like [Cicer arietinum] gi|502141015|ref|XP_004504409.1| chr0 18960587 18966505 -
2 domain predictions
 –
Lj0g3v0060589.1
n.a. PREDICTED: WD-40 repeat-containing protein MSI4-like [Glycine max] gi|356550442|ref|XP_003543596.1| chr0 20207044 20213089 +
2 domain predictions
 –
Lj3g3v0309020.1
n.a. PREDICTED: WD-40 repeat-containing protein MSI4-like [Glycine max] gi|356550442|ref|XP_003543596.1| chr3 2293683 2300857 -
2 domain predictions
 –
Lj4g3v0244120.1
n.a. WD-40 repeat protein [Pisum sativum] gi|69207914|gb|AAZ03745.1| chr4 2971371 2975664 +
2 domain predictions
 –
Lj4g3v0244130.1
n.a. WD-40 repeat protein [Pisum sativum] gi|69207914|gb|AAZ03745.1| chr4 2971371 2976847 +
2 domain predictions
 –
Lj4g3v2561510.1
n.a. PREDICTED: glutamate-rich WD repeat-containing protein 1-like [Cicer arietinum] gi|502141015|ref|XP_004504409.1| chr4 34300309 34305412 -
2 domain predictions
 –
Lj6g3v1259720.1
n.a. FVE [Pisum sativum] gi|61611729|gb|AAX47182.1| chr6 15408805 15414223 +
2 domain predictions
 –
LotjaGi3g1v0025800.1
n.a. WD-40 repeat protein; TAIR: AT2G19520.1 Transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|O22607|MSI4_ARATH WD-40 repeat-containing protein MSI4; TrEMBL-Plants: tr|A0A0R0GYQ4|A0A0R0GYQ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0025800 LjG1.1_chr3 2801016 2807649 -
2 domain predictions
 –
LotjaGi3g1v0520300.1
n.a. WD-40 repeat protein; TAIR: AT2G16780.1 Transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|O22468|MSI2_ARATH WD-40 repeat-containing protein MSI2; TrEMBL-Plants: tr|I3STN8|I3STN8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0520300 LjG1.1_chr3 93676875 93683334 +
2 domain predictions
 –
LotjaGi4g1v0022400.1
n.a. WD-40 repeat protein; TAIR: AT5G58230.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|O22466|MSI1_SOLLC WD-40 repeat-containing protein MSI1; TrEMBL-Plants: tr|Q1I184|Q1I184_PEA WD-40 repeat protein; Found in the gene: LotjaGi4g1v0022400 LjG1.1_chr4 2729609 2734394 +
2 domain predictions
 –
LotjaGi4g1v0022400.2
n.a. WD-40 repeat protein; TAIR: AT5G58230.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|O22466|MSI1_SOLLC WD-40 repeat-containing protein MSI1; TrEMBL-Plants: tr|Q1I184|Q1I184_PEA WD-40 repeat protein; Found in the gene: LotjaGi4g1v0022400 LjG1.1_chr4 2729813 2733903 +
2 domain predictions
 –
LotjaGi4g1v0366500.1
n.a. WD-repeat protein, putative; TAIR: AT2G19540.1 Transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q54ED4|GRWD1_DICDI Glutamate-rich WD repeat-containing protein 1; TrEMBL-Plants: tr|V7B033|V7B033_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0366500 LjG1.1_chr4 74619996 74627141 -
2 domain predictions
 –
LotjaGi4g1v0366500.2
n.a. WD-repeat protein, putative; TAIR: AT2G19540.1 Transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q54ED4|GRWD1_DICDI Glutamate-rich WD repeat-containing protein 1; TrEMBL-Plants: tr|V7B033|V7B033_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0366500 LjG1.1_chr4 74621538 74626515 -
2 domain predictions
 –
LotjaGi6g1v0231800.1
n.a. WD-40 repeat protein; TAIR: AT2G19520.1 Transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|O22607|MSI4_ARATH WD-40 repeat-containing protein MSI4; TrEMBL-Plants: tr|I1MH75|I1MH75_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0231800 LjG1.1_chr6 54067267 54076415 +
2 domain predictions
 –
LotjaGi6g1v0231800.2
n.a. WD-40 repeat protein; TAIR: AT2G19520.1 Transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|O22607|MSI4_ARATH WD-40 repeat-containing protein MSI4; TrEMBL-Plants: tr|I1MH75|I1MH75_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0231800 LjG1.1_chr6 54070428 54075564 +
2 domain predictions
 –