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IPR022052

Source: InterPro

Description

IPR022052 is a Histone-binding protein RBBP4, N-terminal.

<p>This entry rerpesnts the N-terminal domain of the histone-binding protein RBBP4. Proteins containing this domain include members from the WD repeat RBAP46 (RBBP7)/RBAP48(RBBP4)/MSI1 family.</p> <p>RBBP4 is a subunit of the chromatin assembly factor 1 (CAF-1) complex. The CAF-1 complex is a conserved heterotrimeric protein complex that promotes histone H3 and H4 deposition onto newly synthesized DNA during replication or DNA repair; specifically it facilitates replication-dependent nucleosome assembly with the major histone H3 (H3.1). This domain is an α helix which sits just upstream of the WD40 seven-bladed β-propeller in the human RBBP7 protein. RBBP7 folds into the β-propeller and binds histone H4 in a groove formed between this N-terminal helix and an extended loop inserted into blade six [[cite:PUB00050984]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 15

Transcript Name Description Predicted domains Domain count
Lj0g3v0057749.1
– PREDICTED: glutamate-rich WD repeat-containing protein 1-like [Cicer arietinum] gi|502141015|ref|XP_004504409.1|
Domains
14
Lj0g3v0060589.1
– PREDICTED: WD-40 repeat-containing protein MSI4-like [Glycine max] gi|356550442|ref|XP_003543596.1|
Domains
15
Lj3g3v0309020.1
– PREDICTED: WD-40 repeat-containing protein MSI4-like [Glycine max] gi|356550442|ref|XP_003543596.1|
Domains
15
Lj4g3v0244120.1
– WD-40 repeat protein [Pisum sativum] gi|69207914|gb|AAZ03745.1|
Domains
17
Lj4g3v0244130.1
– WD-40 repeat protein [Pisum sativum] gi|69207914|gb|AAZ03745.1|
Domains
14
Lj4g3v2561510.1
– PREDICTED: glutamate-rich WD repeat-containing protein 1-like [Cicer arietinum] gi|502141015|ref|XP_004504409.1|
Domains
14
Lj6g3v1259720.1
– FVE [Pisum sativum] gi|61611729|gb|AAX47182.1|
Domains
14
LotjaGi3g1v0025800.1
– WD-40 repeat protein; TAIR: AT2G19520.1 Transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|O22607|MSI4_ARATH WD-40 repeat-containing protein MSI4; TrEMBL-Plants: tr|A0A0R0GYQ4|A0A0R0GYQ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0025800
Domains
16
LotjaGi3g1v0520300.1
– WD-40 repeat protein; TAIR: AT2G16780.1 Transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|O22468|MSI2_ARATH WD-40 repeat-containing protein MSI2; TrEMBL-Plants: tr|I3STN8|I3STN8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0520300
Domains
18
LotjaGi4g1v0022400.1
– WD-40 repeat protein; TAIR: AT5G58230.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|O22466|MSI1_SOLLC WD-40 repeat-containing protein MSI1; TrEMBL-Plants: tr|Q1I184|Q1I184_PEA WD-40 repeat protein; Found in the gene: LotjaGi4g1v0022400
Domains
17
LotjaGi4g1v0022400.2
– WD-40 repeat protein; TAIR: AT5G58230.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|O22466|MSI1_SOLLC WD-40 repeat-containing protein MSI1; TrEMBL-Plants: tr|Q1I184|Q1I184_PEA WD-40 repeat protein; Found in the gene: LotjaGi4g1v0022400
Domains
17
LotjaGi4g1v0366500.1
– WD-repeat protein, putative; TAIR: AT2G19540.1 Transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q54ED4|GRWD1_DICDI Glutamate-rich WD repeat-containing protein 1; TrEMBL-Plants: tr|V7B033|V7B033_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0366500
Domains
14
LotjaGi4g1v0366500.2
– WD-repeat protein, putative; TAIR: AT2G19540.1 Transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q54ED4|GRWD1_DICDI Glutamate-rich WD repeat-containing protein 1; TrEMBL-Plants: tr|V7B033|V7B033_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0366500
Domains
14
LotjaGi6g1v0231800.1
– WD-40 repeat protein; TAIR: AT2G19520.1 Transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|O22607|MSI4_ARATH WD-40 repeat-containing protein MSI4; TrEMBL-Plants: tr|I1MH75|I1MH75_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0231800
Domains
15
LotjaGi6g1v0231800.2
– WD-40 repeat protein; TAIR: AT2G19520.1 Transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|O22607|MSI4_ARATH WD-40 repeat-containing protein MSI4; TrEMBL-Plants: tr|I1MH75|I1MH75_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0231800
Domains
15

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 6.67