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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR022966
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 9 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.702s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0320789.1
n.a. PREDICTED: exosome complex exonuclease RRP44-like [Cicer arietinum] gi|502153779|ref|XP_004509459.1| chr0 167416272 167421339 +
2 domain predictions
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Lj0g3v0327789.1
n.a. PREDICTED: DIS3-like exonuclease 2-like [Glycine max] gi|356550838|ref|XP_003543790.1| chr0 171356155 171363147 -
2 domain predictions
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Lj0g3v0327789.2
n.a. PREDICTED: DIS3-like exonuclease 2-like [Glycine max] gi|356550838|ref|XP_003543790.1| chr0 171356155 171363112 -
2 domain predictions
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LotjaGi1g1v0154400.1
n.a. DIS3-like exonuclease 2; TAIR: AT1G77680.1 Ribonuclease II/R family protein; Swiss-Prot: sp|P0DM58|DI3L2_ARATH DIS3-like exonuclease 2; TrEMBL-Plants: tr|A0A0R0GK53|A0A0R0GK53_SOYBN DIS3-like exonuclease 2; Found in the gene: LotjaGi1g1v0154400 LjG1.1_chr1 27381207 27390382 +
2 domain predictions
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LotjaGi4g1v0138200.1
n.a. DIS3-like exonuclease 2; TAIR: AT2G17510.1 ribonuclease II family protein; Swiss-Prot: sp|Q9SHL7|RP44A_ARATH Exosome complex exonuclease RRP44 homolog A; TrEMBL-Plants: tr|A0A0B2R0N8|A0A0B2R0N8_GLYSO Exosome complex exonuclease RRP44; Found in the gene: LotjaGi4g1v0138200 LjG1.1_chr4 20529003 20555632 +
2 domain predictions
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LotjaGi4g1v0138200.2
n.a. DIS3-like exonuclease 2; TAIR: AT2G17510.1 ribonuclease II family protein; Swiss-Prot: sp|Q9SHL7|RP44A_ARATH Exosome complex exonuclease RRP44 homolog A; TrEMBL-Plants: tr|A0A0B2R0N8|A0A0B2R0N8_GLYSO Exosome complex exonuclease RRP44; Found in the gene: LotjaGi4g1v0138200 LjG1.1_chr4 20529555 20554784 +
2 domain predictions
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LotjaGi4g1v0138200.4
n.a. DIS3-like exonuclease 2; TAIR: AT2G17510.1 ribonuclease II family protein; Swiss-Prot: sp|Q9SHL7|RP44A_ARATH Exosome complex exonuclease RRP44 homolog A; TrEMBL-Plants: tr|A0A0B2R0N8|A0A0B2R0N8_GLYSO Exosome complex exonuclease RRP44; Found in the gene: LotjaGi4g1v0138200 LjG1.1_chr4 20529555 20554784 +
2 domain predictions
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LotjaGi4g1v0138200.5
n.a. DIS3-like exonuclease 2; TAIR: AT2G17510.1 ribonuclease II family protein; Swiss-Prot: sp|Q9SHL7|RP44A_ARATH Exosome complex exonuclease RRP44 homolog A; TrEMBL-Plants: tr|A0A0B2R0N8|A0A0B2R0N8_GLYSO Exosome complex exonuclease RRP44; Found in the gene: LotjaGi4g1v0138200 LjG1.1_chr4 20530031 20554784 +
2 domain predictions
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LotjaGi4g1v0138200.6
n.a. DIS3-like exonuclease 2; TAIR: AT2G17510.1 ribonuclease II family protein; Swiss-Prot: sp|Q9SHL7|RP44A_ARATH Exosome complex exonuclease RRP44 homolog A; TrEMBL-Plants: tr|V7AVD4|V7AVD4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0138200 LjG1.1_chr4 20531376 20554784 +
2 domain predictions
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