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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

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  • IPR024072
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We have found 21 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.636s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0132579.1
n.a. PREDICTED: riboflavin biosynthesis protein RibD-like [Glycine max] gi|356506247|ref|XP_003521898.1| chr0 60515534 60518148 -
3 domain predictions
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Lj1g3v2835980.1
n.a. PREDICTED: riboflavin biosynthesis protein RibD-like [Cicer arietinum] gi|502105588|ref|XP_004492842.1| chr1 32204682 32209784 +
3 domain predictions
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Lj1g3v3381400.1
n.a. PREDICTED: bifunctional dihydrofolate reductase-thymidylate synthase-like [Cicer arietinum] gi|502130863|ref|XP_004500795.1| chr1 38811740 38813670 +
3 domain predictions
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Lj1g3v3381400.2
n.a. PREDICTED: bifunctional dihydrofolate reductase-thymidylate synthase-like [Cicer arietinum] gi|502130863|ref|XP_004500795.1| chr1 38811740 38815801 +
3 domain predictions
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Lj3g3v3363560.1
n.a. CM0216.390.nc [Lotus japonicus] gi|164564740|dbj|BAF98221.1| chr3 41406546 41411185 -
3 domain predictions
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Lj6g3v1177240.2
n.a. PREDICTED: transmembrane protein 184C-like, partial [Cicer arietinum] gi|502086156|ref|XP_004488127.1| chr6 14394900 14395559 +
2 domain predictions
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LotjaGi1g1v0486000.1
n.a. Riboflavin biosynthesis protein RibD; TAIR: AT3G47390.2 cytidine/deoxycytidylate deaminase family protein; Swiss-Prot: sp|Q9STY4|RIBRX_ARATH Riboflavin biosynthesis protein PYRR, chloroplastic; TrEMBL-Plants: tr|A0A1J7G1G5|A0A1J7G1G5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0486000 LjG1.1_chr1 99913085 99918192 +
3 domain predictions
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LotjaGi1g1v0486000.2
n.a. Riboflavin biosynthesis protein RibD; TAIR: AT3G47390.2 cytidine/deoxycytidylate deaminase family protein; Swiss-Prot: sp|K7WIZ6|RIBRX_MAIZE Riboflavin biosynthesis protein PYRR, chloroplastic; TrEMBL-Plants: tr|I1N3Z5|I1N3Z5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0486000 LjG1.1_chr1 99913097 99917248 +
3 domain predictions
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LotjaGi1g1v0486000.3
n.a. Riboflavin biosynthesis protein RibD; TAIR: AT3G47390.2 cytidine/deoxycytidylate deaminase family protein; Swiss-Prot: sp|K7WIZ6|RIBRX_MAIZE Riboflavin biosynthesis protein PYRR, chloroplastic; TrEMBL-Plants: tr|A0A1J7G1G5|A0A1J7G1G5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0486000 LjG1.1_chr1 99913098 99918629 +
3 domain predictions
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LotjaGi1g1v0565200.1
n.a. Thymidylate synthase; TAIR: AT2G16370.1 thymidylate synthase 1; Swiss-Prot: sp|P51820|DRTS_SOYBN Bifunctional dihydrofolate reductase-thymidylate synthase; TrEMBL-Plants: tr|I1K754|I1K754_SOYBN Bifunctional dihydrofolate reductase-thymidylate synthase; Found in the gene: LotjaGi1g1v0565200 LjG1.1_chr1 109856441 109861623 +
3 domain predictions
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LotjaGi1g1v0565200.2
n.a. Thymidylate synthase; TAIR: AT2G16370.1 thymidylate synthase 1; Swiss-Prot: sp|P51820|DRTS_SOYBN Bifunctional dihydrofolate reductase-thymidylate synthase; TrEMBL-Plants: tr|I1K753|I1K753_SOYBN Bifunctional dihydrofolate reductase-thymidylate synthase; Found in the gene: LotjaGi1g1v0565200 LjG1.1_chr1 109856569 109861091 +
3 domain predictions
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LotjaGi1g1v0565200.3
n.a. Thymidylate synthase; TAIR: AT2G16370.1 thymidylate synthase 1; Swiss-Prot: sp|P51820|DRTS_SOYBN Bifunctional dihydrofolate reductase-thymidylate synthase; TrEMBL-Plants: tr|I1K753|I1K753_SOYBN Bifunctional dihydrofolate reductase-thymidylate synthase; Found in the gene: LotjaGi1g1v0565200 LjG1.1_chr1 109857062 109860468 +
3 domain predictions
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LotjaGi1g1v0565200.4
n.a. Thymidylate synthase; TAIR: AT4G34570.4 thymidylate synthase 2; Swiss-Prot: sp|P51820|DRTS_SOYBN Bifunctional dihydrofolate reductase-thymidylate synthase; TrEMBL-Plants: tr|I1K753|I1K753_SOYBN Bifunctional dihydrofolate reductase-thymidylate synthase; Found in the gene: LotjaGi1g1v0565200 LjG1.1_chr1 109857226 109860468 +
3 domain predictions
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LotjaGi1g1v0565200.5
n.a. Bifunctional dihydrofolate reductase-thymidylate synthase; TAIR: AT2G16370.1 thymidylate synthase 1; Swiss-Prot: sp|P51820|DRTS_SOYBN Bifunctional dihydrofolate reductase-thymidylate synthase; TrEMBL-Plants: tr|I1K753|I1K753_SOYBN Bifunctional dihydrofolate reductase-thymidylate synthase; Found in the gene: LotjaGi1g1v0565200 LjG1.1_chr1 109857301 109858823 +
3 domain predictions
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LotjaGi1g1v0565200.6
n.a. Dihydrofolate reductase / thymidylate synthase; TAIR: AT4G34570.1 thymidylate synthase 2; Swiss-Prot: sp|P51820|DRTS_SOYBN Bifunctional dihydrofolate reductase-thymidylate synthase; TrEMBL-Plants: tr|I1K753|I1K753_SOYBN Bifunctional dihydrofolate reductase-thymidylate synthase; Found in the gene: LotjaGi1g1v0565200 LjG1.1_chr1 109857301 109860468 +
3 domain predictions
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LotjaGi1g1v0565200.7
n.a. Thymidylate synthase; TAIR: AT2G16370.1 thymidylate synthase 1; Swiss-Prot: sp|P51820|DRTS_SOYBN Bifunctional dihydrofolate reductase-thymidylate synthase; TrEMBL-Plants: tr|I1K753|I1K753_SOYBN Bifunctional dihydrofolate reductase-thymidylate synthase; Found in the gene: LotjaGi1g1v0565200 LjG1.1_chr1 109857301 109860468 +
3 domain predictions
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LotjaGi3g1v0510900.1
n.a. Thymidylate synthase; TAIR: AT4G34570.4 thymidylate synthase 2; Swiss-Prot: sp|P51820|DRTS_SOYBN Bifunctional dihydrofolate reductase-thymidylate synthase; TrEMBL-Plants: tr|B0BLI5|B0BLI5_LOTJA Bifunctional dihydrofolate reductase-thymidylate synthase; Found in the gene: LotjaGi3g1v0510900 LjG1.1_chr3 92798473 92807276 -
3 domain predictions
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LotjaGi3g1v0510900.2
n.a. Bifunctional dihydrofolate reductase-thymidylate synthase; TAIR: AT2G16370.1 thymidylate synthase 1; Swiss-Prot: sp|P51820|DRTS_SOYBN Bifunctional dihydrofolate reductase-thymidylate synthase; TrEMBL-Plants: tr|B0BLI5|B0BLI5_LOTJA Bifunctional dihydrofolate reductase-thymidylate synthase; Found in the gene: LotjaGi3g1v0510900 LjG1.1_chr3 92798473 92807276 -
3 domain predictions
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LotjaGi3g1v0510900.3
n.a. Thymidylate synthase; TAIR: AT4G34570.4 thymidylate synthase 2; Swiss-Prot: sp|P51820|DRTS_SOYBN Bifunctional dihydrofolate reductase-thymidylate synthase; TrEMBL-Plants: tr|B0BLI5|B0BLI5_LOTJA Bifunctional dihydrofolate reductase-thymidylate synthase; Found in the gene: LotjaGi3g1v0510900 LjG1.1_chr3 92803076 92806562 -
3 domain predictions
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LotjaGi3g1v0510900.4
n.a. Thymidylate synthase; TAIR: AT4G34570.4 thymidylate synthase 2; Swiss-Prot: sp|P51820|DRTS_SOYBN Bifunctional dihydrofolate reductase-thymidylate synthase; TrEMBL-Plants: tr|B0BLI5|B0BLI5_LOTJA Bifunctional dihydrofolate reductase-thymidylate synthase; Found in the gene: LotjaGi3g1v0510900 LjG1.1_chr3 92803076 92806643 -
3 domain predictions
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LotjaGi4g1v0345400.1
n.a. Riboflavin biosynthesis protein ribD; TAIR: AT4G20960.1 Cytidine/deoxycytidylate deaminase family protein; Swiss-Prot: sp|Q8GWP5|RIBD_ARATH Riboflavin biosynthesis protein PYRD, chloroplastic; TrEMBL-Plants: tr|A0A151T5Q7|A0A151T5Q7_CAJCA Riboflavin biosynthesis protein ribD; Found in the gene: LotjaGi4g1v0345400 LjG1.1_chr4 72515767 72519861 +
3 domain predictions
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