Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

SSF53597

Source: SUPERFAMILY

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 20

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0132579.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: riboflavin biosynthesis protein RibD-like [Glycine max] gi\|356506247\|ref\|XP_003521898.1\|	Domains G3DSA:3.40.140.10 G3DSA:3.40.430.10 IPR002125 IPR004794 IPR016192 IPR016193 IPR024072 PF00383 PS00903 PS51747 PTHR11079 PTHR11079:SF10 SSF53597 SSF53927 TIGR00326 cd01284	16
Lj1g3v2835980.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: riboflavin biosynthesis protein RibD-like [Cicer arietinum] gi\|502105588\|ref\|XP_004492842.1\|	Domains G3DSA:3.40.140.10 G3DSA:3.40.430.10 IPR002125 IPR002734 IPR004794 IPR011549 IPR012816 IPR016193 IPR024072 NON_CYTOPLASMIC_DOMAIN PF00383 PF01872 PF08719 PS51747 PTHR11079 PTHR11079:SF76 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF143990 SSF53597 SSF53927 SignalP-TM_GRAM_POSITIVE TIGR00227 TIGR00326 TIGR02464 cd15457	28
Lj1g3v3381400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: bifunctional dihydrofolate reductase-thymidylate synthase-like [Cicer arietinum] gi\|502130863\|ref\|XP_004500795.1\|	Domains G3DSA:3.30.572.10 G3DSA:3.40.430.10 IPR001796 IPR012259 IPR017925 IPR023451 IPR024072 PF00186 PF00303 PR00070 PS00075 PS51330 PTHR11548 PTHR11548:SF2 SSF53597 SSF55831 cd00209	17
Lj1g3v3381400.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: bifunctional dihydrofolate reductase-thymidylate synthase-like [Cicer arietinum] gi\|502130863\|ref\|XP_004500795.1\|	Domains G3DSA:3.30.572.10 G3DSA:3.40.430.10 IPR000398 IPR001796 IPR012262 IPR017925 IPR020940 IPR023451 IPR024072 MF_00008 PF00186 PF00303 PIRSF000389 PR00108 PS00075 PS00091 PS51330 PTHR11548 PTHR11548:SF2 SSF53597 SSF55831 TIGR03284 cd00209 cd00351	24
Lj3g3v3363560.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	CM0216.390.nc [Lotus japonicus] gi\|164564740\|dbj\|BAF98221.1\|	Domains G3DSA:3.30.572.10 G3DSA:3.40.430.10 IPR000398 IPR001796 IPR012262 IPR023451 IPR024072 MF_00008 PF00186 PF00303 PIRSF000389 PR00108 PS51330 PTHR11548 PTHR11548:SF2 SSF53597 SSF55831 TIGR03284 cd00209 cd00351	20
LotjaGi1g1v0486000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Riboflavin biosynthesis protein RibD; TAIR: AT3G47390.2 cytidine/deoxycytidylate deaminase family protein; Swiss-Prot: sp\|Q9STY4\|RIBRX_ARATH Riboflavin biosynthesis protein PYRR, chloroplastic; TrEMBL-Plants: tr\|A0A1J7G1G5\|A0A1J7G1G5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0486000	Domains G3DSA:1.10.357.40 G3DSA:3.40.140.10 G3DSA:3.40.430.10 IPR002125 IPR002734 IPR004794 IPR011549 IPR012816 IPR016193 IPR024072 IPR037238 NON_CYTOPLASMIC_DOMAIN PF00383 PF01872 PF08719 PS51747 PTHR11079 PTHR11079:SF168 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF143990 SSF53597 SSF53927 SignalP-TM TIGR00227 TIGR00326 TIGR02464 cd15457	30
LotjaGi1g1v0486000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Riboflavin biosynthesis protein RibD; TAIR: AT3G47390.2 cytidine/deoxycytidylate deaminase family protein; Swiss-Prot: sp\|K7WIZ6\|RIBRX_MAIZE Riboflavin biosynthesis protein PYRR, chloroplastic; TrEMBL-Plants: tr\|I1N3Z5\|I1N3Z5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0486000	Domains G3DSA:1.10.357.40 G3DSA:3.40.430.10 IPR002734 IPR004794 IPR011549 IPR012816 IPR024072 IPR037238 PF01872 PF08719 PTHR11079 PTHR11079:SF168 SSF143990 SSF53597 TIGR00227 TIGR00326 cd15457 mobidb-lite	18
LotjaGi1g1v0486000.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Riboflavin biosynthesis protein RibD; TAIR: AT3G47390.2 cytidine/deoxycytidylate deaminase family protein; Swiss-Prot: sp\|K7WIZ6\|RIBRX_MAIZE Riboflavin biosynthesis protein PYRR, chloroplastic; TrEMBL-Plants: tr\|A0A1J7G1G5\|A0A1J7G1G5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0486000	Domains G3DSA:1.10.357.40 G3DSA:3.40.430.10 IPR002734 IPR004794 IPR011549 IPR012816 IPR024072 IPR037238 PF01872 PF08719 PTHR11079 PTHR11079:SF168 SSF143990 SSF53597 TIGR00227 TIGR00326 TIGR02464 cd15457	18
LotjaGi1g1v0565200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Thymidylate synthase; TAIR: AT2G16370.1 thymidylate synthase 1; Swiss-Prot: sp\|P51820\|DRTS_SOYBN Bifunctional dihydrofolate reductase-thymidylate synthase; TrEMBL-Plants: tr\|I1K754\|I1K754_SOYBN Bifunctional dihydrofolate reductase-thymidylate synthase; Found in the gene: LotjaGi1g1v0565200	Domains G3DSA:3.30.572.10 G3DSA:3.40.430.10 IPR000398 IPR001796 IPR012262 IPR017925 IPR020940 IPR023451 IPR024072 IPR036926 MF_00008 PF00186 PF00303 PIRSF000389 PR00108 PS00075 PS00091 PS51330 PTHR11548 PTHR11548:SF11 SSF53597 SSF55831 TIGR03284 cd00209 cd00351	25
LotjaGi1g1v0565200.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Thymidylate synthase; TAIR: AT2G16370.1 thymidylate synthase 1; Swiss-Prot: sp\|P51820\|DRTS_SOYBN Bifunctional dihydrofolate reductase-thymidylate synthase; TrEMBL-Plants: tr\|I1K753\|I1K753_SOYBN Bifunctional dihydrofolate reductase-thymidylate synthase; Found in the gene: LotjaGi1g1v0565200	Domains G3DSA:3.30.572.10 G3DSA:3.40.430.10 IPR000398 IPR001796 IPR012262 IPR017925 IPR020940 IPR023451 IPR024072 IPR036926 MF_00008 PF00186 PF00303 PIRSF000389 PR00108 PS00075 PS00091 PS51330 PTHR11548 PTHR11548:SF11 SSF53597 SSF55831 TIGR03284 cd00209 cd00351	25
LotjaGi1g1v0565200.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Thymidylate synthase; TAIR: AT2G16370.1 thymidylate synthase 1; Swiss-Prot: sp\|P51820\|DRTS_SOYBN Bifunctional dihydrofolate reductase-thymidylate synthase; TrEMBL-Plants: tr\|I1K753\|I1K753_SOYBN Bifunctional dihydrofolate reductase-thymidylate synthase; Found in the gene: LotjaGi1g1v0565200	Domains G3DSA:3.30.572.10 G3DSA:3.40.430.10 IPR000398 IPR001796 IPR012262 IPR017925 IPR020940 IPR023451 IPR024072 IPR036926 MF_00008 PF00186 PF00303 PIRSF000389 PR00108 PS00075 PS00091 PS51330 PTHR11548 PTHR11548:SF11 SSF53597 SSF55831 TIGR03284 cd00209 cd00351	25
LotjaGi1g1v0565200.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Thymidylate synthase; TAIR: AT4G34570.4 thymidylate synthase 2; Swiss-Prot: sp\|P51820\|DRTS_SOYBN Bifunctional dihydrofolate reductase-thymidylate synthase; TrEMBL-Plants: tr\|I1K753\|I1K753_SOYBN Bifunctional dihydrofolate reductase-thymidylate synthase; Found in the gene: LotjaGi1g1v0565200	Domains G3DSA:3.30.572.10 G3DSA:3.40.430.10 IPR000398 IPR001796 IPR012262 IPR017925 IPR020940 IPR023451 IPR024072 IPR036926 PF00186 PF00303 PIRSF000389 PR00108 PS00075 PS00091 PS51330 PTHR11548 PTHR11548:SF11 SSF53597 SSF55831 TIGR03284 cd00209 cd00351	24
LotjaGi1g1v0565200.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Bifunctional dihydrofolate reductase-thymidylate synthase; TAIR: AT2G16370.1 thymidylate synthase 1; Swiss-Prot: sp\|P51820\|DRTS_SOYBN Bifunctional dihydrofolate reductase-thymidylate synthase; TrEMBL-Plants: tr\|I1K753\|I1K753_SOYBN Bifunctional dihydrofolate reductase-thymidylate synthase; Found in the gene: LotjaGi1g1v0565200	Domains G3DSA:3.30.572.10 G3DSA:3.40.430.10 IPR001796 IPR017925 IPR023451 IPR024072 IPR036926 PF00186 PF00303 PR00070 PS00075 PS51330 PTHR11548 PTHR11548:SF8 SSF53597 SSF55831 cd00209	17
LotjaGi1g1v0565200.6 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Dihydrofolate reductase / thymidylate synthase; TAIR: AT4G34570.1 thymidylate synthase 2; Swiss-Prot: sp\|P51820\|DRTS_SOYBN Bifunctional dihydrofolate reductase-thymidylate synthase; TrEMBL-Plants: tr\|I1K753\|I1K753_SOYBN Bifunctional dihydrofolate reductase-thymidylate synthase; Found in the gene: LotjaGi1g1v0565200	Domains G3DSA:3.30.572.10 G3DSA:3.40.430.10 IPR000398 IPR001796 IPR012262 IPR017925 IPR020940 IPR023451 IPR024072 IPR036926 PF00186 PF00303 PIRSF000389 PR00108 PS00075 PS00091 PS51330 PTHR11548 PTHR11548:SF11 SSF53597 SSF55831 TIGR03284 cd00209 cd00351	24
LotjaGi1g1v0565200.7 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Thymidylate synthase; TAIR: AT2G16370.1 thymidylate synthase 1; Swiss-Prot: sp\|P51820\|DRTS_SOYBN Bifunctional dihydrofolate reductase-thymidylate synthase; TrEMBL-Plants: tr\|I1K753\|I1K753_SOYBN Bifunctional dihydrofolate reductase-thymidylate synthase; Found in the gene: LotjaGi1g1v0565200	Domains G3DSA:3.30.572.10 G3DSA:3.40.430.10 IPR000398 IPR001796 IPR012262 IPR017925 IPR020940 IPR023451 IPR024072 IPR036926 MF_00008 PF00186 PF00303 PIRSF000389 PR00108 PS00075 PS00091 PS51330 PTHR11548 PTHR11548:SF11 SSF53597 SSF55831 TIGR03284 cd00209 cd00351	25
LotjaGi3g1v0510900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Thymidylate synthase; TAIR: AT4G34570.4 thymidylate synthase 2; Swiss-Prot: sp\|P51820\|DRTS_SOYBN Bifunctional dihydrofolate reductase-thymidylate synthase; TrEMBL-Plants: tr\|B0BLI5\|B0BLI5_LOTJA Bifunctional dihydrofolate reductase-thymidylate synthase; Found in the gene: LotjaGi3g1v0510900	Domains G3DSA:3.30.572.10 G3DSA:3.40.430.10 IPR000398 IPR001796 IPR012262 IPR020940 IPR023451 IPR024072 IPR036926 MF_00008 PF00186 PF00303 PIRSF000389 PR00108 PS00091 PS51330 PTHR11548 PTHR11548:SF11 SSF53597 SSF55831 TIGR03284 cd00209 cd00351	23
LotjaGi3g1v0510900.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Bifunctional dihydrofolate reductase-thymidylate synthase; TAIR: AT2G16370.1 thymidylate synthase 1; Swiss-Prot: sp\|P51820\|DRTS_SOYBN Bifunctional dihydrofolate reductase-thymidylate synthase; TrEMBL-Plants: tr\|B0BLI5\|B0BLI5_LOTJA Bifunctional dihydrofolate reductase-thymidylate synthase; Found in the gene: LotjaGi3g1v0510900	Domains G3DSA:3.30.572.10 G3DSA:3.40.430.10 IPR001796 IPR023451 IPR024072 IPR036926 PF00186 PF00303 PR00070 PS51330 PTHR11548 PTHR11548:SF8 SSF53597 SSF55831 cd00209	15
LotjaGi3g1v0510900.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Thymidylate synthase; TAIR: AT4G34570.4 thymidylate synthase 2; Swiss-Prot: sp\|P51820\|DRTS_SOYBN Bifunctional dihydrofolate reductase-thymidylate synthase; TrEMBL-Plants: tr\|B0BLI5\|B0BLI5_LOTJA Bifunctional dihydrofolate reductase-thymidylate synthase; Found in the gene: LotjaGi3g1v0510900	Domains G3DSA:3.30.572.10 G3DSA:3.40.430.10 IPR000398 IPR001796 IPR012262 IPR020940 IPR023451 IPR024072 IPR036926 PF00186 PF00303 PIRSF000389 PR00108 PS00091 PS51330 PTHR11548 PTHR11548:SF11 SSF53597 SSF55831 TIGR03284 cd00209 cd00351	22
LotjaGi3g1v0510900.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Thymidylate synthase; TAIR: AT4G34570.4 thymidylate synthase 2; Swiss-Prot: sp\|P51820\|DRTS_SOYBN Bifunctional dihydrofolate reductase-thymidylate synthase; TrEMBL-Plants: tr\|B0BLI5\|B0BLI5_LOTJA Bifunctional dihydrofolate reductase-thymidylate synthase; Found in the gene: LotjaGi3g1v0510900	Domains G3DSA:3.30.572.10 G3DSA:3.40.430.10 IPR000398 IPR001796 IPR012262 IPR020940 IPR023451 IPR024072 IPR036926 MF_00008 PF00186 PF00303 PIRSF000389 PR00108 PS00091 PS51330 PTHR11548 PTHR11548:SF11 SSF53597 SSF55831 TIGR03284 cd00209 cd00351	23
LotjaGi4g1v0345400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Riboflavin biosynthesis protein ribD; TAIR: AT4G20960.1 Cytidine/deoxycytidylate deaminase family protein; Swiss-Prot: sp\|Q8GWP5\|RIBD_ARATH Riboflavin biosynthesis protein PYRD, chloroplastic; TrEMBL-Plants: tr\|A0A151T5Q7\|A0A151T5Q7_CAJCA Riboflavin biosynthesis protein ribD; Found in the gene: LotjaGi4g1v0345400	Domains G3DSA:3.40.140.10 G3DSA:3.40.430.10 IPR002125 IPR004794 IPR016192 IPR016193 IPR024072 PF00383 PS00903 PS51747 PTHR11079 PTHR11079:SF162 SSF53597 SSF53927 TIGR00326 cd01284	16

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd01284	CDD	1	5.00