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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR024286
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 18 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.167s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0093169.1
n.a. aluminum induced protein with YGL and LRDR motifs [Arabidopsis thaliana] gi|18416995|ref|NP_567775.1| chr0 38928738 38930530 +
3 domain predictions
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Lj3g3v0652760.1
n.a. PREDICTED: stem-specific protein TSJT1-like [Fragaria vesca subsp]. vesca] gi|470110817|ref|XP_004291659.1| chr3 7042033 7052200 +
3 domain predictions
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Lj3g3v0652760.2
n.a. PREDICTED: stem-specific protein TSJT1-like [Glycine max] gi|356543282|ref|XP_003540091.1| chr3 7042033 7052538 +
3 domain predictions
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Lj3g3v0652760.3
n.a. PREDICTED: stem-specific protein TSJT1-like [Fragaria vesca subsp]. vesca] gi|470110817|ref|XP_004291659.1| chr3 7042033 7052200 +
3 domain predictions
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Lj3g3v0652760.4
n.a. PREDICTED: stem-specific protein TSJT1-like [Glycine max] gi|356543282|ref|XP_003540091.1| chr3 7042033 7043867 +
3 domain predictions
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Lj4g3v2400800.1
n.a. PREDICTED: stem-specific protein TSJT1-like [Cicer arietinum] gi|502151315|ref|XP_004508380.1| chr4 33168464 33172074 +
3 domain predictions
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Lj6g3v1880200.1
n.a. ARG10 [Vigna radiata] gi|2970051|dbj|BAA25187.1| chr6 20708689 20713141 -
3 domain predictions
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Lj6g3v2043320.1
n.a. PREDICTED: stem-specific protein TSJT1-like [Cicer arietinum] gi|502077826|ref|XP_004485756.1| chr6 24176787 24181642 -
3 domain predictions
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LotjaGi3g1v0049600.1
n.a. Stem-specific protein TSJT1; TAIR: AT4G27450.1 aluminum induced protein with YGL and LRDR motifs; Swiss-Prot: sp|P24805|TSJT1_TOBAC Stem-specific protein TSJT1; TrEMBL-Plants: tr|I3STI1|I3STI1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0049600 LjG1.1_chr3 5184643 5186848 +
3 domain predictions
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LotjaGi3g1v0049600.2
n.a. Stem-specific protein TSJT1; TAIR: AT4G27450.1 aluminum induced protein with YGL and LRDR motifs; Swiss-Prot: sp|P24805|TSJT1_TOBAC Stem-specific protein TSJT1; TrEMBL-Plants: tr|I3STI1|I3STI1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0049600 LjG1.1_chr3 5184999 5186490 +
3 domain predictions
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LotjaGi3g1v0076300.1
n.a. Stem-specific protein TSJT1; TAIR: AT4G27450.1 aluminum induced protein with YGL and LRDR motifs; Swiss-Prot: sp|P24805|TSJT1_TOBAC Stem-specific protein TSJT1; TrEMBL-Plants: tr|A0A151SR83|A0A151SR83_CAJCA Stem-specific protein TSJT1; Found in the gene: LotjaGi3g1v0076300 LjG1.1_chr3 8373473 8376385 +
3 domain predictions
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LotjaGi4g1v0054700.1
n.a. Stem-specific protein TSJT1; TAIR: AT4G27450.1 aluminum induced protein with YGL and LRDR motifs; Swiss-Prot: sp|P24805|TSJT1_TOBAC Stem-specific protein TSJT1; TrEMBL-Plants: tr|K7L2P5|K7L2P5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0054700 LjG1.1_chr4 6602420 6606392 -
3 domain predictions
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LotjaGi4g1v0352600.1
n.a. Stem-specific protein TSJT1; TAIR: AT5G19140.1 aluminum induced protein with YGL and LRDR motifs; Swiss-Prot: sp|P24805|TSJT1_TOBAC Stem-specific protein TSJT1; TrEMBL-Plants: tr|I3SXD3|I3SXD3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0352600 LjG1.1_chr4 73125395 73129691 +
3 domain predictions
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LotjaGi5g1v0309700.1
n.a. Stem-specific protein TSJT1; TAIR: AT3G22850.1 aluminum induced protein with YGL and LRDR motifs; Swiss-Prot: sp|P24805|TSJT1_TOBAC Stem-specific protein TSJT1; TrEMBL-Plants: tr|I3SRP3|I3SRP3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0309700 LjG1.1_chr5 62782421 62785553 -
3 domain predictions
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LotjaGi6g1v0002300.1
n.a. Stem-specific protein TSJT1; TAIR: AT5G43830.1 aluminum induced protein with YGL and LRDR motifs; Swiss-Prot: sp|P24805|TSJT1_TOBAC Stem-specific protein TSJT1; TrEMBL-Plants: tr|I3SFA9|I3SFA9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0002300 LjG1.1_chr6 590384 595701 -
3 domain predictions
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LotjaGi6g1v0297300.1
n.a. Stem-specific protein TSJT1; TAIR: AT5G19140.1 aluminum induced protein with YGL and LRDR motifs; Swiss-Prot: sp|P24805|TSJT1_TOBAC Stem-specific protein TSJT1; TrEMBL-Plants: tr|K7MAQ4|K7MAQ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0297300 LjG1.1_chr6 61480871 61486854 -
3 domain predictions
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LotjaGi6g1v0297300.2
n.a. Stem-specific protein TSJT1; TAIR: AT5G19140.1 aluminum induced protein with YGL and LRDR motifs; Swiss-Prot: sp|P24805|TSJT1_TOBAC Stem-specific protein TSJT1; TrEMBL-Plants: tr|K7MAQ4|K7MAQ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0297300 LjG1.1_chr6 61482412 61486159 -
3 domain predictions
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LotjaGi6g1v0334000.1
n.a. Stem-specific TSJT1-like protein; TAIR: AT4G27450.1 aluminum induced protein with YGL and LRDR motifs; Swiss-Prot: sp|P24805|TSJT1_TOBAC Stem-specific protein TSJT1; TrEMBL-Plants: tr|I3SHM9|I3SHM9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0334000 LjG1.1_chr6 64860227 64876005 +
3 domain predictions
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