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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR027110
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 17 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.129s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v1525990.1
n.a. PREDICTED: pyruvate dehydrogenase E1 component subunit beta, mitochondrial-like [Cicer arietinum] gi|502100181|ref|XP_004491655.1| chr1 18140692 18142026 +
2 domain predictions
2 GO terms
Lj1g3v5062780.1
n.a. PREDICTED: pyruvate dehydrogenase E1 component subunit beta, mitochondrial-like [Glycine max] gi|356552857|ref|XP_003544779.1| chr1 62274694 62280734 +
2 domain predictions
2 GO terms
Lj1g3v5062780.2
n.a. PREDICTED: pyruvate dehydrogenase E1 component subunit beta, mitochondrial-like [Glycine max] gi|356552857|ref|XP_003544779.1| chr1 62274694 62280734 +
2 domain predictions
2 GO terms
Lj2g3v3188500.1
n.a. PREDICTED: pyruvate dehydrogenase E1 component subunit beta, mitochondrial-like [Cicer arietinum] gi|502100181|ref|XP_004491655.1| chr2 41022801 41023297 -
2 domain predictions
2 GO terms
LotjaGi1g1v0341000_LC.1
n.a. Pyruvate dehydrogenase E1 component subunit beta; TAIR: AT5G50850.1 Transketolase family protein; Swiss-Prot: sp|P52904|ODPB_PEA Pyruvate dehydrogenase E1 component subunit beta, mitochondrial; TrEMBL-Plants: tr|A0A0D2RG08|A0A0D2RG08_GOSRA Uncharacterized protein; Found in the gene: LotjaGi1g1v0341000_LC LjG1.1_chr1 80304585 80306233 +
2 domain predictions
2 GO terms
LotjaGi1g1v0801100.1
n.a. 1-deoxy-D-xylulose 5-phosphate synthase 1; TAIR: AT5G50850.1 Transketolase family protein; Swiss-Prot: sp|Q6Z1G7|ODPB1_ORYSJ Pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial; TrEMBL-Plants: tr|I1JJD2|I1JJD2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0801100 LjG1.1_chr1 137157303 137164233 +
2 domain predictions
2 GO terms
LotjaGi1g1v0801100.2
n.a. 1-deoxy-D-xylulose 5-phosphate synthase 1; TAIR: AT5G50850.1 Transketolase family protein; Swiss-Prot: sp|Q6Z1G7|ODPB1_ORYSJ Pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial; TrEMBL-Plants: tr|I1JJD2|I1JJD2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0801100 LjG1.1_chr1 137157932 137162520 +
2 domain predictions
2 GO terms
LotjaGi1g1v0801100.3
n.a. 1-deoxy-D-xylulose 5-phosphate synthase 1; TAIR: AT5G50850.1 Transketolase family protein; Swiss-Prot: sp|Q6Z1G7|ODPB1_ORYSJ Pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial; TrEMBL-Plants: tr|I1JJD2|I1JJD2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0801100 LjG1.1_chr1 137157934 137162520 +
2 domain predictions
2 GO terms
LotjaGi1g1v0801100.4
n.a. 1-deoxy-D-xylulose 5-phosphate synthase 1; TAIR: AT5G50850.1 Transketolase family protein; Swiss-Prot: sp|Q6Z1G7|ODPB1_ORYSJ Pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial; TrEMBL-Plants: tr|I1JJD2|I1JJD2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0801100 LjG1.1_chr1 137158000 137162520 +
2 domain predictions
2 GO terms
LotjaGi1g1v0801100.5
n.a. 1-deoxy-D-xylulose 5-phosphate synthase 1; TAIR: AT5G50850.1 Transketolase family protein; Swiss-Prot: sp|Q6Z1G7|ODPB1_ORYSJ Pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial; TrEMBL-Plants: tr|I1JJD2|I1JJD2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0801100 LjG1.1_chr1 137158089 137162520 +
2 domain predictions
2 GO terms
LotjaGi1g1v0801200.1
n.a. 1-deoxy-D-xylulose 5-phosphate synthase 1; TAIR: AT5G50850.1 Transketolase family protein; Swiss-Prot: sp|Q6Z1G7|ODPB1_ORYSJ Pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial; TrEMBL-Plants: tr|I1JJD2|I1JJD2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0801200 LjG1.1_chr1 137169056 137175542 +
2 domain predictions
2 GO terms
LotjaGi1g1v0801200.2
n.a. 1-deoxy-D-xylulose 5-phosphate synthase 1; TAIR: AT5G50850.1 Transketolase family protein; Swiss-Prot: sp|Q6Z1G7|ODPB1_ORYSJ Pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial; TrEMBL-Plants: tr|I1JJD2|I1JJD2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0801200 LjG1.1_chr1 137169065 137174947 +
2 domain predictions
2 GO terms
LotjaGi4g1v0360000.1
n.a. 1-deoxy-D-xylulose 5-phosphate synthase 1; TAIR: AT2G34590.1 Transketolase family protein; Swiss-Prot: sp|O64688|ODPB3_ARATH Pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic; TrEMBL-Plants: tr|I3SEX4|I3SEX4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0360000 LjG1.1_chr4 73899892 73906467 -
2 domain predictions
2 GO terms
LotjaGi4g1v0360000.2
n.a. 1-deoxy-D-xylulose 5-phosphate synthase 1; TAIR: AT1G30120.1 pyruvate dehydrogenase E1 beta; Swiss-Prot: sp|Q9C6Z3|ODPB2_ARATH Pyruvate dehydrogenase E1 component subunit beta-2, chloroplastic; TrEMBL-Plants: tr|I3SEX4|I3SEX4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0360000 LjG1.1_chr4 73901706 73902977 -
2 domain predictions
2 GO terms
LotjaGi4g1v0360000.3
n.a. 1-deoxy-D-xylulose 5-phosphate synthase 1; TAIR: AT1G30120.1 pyruvate dehydrogenase E1 beta; Swiss-Prot: sp|Q9C6Z3|ODPB2_ARATH Pyruvate dehydrogenase E1 component subunit beta-2, chloroplastic; TrEMBL-Plants: tr|I3SEX4|I3SEX4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0360000 LjG1.1_chr4 73901706 73902977 -
2 domain predictions
2 GO terms
LotjaGi6g1v0310500.1
n.a. 1-deoxy-D-xylulose 5-phosphate synthase 1; TAIR: AT2G34590.1 Transketolase family protein; Swiss-Prot: sp|O64688|ODPB3_ARATH Pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic; TrEMBL-Plants: tr|V7BPK8|V7BPK8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0310500 LjG1.1_chr6 62925610 62929365 -
2 domain predictions
2 GO terms
LotjaGi6g1v0310500.2
n.a. 1-deoxy-D-xylulose 5-phosphate synthase 1; TAIR: AT1G30120.1 pyruvate dehydrogenase E1 beta; Swiss-Prot: sp|Q9C6Z3|ODPB2_ARATH Pyruvate dehydrogenase E1 component subunit beta-2, chloroplastic; TrEMBL-Plants: tr|A0A0L9VFW6|A0A0L9VFW6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0310500 LjG1.1_chr6 62925938 62927207 -
2 domain predictions
2 GO terms