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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR030006
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.503s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj4g3v2436020.1
n.a. CRY [Pisum sativum] gi|113206404|gb|ABI34432.1| chr4 33601411 33603706 +
2 domain predictions
2 GO terms
Lj6g3v0433880.1
n.a. DELLA protein [Phaseolus vulgaris] gi|148189864|dbj|BAF62637.1| chr6 4010802 4013307 +
2 domain predictions
2 GO terms
LotjaGi4g1v0359300.1
n.a. GAI-like protein 1; TAIR: AT2G01570.1 GRAS family transcription factor family protein; Swiss-Prot: sp|Q5BN23|RGA1_BRACM DELLA protein RGA1; TrEMBL-Plants: tr|B2BA71|B2BA71_PEA CRY; Found in the gene: LotjaGi4g1v0359300 LjG1.1_chr4 73802466 73805395 +
2 domain predictions
2 GO terms
LotjaGi6g1v0058600.1
n.a. GAI-like protein 1; TAIR: AT2G01570.1 GRAS family transcription factor family protein; Swiss-Prot: sp|Q84TQ7|GAI_GOSHI DELLA protein GAI; TrEMBL-Plants: tr|A0A0L9U8W1|A0A0L9U8W1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0058600 LjG1.1_chr6 10704336 10706959 +
2 domain predictions
2 GO terms
LotjaGi6g1v0058600.2
n.a. GAI-like protein 1; TAIR: AT2G01570.1 GRAS family transcription factor family protein; Swiss-Prot: sp|Q84TQ7|GAI_GOSHI DELLA protein GAI; TrEMBL-Plants: tr|A0A0L9U8W1|A0A0L9U8W1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0058600 LjG1.1_chr6 10704665 10706603 +
2 domain predictions
2 GO terms
LotjaGi6g1v0058600.3
n.a. GAI-like protein 1; TAIR: AT3G03450.1 RGA-like 2; Swiss-Prot: sp|Q84TQ7|GAI_GOSHI DELLA protein GAI; TrEMBL-Plants: tr|A0A0L9U8W1|A0A0L9U8W1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0058600 LjG1.1_chr6 10704691 10706451 +
2 domain predictions
2 GO terms