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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0065639 |
| Transcript ID | Lj0g3v0065639.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: somatic embryogenesis receptor kinase 1-like [Glycine max] gi|356576127|ref|XP_003556185.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 211 | 211 | – | – | |
| PANTHER | 1 | 581 | 581 | 0 | ||
| PANTHER | 1 | 581 | 581 | 0 | – | |
| Pfam | 2 | 39 | 38 | 3.10E-09 | ||
| Gene3D | 3 | 157 | 155 | 7.30E-43 | ||
| SUPERFAMILY | 4 | 166 | 163 | 7.82E-40 | ||
| Pfam | 140 | 156 | 17 | 1.2 | ||
| Gene3D | 186 | 288 | 103 | 1.20E-13 | ||
| Phobius | 212 | 235 | 24 | – | – | |
| TMHMM | 213 | 235 | 23 | – | – | |
| Phobius | 236 | 598 | 363 | – | – | |
| SUPERFAMILY | 253 | 550 | 298 | 2.19E-78 | ||
| SMART | 275 | 549 | 275 | 9.60E-32 | ||
| ProSiteProfiles | 275 | 562 | 288 | 36.16 | ||
| Pfam | 276 | 547 | 272 | 4.70E-45 | ||
| ProSitePatterns | 281 | 303 | 23 | – | ||
| Gene3D | 289 | 352 | 64 | 3.10E-23 | – | |
| Gene3D | 354 | 565 | 212 | 1.30E-44 | – | |
| ProSitePatterns | 398 | 410 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Transmembrane receptor protein serine/threonine kinase activity | Combining with a signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: ATP protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate. | ||
| Molecular function | Signaling receptor binding | Interacting selectively and non-covalently with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj0g3v0065639.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0065639.2, powered by CORGI.
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