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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0096200 |
| Transcript ID | LotjaGi2g1v0096200.3 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase; TAIR: AT1G71830.1 somatic embryogenesis receptor-like kinase 1; Swiss-Prot: sp|Q94AG2|SERK1_ARATH Somatic embryogenesis receptor kinase 1; TrEMBL-Plants: tr|A0A1J7FTK8|A0A1J7FTK8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0096200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:31483471..31489811) extracted from Lotus japonicus Gifu genome v1.2.
GCTTATCCTAATGTGCTGATTCAGATACTGTTGGACCTCCTTTTGTTTTTATTCGGCTTGAAAATGTATTTCTCAAATTC AATCAAGATGGTGCATTCTTAGCTGTAGTGTCTAGCTAATTTTTCTTGCAACTTGGCATCTGGGGATGATCATGAGTGAC TTGATCCCCAAGTGTAATTTGACTTTTGATTTTACACCATCTGATCTTATGTTCTTGTATTTTGAAATAGGGGATGCATT ACATGGCCTCAGGACAAATTTACAAGACCCTAACAATGTTTTGCAAAGTTGGGACCCTACACTGGTCAATCCATGTACGT GGTTTCATGTAACATGCAACAATGATAATAGTGTCATAAGAGTGTAAGCTTAATGTTCCTTGATATCTTTTATATACATG TTCATTCTGTTTGTGAAACTTTGCACAGCTTAATTTCATATGGGATTTGACATTTTTCTTTTCATGTTTCTTTGCTCTGG TCTGACATCAGTGATCTGGGAAATGCTGCTCTATCTGGTCAACTTGTTCCTCAGCTTGGCCAACTCAAGAACTTACAGTA TTTGTATGTTACTCTTATATGGACTTGGTTAATGATGGGTTGTCTGTGCCTTAACTTCCTTTTTGTTAATATTCAGTTGA TAGTTAAATCTTCTATACAATTGTAGTATTAGAAAGACCTTCTAATCATTTGGAGAAATACAGTCCAGTTTGTATATTGT CATTTCAATAGAGTTGCATATAAGCTGAAATCATTGTGGAACAGTATTTTTCTACTAATATAGTCTTAATGGCCGATAAG TCCTATAATATCCAAGGCTATGTTATGTACATGATTATTCTCTGTTTTAAGTTTTGTCCTTGCCGCAATGAGTCATCCAG TAAGGTATTGCTATTATTAATTAATGAGGTTCAGAAGTTGCATTTGACTTGATTGGATGTTTCATAAGAGGTACTCTGAG GCTTTTTGCATTTTGGGTTTCTGTGGATCATATTCTAAATGTTCTAATATTTGAAAAGGGCCTTTTTTAGATTTTATCCA TGATCGGATTTTCCTGTATTTGTATGTACATTTGATTTCGGCCTGAAGAAAATAGTTGCACAATTTCATCACCATTAATT CTTTTAAATAACTTTTATAACTTTTGCAGCTGCATTACTCTTATTCTGATTACTGGAGCGTGCTCTTTAAACATATTAGG GGATGGCCTAGTAGTTTCACTTATAAAATTCTTGAAGTTATTATGAAATTAACTTGATGCTGATTTTAACACTTAATGTT AATTTAAATATTTGAGTTCTTCATATTTTTTAATACATTTCTGTTCCATAACAGGGAACTCTACAGCAATAACATTAGTG GTCCAATTCCAAGTGACTTGGGGAATCTTACTAGCTTGGTGAGCTTGGATCTGTACCTAAACCATTTCAGTGGTCCTATC CCTGATTCATTGGGCAAGCTATCCAAATTGCGTTTCCTGTGAGTATATGTTGACATTCTTGGTATAAGCTAAAGTGCCAT CTTCCTGATGTCAAATGTTGGGTTGAGATGATACAACAAACTCTTATGGATTATAACAAATCTAAACCCTAGATTAATCA CATCCAACTATGATTTAGGGTTTGATGTCAATTCTGTGTATTAACTGGAGTGCTATACAAACTTGAAATATGCTATTTGA CAGTTATAATTTATAAACAAGGGTATCATTTTTAGTTCCAAATGCTTCTTGAAATAGTGAGTTAGATCTGTTCTTAGAGA AAGAAATTTCATGCTATTCATATCTATCATCCCAAAATTACTATCATGTAATTGATATCTGTTGTTACTTTGATATAAAT TGCTATCATTTTTCTGTCAAACGGCGAAACTGTAAAAGCTTGTTTAATGTTTTGGTGCCTTTGAATATGTTATTTTTCTT GGTATCTCTGTAGATCTAATACTGCTTTCCTTGTCTGTTTGTCCAAGGATAGCCGGCTTAATAATAACAGCTTGACGGGT CCTATTCCCATGCCACTAACTAATATTTCAGCTCTCCAAGTGCTGTAAGTGCTAGTTTTGCTCAACATATGTGGTTTATT TCCCTCCTCGACATTTATTTACACTGCTTATTTATTGTTCTCAATCTTGTTAAATTGTAGGGATTTGTCTAATAACCGTC TCTCAGGTGTGGTTCCTGATAATGGCTCCTTCTCATTATTCACTCCTATCAGGTAATTTACTCAGCTTTAAGCTATTCTT GCATTTATTCCCGAGCTGTTAAAGATTTCTAATTGAACTGCCCTTCTTGTAGTTTTACCAATAACTTGGATCTATGTGGC CCTGTCACTGGGCACCCTTGTCCTGGATCTCCTCCATTTTCTCCTCCTCCCCCATTTGTCCCACCGCCCCCTATCTCAAC TCCAGGTTATCTTTATTGCTGTTTTGAAGCTTTGAGAGTAGATAGAAGTTATGTACAAGTTTGGCATATTTTCTATTGCT ATTGCTTTTAGTTATCCAAGTCCAAGCTGTTTTCTTAGCCTGGATTTTAAATTAAACCTTGTGTTAAACATATGGTGGTG GCTATTTAAACTTTTACGCCTGATGTGGTTACAATGACTGGTCATGTTCCGTCACTTGTTCTTTTTTAGTATTTATTAAT TGGCATTTAATTATGTACCTGAGTATGGTGTTTCCTCATTCAATGTTTTAGAGCATTTTTGGAAACCAGTTTTCTCCAAT GTGAAAGCACAATCACATGAGTTTCGAGAGAAAAAGTAAAGGAACTTGGTTGTTCTGGTAGCTTGAAAGTTCTTTTAGAG CAACTTGTATTCAAACAGACACTTAGTAGCCCTTACTTCATATTATTTTATATAATGTATTCAAGCTGTGTTGCGTCCTT ATTATTTTAATTTGTTGTGTCATGTCTATGTCTGGTGTCCCCTGTTGTGTTGTTGCTTCCTAGATCCTTGGTCAGCTATA TCTTATAAAAGGTTCAATCTCTGTTTTTACTACATTTTTAAAGTTGTGTTGTTATTTATATTCTCTGAAACTTCGAGATA AAAGCACTCATGGTCCCACCTTACTGTATTTAATTACAGGAGGTAGTGGTGCCACTGGTGCAATAGCGGGAGGAGTAGCT GCAGGTGCTGCTCTATTATTTGCTGTTCCTGCAATTGCGTTTGCATGGTGGCGTCGAAGGAAACCACAAGAATTTTTCTT TGATGTGCCTGGTGAGCTATCGCATCTGAATGAATACTGCATTGCTTGAACAAATTAACTAGATGGATTTTAACTTCCTT GCGTCTATTTGCAGGTGAAGAGGATCCGGAAGTACATCTTGGGCAGCTTAAGAGATTCTCGCTACGAGAACTACAAGTTG CAACAGATACTTTCAGCAATAAGAACATTCTTGGAAGGGGAGGATTTGGTAAAGTTTACAAAGGACGCTTGGCAGATGGT ACATTGGTTGCTGTGAAAAGATTGAAAGAAGAGCGCACACCTGGTGGGGAGCTTCAGTTTCAGACTGAAGTAGAAATGAT CAGCATGGCTGTGCATCGAAATCTCCTCCGTTTACGTGGGTTCTGTATGACGCCGACTGAAAGGCTCCTTGTTTATCCTT ACATGGCTAATGGAAGCGTTGCCTCATGCTTAAGAGGTAGGTTGTTTGCATTTTCCTCCCCTAGACTTTATGGAATGTCT TAGGCTGTTTAAGTAACAAAATAGAACATACCTTGTGTAAAAGCTTGTACTCTGGTCTTTTGCTGAGGAGTAACTTGAGG TTTTCAGGGGATGGAAATGAGTTTAACTATGATATCAGTTTGGCTTTTACTTTCTTAGAAAATCCACACTTCCCTTTCTT AAGCCCCCCTCATTGTGGTAGTTACAGTTCCTCTAGTCTTTCACTTCTACCTCTTCCTCATCACCAGGTACAAAAATATA TAGTTGTAAGGTGCTCCAGCTCTCGCCTGTTGAAAGAATAATAATAATAATAATAATGAAATTGTTAAGTTGTGGTTTAT ATCTGTACACCCGTGGTTTGGCCAAGTTCACTTGTGTCACCTATGGTTTAAAAGAACTTCTAGTGAAGTCCCAAGACTTC TGTCAATAAAATAACGTTTAGCAAAGTCAGGAATATAGTAAATAAGTCAAAAACCACTCAAGCATTAGCTCTTTTCTTTT CTTTTTCGTGTTTTTCTACAGTCTACACATTAAGCATTGAAGTCTAGCATTTTTTTGGGTTCAAGTGTTAATGAATAATT GCCATTAACTTCACTGATAGATTTTGTAATCCTTTGGCTTGGAGAAAGATTCCCCACTTGAATTTTCAATTTCTTAAACA ATGTAAACAAAATAAATCCAATGGTCAACCTAGAAAGAGAAGAGAAAGGTATAAATAAAAAACTCAACTGCTTTATGCAT TTAGAGTATTAATAACAAAGATACCAAGAAAGCCCTAATTTGTTTAATACTACGGTGTTACATTCTACAGATTATAAGTG AAATGACTTAGGCCAAACCAAATCACAAGTAAATGAATTAAATTTTTACTAGTGAGTGTGAGTCAGCTATATCTTTTGAT GCCTAACTTGAGTCTACGTGATTTTCCCTATTTTAACATTGCCTTGTGATCTTGTATTTGCATTACTCTAGAGCGCCCAG AACATCAAAAGCCCCTTGATTGGCCATCAAGGAAACAGATAGCTTTGGGATCAGCGCGGGGTCTTTCATATTTGCATGAG CATTGTGACCCAAAGATTATTCATCGTGATGTGAAAGCTGCGAACATATTGTTGGATGAGGAGTTTGAGGCTGTTGTTGG GGACTTTGGGTTGGCCAGGCTAATGGACTACAAGGACACCCATGTGACAACTGCTGTGCGGGGCACAATTGGGCACATAG CTCCAGAGTACCTATCTACTGGTAAATCTTCAGAGAAAACAGATGTCTTTGGGTATGGTATAATGCTTCTGGAGCTGATC ACTGGACAAAGAGCGTTTGACCTAGCTCGGCTTGCAAATGATGATGATGTTATGTTGCTTGACTGGGTATGTTGACATTG ATTATATTTATATGTTAACTGTTAAATTTCTTGCAACCCACTAACTATTATGGCTTAGGAAGTGTAATTCTACCCATAAA TGTTGAAGGGGATGGAAAATGTTTACTTCTTTGGCTTTTTCCTTTGCCAGCAGTAGCGTTTACTAATTCTGATTTTCCTA TTGTTTTGGAAATGCTTGTCCTTTTTATTGAGAGGGATATGTATGAATAAACCTGCTGGACCGTGCAGGAGTAAACAAGT TCTATCTTAAGCACTTCGTGTGCAGGCTATGAAAATTAGGTTGTCATTAAGGTTAAGAACGTCATCCACTACTGTTATAA GGTCAATAACTTGCTTCCTTCATTTGATTTAGGGAAGAACAGTTAGTTAAGCTGAAGGATATAAGCATACGGTGTTTAAC ATTGACAGTTTTTCATTTGAAGTATGCATTCATAATATGCCATGAAACTGTCACATATTTTAAGCATATTTCTAAGTGAA CTGAAACTGAAATTGTTCCATTTAGTAGAAGGATATATCCCTGGTTACTTTTTTGTTTTGACATGTAAAACGAGGAGAAA GATTTAGGTTGTCATTAAGGTTAAGAACGTCATCCACTACTGTTATAAGGTCAATAACTTGCTTCCTTCATTTGATTTAG GGAAGAACAGTTAGTTAGGCTGAAGGATATAAGCATACGGTGTTTAACATTGACAGTTTTTCATTTGAAGTATGCATTCA TAATATGCCATGAAACTGTCACATATTTTAAGCATATTTCTAAGTGAACTGAAACTGAAATTGTTCCATTTAGTAGAAGG ATATATCCCTGGTTACTTTTTTGTTTTGACATGTAAAACGAGGAGAAAGATTCTTTTCCAAACAGACTCTTCATTATATT CTGTTTGGTATTCATAGTTGAGCATCGTTCGCATGTCTGTGGATGTATTTTTCTGTAGTAGTATTGTCATTTCCAAGTCT TATACATCTGAATATATTCTTTATAGGTAAAAGGACTTCTGAAAGAGAAAAAACTAGAAATGCTGGTTGATCCTGATCTC CACAACAATTACATAGAAGCTGAGGTAGAACAGTTAATCCAGGTTGCACTCCTTTGCACTCAAGGTTCCCCTATGGACCG GCCTAAAATGTCAGAGGTGGTGCGTATGCTTGAAGGTGATGGCTTGGCAGAAAGATGGGATGAGTGGCAAAAGGTGGAAA TTCTCCGCCAGGAGATGGAGCTAGCCCCACATCCCAATTCTGATTGGATAGTTGACTCAACTGAAAATCTTCATGCAGTT GAGTTATCTGGTCCAAGGTAA
CDS sequence (LotjaGi2g1v0096200.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCACTAACTAATATTTCAGCTCTCCAAGTGCTGGATTTGTCTAATAACCGTCTCTCAGGTGTGGTTCCTGATAATGG CTCCTTCTCATTATTCACTCCTATCAGTTTTACCAATAACTTGGATCTATGTGGCCCTGTCACTGGGCACCCTTGTCCTG GATCTCCTCCATTTTCTCCTCCTCCCCCATTTGTCCCACCGCCCCCTATCTCAACTCCAGGAGGTAGTGGTGCCACTGGT GCAATAGCGGGAGGAGTAGCTGCAGGTGCTGCTCTATTATTTGCTGTTCCTGCAATTGCGTTTGCATGGTGGCGTCGAAG GAAACCACAAGAATTTTTCTTTGATGTGCCTGGTGAAGAGGATCCGGAAGTACATCTTGGGCAGCTTAAGAGATTCTCGC TACGAGAACTACAAGTTGCAACAGATACTTTCAGCAATAAGAACATTCTTGGAAGGGGAGGATTTGGTAAAGTTTACAAA GGACGCTTGGCAGATGGTACATTGGTTGCTGTGAAAAGATTGAAAGAAGAGCGCACACCTGGTGGGGAGCTTCAGTTTCA GACTGAAGTAGAAATGATCAGCATGGCTGTGCATCGAAATCTCCTCCGTTTACGTGGGTTCTGTATGACGCCGACTGAAA GGCTCCTTGTTTATCCTTACATGGCTAATGGAAGCGTTGCCTCATGCTTAAGAGAGCGCCCAGAACATCAAAAGCCCCTT GATTGGCCATCAAGGAAACAGATAGCTTTGGGATCAGCGCGGGGTCTTTCATATTTGCATGAGCATTGTGACCCAAAGAT TATTCATCGTGATGTGAAAGCTGCGAACATATTGTTGGATGAGGAGTTTGAGGCTGTTGTTGGGGACTTTGGGTTGGCCA GGCTAATGGACTACAAGGACACCCATGTGACAACTGCTGTGCGGGGCACAATTGGGCACATAGCTCCAGAGTACCTATCT ACTGGTAAATCTTCAGAGAAAACAGATGTCTTTGGGTATGGTATAATGCTTCTGGAGCTGATCACTGGACAAAGAGCGTT TGACCTAGCTCGGCTTGCAAATGATGATGATGTTATGTTGCTTGACTGGGTAAAAGGACTTCTGAAAGAGAAAAAACTAG AAATGCTGGTTGATCCTGATCTCCACAACAATTACATAGAAGCTGAGGTAGAACAGTTAATCCAGGTTGCACTCCTTTGC ACTCAAGGTTCCCCTATGGACCGGCCTAAAATGTCAGAGGTGGTGCGTATGCTTGAAGGTGATGGCTTGGCAGAAAGATG GGATGAGTGGCAAAAGGTGGAAATTCTCCGCCAGGAGATGGAGCTAGCCCCACATCCCAATTCTGATTGGATAGTTGACT CAACTGAAAATCTTCATGCAGTTGAGTTATCTGGTCCAAGGTAA
Protein sequence (LotjaGi2g1v0096200.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPLTNISALQVLDLSNNRLSGVVPDNGSFSLFTPISFTNNLDLCGPVTGHPCPGSPPFSPPPPFVPPPPISTPGGSGATG AIAGGVAAGAALLFAVPAIAFAWWRRRKPQEFFFDVPGEEDPEVHLGQLKRFSLRELQVATDTFSNKNILGRGGFGKVYK GRLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPEHQKPL DWPSRKQIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLARLMDYKDTHVTTAVRGTIGHIAPEYLS TGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLHNNYIEAEVEQLIQVALLC TQGSPMDRPKMSEVVRMLEGDGLAERWDEWQKVEILRQEMELAPHPNSDWIVDSTENLHAVELSGPR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 57 | 57 | 3.1E-10 | ||
| Phobius | 1 | 80 | 80 | - | – | |
| PANTHER | 3 | 452 | 450 | 2.0E-197 | ||
| PANTHER | 3 | 452 | 450 | 2.0E-197 | – | |
| Phobius | 81 | 104 | 24 | - | – | |
| TMHMM | 82 | 104 | 23 | - | – | |
| Phobius | 105 | 467 | 363 | - | – | |
| Gene3D | 113 | 220 | 108 | 1.9E-38 | – | |
| SUPERFAMILY | 122 | 419 | 298 | 1.09E-78 | ||
| ProSiteProfiles | 144 | 431 | 288 | 36.414 | ||
| SMART | 144 | 418 | 275 | 1.6E-32 | ||
| Pfam | 145 | 416 | 272 | 2.7E-45 | ||
| ProSitePatterns | 150 | 172 | 23 | - | ||
| Gene3D | 221 | 438 | 218 | 1.4E-68 | – | |
| ProSitePatterns | 267 | 279 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Transmembrane receptor protein serine/threonine kinase activity | Combining with a signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: ATP protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate. | ||
| Molecular function | Signaling receptor binding | Interacting selectively and non-covalently with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi2g1v0096200.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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