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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR031112
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 42 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.033s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0037529.1
n.a. PREDICTED: ethylene-responsive transcription factor RAP2-7-like [Glycine max] gi|356547208|ref|XP_003542008.1| chr0 12055031 12059052 +
2 domain predictions
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Lj0g3v0037529.2
n.a. PREDICTED: ethylene-responsive transcription factor RAP2-7-like [Glycine max] gi|356547208|ref|XP_003542008.1| chr0 12055031 12059052 +
2 domain predictions
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Lj0g3v0070689.1
n.a. PREDICTED: AP2-like ethylene-responsive transcription factor AIL6-like [Vitis vinifera] gi|359497499|ref|XP_003635541.1| chr0 25818081 25819832 +
2 domain predictions
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Lj0g3v0070689.2
n.a. PREDICTED: AP2-like ethylene-responsive transcription factor AIL6-like [Vitis vinifera] gi|359497499|ref|XP_003635541.1| chr0 25818081 25819832 +
2 domain predictions
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Lj0g3v0070699.1
n.a. PREDICTED: AP2-like ethylene-responsive transcription factor PLT2-like [Glycine max] gi|356566177|ref|XP_003551311.1| chr0 25820956 25823853 +
2 domain predictions
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Lj0g3v0092269.1
n.a. PREDICTED: floral homeotic protein APETALA 2-like [Glycine max] gi|356563604|ref|XP_003550051.1| chr0 38363533 38368563 +
2 domain predictions
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Lj0g3v0092269.2
n.a. PREDICTED: floral homeotic protein APETALA 2-like [Glycine max] gi|356563604|ref|XP_003550051.1| chr0 38363533 38367394 +
2 domain predictions
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Lj0g3v0092269.3
n.a. PREDICTED: floral homeotic protein APETALA 2-like [Glycine max] gi|356563604|ref|XP_003550051.1| chr0 38365404 38367394 +
2 domain predictions
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Lj0g3v0119889.1
n.a. PREDICTED: AP2-like ethylene-responsive transcription factor AIL5-like [Brachypodium distachyon] gi|357119933|ref|XP_003561687.1| chr0 53187762 53190380 +
2 domain predictions
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Lj0g3v0254389.1
n.a. PREDICTED: AP2-like ethylene-responsive transcription factor PLT2-like [Glycine max] gi|356541922|ref|XP_003539421.1| chr0 132080493 132083316 +
2 domain predictions
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Lj0g3v0360969.1
n.a. PREDICTED: LOW QUALITY PROTEIN: AP2-like ethylene-responsive transcription factor ANT-like [Glycine max] gi|356577698|ref|XP_003556961.1| chr0 190151459 190156713 +
2 domain predictions
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Lj1g3v1768990.1
n.a. PREDICTED: AP2-like ethylene-responsive transcription factor ANT-like [Glycine max] gi|356509795|ref|XP_003523631.1| chr1 20559880 20564207 -
2 domain predictions
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Lj1g3v2841300.1
n.a. PREDICTED: AP2-like ethylene-responsive transcription factor BBM2-like [Glycine max] gi|356568527|ref|XP_003552462.1| chr1 32376328 32377583 -
2 domain predictions
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Lj1g3v2841310.1
n.a. babyboom 1 [Glycine max] gi|351725631|ref|NP_001237099.1| chr1 32377762 32381188 -
2 domain predictions
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Lj1g3v2952280.1
n.a. PREDICTED: ethylene-responsive transcription factor WRI1-like [Glycine max] gi|356529949|ref|XP_003533548.1| chr1 33458580 33460718 -
2 domain predictions
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Lj1g3v2952290.1
n.a. AP2-like ethylene-responsive transcription factor [Medicago truncatula] gi|357501657|ref|XP_003621117.1| chr1 33460779 33461346 -
2 domain predictions
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Lj1g3v3560250.1
n.a. PREDICTED: ethylene-responsive transcription factor-like protein At4g13040-like [Glycine max] gi|356567816|ref|XP_003552111.1| chr1 40953910 40959923 -
2 domain predictions
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Lj1g3v3560250.2
n.a. PREDICTED: ethylene-responsive transcription factor-like protein At4g13040-like [Glycine max] gi|356567816|ref|XP_003552111.1| chr1 40953910 40959923 -
2 domain predictions
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Lj1g3v4241090.1
n.a. PREDICTED: AP2-like ethylene-responsive transcription factor At2g41710-like isoform X1 [Cicer arietinum] gi|502108710|ref|XP_004493481.1| chr1 50100411 50104276 -
2 domain predictions
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Lj1g3v4578960.1
n.a. PREDICTED: ethylene-responsive transcription factor RAP2-7-like [Cicer arietinum] gi|502111031|ref|XP_004493938.1| chr1 54394393 54396920 +
2 domain predictions
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Lj1g3v4578960.2
n.a. Transcription factor [Medicago truncatula] gi|357510563|ref|XP_003625570.1| chr1 54394393 54396920 +
2 domain predictions
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Lj2g3v1338880.1
n.a. PREDICTED: AP2-like ethylene-responsive transcription factor ANT-like [Glycine max] gi|356570045|ref|XP_003553203.1| chr2 21034957 21036437 -
2 domain predictions
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Lj2g3v1338890.1
n.a. PREDICTED: AP2-like ethylene-responsive transcription factor At1g16060-like [Glycine max] gi|356524132|ref|XP_003530686.1| chr2 21036681 21037452 -
2 domain predictions
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Lj2g3v1455120.1
n.a. PREDICTED: AP2-like ethylene-responsive transcription factor AIL6-like isoform X2 [Cicer arietinum] gi|502154646|ref|XP_004509771.1| chr2 22967911 22971944 +
2 domain predictions
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Lj2g3v1891000.1
n.a. PREDICTED: floral homeotic protein APETALA 2-like [Glycine max] gi|356496919|ref|XP_003517312.1| chr2 28137356 28140243 -
2 domain predictions
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Lj3g3v0719980.1
n.a. PREDICTED: ethylene-responsive transcription factor-like protein At4g13040-like [Cicer arietinum] gi|502155948|ref|XP_004510251.1| chr3 8099854 8105031 +
2 domain predictions
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Lj3g3v1778650.1
n.a. PREDICTED: AP2-like ethylene-responsive transcription factor PLT2-like [Glycine max] gi|356541922|ref|XP_003539421.1| chr3 22562002 22564825 +
2 domain predictions
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Lj3g3v2060630.1
n.a. PREDICTED: AP2-like ethylene-responsive transcription factor At1g16060-like [Cicer arietinum] gi|502148088|ref|XP_004507033.1| chr3 26520278 26523230 -
2 domain predictions
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Lj3g3v2060630.2
n.a. PREDICTED: AP2-like ethylene-responsive transcription factor At1g16060-like [Cicer arietinum] gi|502148088|ref|XP_004507033.1| chr3 26520278 26524367 -
2 domain predictions
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Lj3g3v2060630.3
n.a. AP2 domain-containing transcription factor [Populus trichocarpa] gi|224072757|ref|XP_002303866.1| chr3 26523511 26525179 -
2 domain predictions
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Lj3g3v2612440.1
n.a. AP2-like ethylene-responsive transcription factor ANT [Medicago truncatula] gi|357513955|ref|XP_003627266.1| chr3 32163063 32165456 -
2 domain predictions
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Lj3g3v2612450.1
n.a. PREDICTED: AP2-like ethylene-responsive transcription factor AIL1-like [Glycine max] gi|356560162|ref|XP_003548364.1| chr3 32165824 32167212 -
2 domain predictions
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Lj3g3v3107620.1
n.a. PREDICTED: ethylene-responsive transcription factor RAP2-7-like [Cicer arietinum] gi|502145380|ref|XP_004506004.1| chr3 38925093 38928773 -
2 domain predictions
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Lj3g3v3107620.2
n.a. PREDICTED: ethylene-responsive transcription factor RAP2-7-like [Cicer arietinum] gi|502145380|ref|XP_004506004.1| chr3 38925093 38928773 -
2 domain predictions
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Lj3g3v3107620.3
n.a. PREDICTED: ethylene-responsive transcription factor RAP2-7-like [Glycine max] gi|356544634|ref|XP_003540753.1| chr3 38925093 38928773 -
2 domain predictions
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Lj3g3v3107620.4
n.a. PREDICTED: ethylene-responsive transcription factor RAP2-7-like [Glycine max] gi|356547208|ref|XP_003542008.1| chr3 38925093 38927047 -
2 domain predictions
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Lj3g3v3245260.1
n.a. PREDICTED: AP2-like ethylene-responsive transcription factor PLT2-like [Glycine max] gi|356541922|ref|XP_003539421.1| chr3 40051012 40054555 -
2 domain predictions
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Lj4g3v0708640.1
n.a. PREDICTED: AP2-like ethylene-responsive transcription factor ANT-like [Glycine max] gi|356514362|ref|XP_003525875.1| chr4 11679747 11683614 -
2 domain predictions
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Lj4g3v2120320.1
n.a. n.a. chr4 28949861 28958713 -
2 domain predictions
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Lj4g3v2120330.1
n.a. PREDICTED: AP2-like ethylene-responsive transcription factor AIL5-like [Glycine max] gi|356546106|ref|XP_003541472.1| chr4 28951628 28958604 +
2 domain predictions
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Lj4g3v2120330.2
n.a. PREDICTED: AP2-like ethylene-responsive transcription factor AIL5-like [Glycine max] gi|356546106|ref|XP_003541472.1| chr4 28956399 28958604 +
2 domain predictions
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Lj6g3v1048880.1
n.a. PREDICTED: AP2-like ethylene-responsive transcription factor At1g16060-like [Glycine max] gi|356514511|ref|XP_003525949.1| chr6 11804844 11807696 +
2 domain predictions
 –