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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR032838
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 10 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.379s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0197519.1
n.a. Inter-alpha-trypsin inhibitor heavy chain H3 [Medicago truncatula] gi|357472157|ref|XP_003606363.1| chr0 96310172 96311199 -
2 domain predictions
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Lj0g3v0266539.1
n.a. Inter-alpha-trypsin inhibitor heavy chain H3 [Medicago truncatula] gi|357443207|ref|XP_003591881.1| chr0 138046884 138048764 -
2 domain predictions
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Lj0g3v0288799.1
n.a. Inter-alpha-trypsin inhibitor heavy chain H3 [Medicago truncatula] gi|357443207|ref|XP_003591881.1| chr0 150062779 150066991 +
2 domain predictions
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Lj1g3v4047310.1
n.a. Inter-alpha-trypsin inhibitor heavy chain H3 [Medicago truncatula] gi|357472157|ref|XP_003606363.1| chr1 47786038 47791459 -
2 domain predictions
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Lj5g3v1811590.1
n.a. Inter-alpha-trypsin inhibitor heavy chain H3 [Medicago truncatula] gi|357443207|ref|XP_003591881.1| chr5 25902463 25904391 +
2 domain predictions
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LotjaGi3g1v0165000.1
n.a. Zinc finger, C3HC4 type (RING finger) protein; TAIR: AT5G60710.1 Zinc finger (C3HC4-type RING finger) family protein; Swiss-Prot: sp|Q55874|Y103_SYNY3 Uncharacterized protein sll0103; TrEMBL-Plants: tr|A0A0B2PPB7|A0A0B2PPB7_GLYSO Uncharacterized protein; Found in the gene: LotjaGi3g1v0165000 LjG1.1_chr3 22458906 22463890 -
2 domain predictions
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LotjaGi3g1v0165000.2
n.a. Zinc finger, C3HC4 type (RING finger) protein; TAIR: AT5G60710.1 Zinc finger (C3HC4-type RING finger) family protein; Swiss-Prot: sp|Q55874|Y103_SYNY3 Uncharacterized protein sll0103; TrEMBL-Plants: tr|A0A0B2PPB7|A0A0B2PPB7_GLYSO Uncharacterized protein; Found in the gene: LotjaGi3g1v0165000 LjG1.1_chr3 22459088 22463865 -
2 domain predictions
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LotjaGi3g1v0489100.1
n.a. Zinc finger, C3HC4 type (RING finger) protein; TAIR: AT5G60710.1 Zinc finger (C3HC4-type RING finger) family protein; Swiss-Prot: sp|Q55874|Y103_SYNY3 Uncharacterized protein sll0103; TrEMBL-Plants: tr|A0A0S3SCP0|A0A0S3SCP0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0489100 LjG1.1_chr3 90701222 90707799 +
2 domain predictions
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LotjaGi5g1v0273400.1
n.a. Zinc finger, C3HC4 type (RING finger) protein; TAIR: AT2G38970.1 Zinc finger (C3HC4-type RING finger) family protein; Swiss-Prot: sp|Q55874|Y103_SYNY3 Uncharacterized protein sll0103; TrEMBL-Plants: tr|G7I519|G7I519_MEDTR Zinc finger, C3HC4 type (RING finger) protein; Found in the gene: LotjaGi5g1v0273400 LjG1.1_chr5 58690175 58695738 +
2 domain predictions
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LotjaGi5g1v0273400.2
n.a. Zinc finger, C3HC4 type (RING finger) protein; TAIR: AT2G38970.1 Zinc finger (C3HC4-type RING finger) family protein; Swiss-Prot: sp|Q55874|Y103_SYNY3 Uncharacterized protein sll0103; TrEMBL-Plants: tr|A0A072VZM6|A0A072VZM6_MEDTR Zinc finger, C3HC4 type (RING finger) protein; Found in the gene: LotjaGi5g1v0273400 LjG1.1_chr5 58690742 58694184 +
2 domain predictions
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