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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0259100 |
| Transcript ID | LotjaGi4g1v0259100.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Uridine kinase; TAIR: AT1G73980.1 Phosphoribulokinase / Uridine kinase family; Swiss-Prot: sp|Q54R62|UCKC_DICDI Uridine-cytidine kinase C; TrEMBL-Plants: tr|A0A0R0JPT3|A0A0R0JPT3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0259100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:61459762..61465967) extracted from Lotus japonicus Gifu genome v1.2.
TTTCCCCAATGGCCCCTGATACTGTTCCTGGTGTTGAATCACCTCGGCGACGTTATGGTCTATTACGAGATCAAGTTCAA CCAGTGAAAAGAAAGGACTCTGATCGCTATGAAATTGTTCCAATTCAAGATTCTCTGTCTTTTGAGAAAGGATTTTTCAT AGTTATTCGTGCTTGCCAGTTGCTGGCTCAAAAGAATGATGGAATTATATTAGTAGGAGTTGCAGGCCCCTCTGGAGCAG GGAAAACTGTTTTCACTGAGAAGATTCTCAATTTTATGCCAAGCATAGCTGTCATAACAATGGACAATTATAACGATGCT AGTCGAATCATAGATGGCAACTTCGATGGTAAGTTTTGTTTTCACCTATTGCTTTTCATAATCTATAAGGACTGCACACA TCTAGTTTCCTTGTTTCATTTAGGGCTTTACTAAGTTGTCTTGATTTAGTATCTAATCTTATTTTACTCTCTTCATTTAT AAGAAGTACTTCTACTTATCTATCATTTTGATCAATAATCTAGAAATAGGAAGATATATTATTCAACCCTGAGATCTAAT GTCATTGTTATTTGAAACAGACCCCCGGTTGACGGATTATGATACCTTGCTAGAAAATATACAGGGTCTTAAAGCAGGGA AGTCTGTCCAGGTTCCAATATATGATTTCAAGTCTAGTTCTCGCATAGGTTACAGGTGGTGTACATTACAATTATTCATT TCTAGAATACACAAAAGTATGTTTTATAGCTGTTCCATCTAGGTTTGCACTCACAAAATAGGTAATCCTGAAAATGAGAA TACAAACGCTAATAATACATAACCTTGACTCGTATTGACCAAGTTAATATATTTGAAATGCTTTTCGTGTGGAAGTGGAA AATCCGAGAAATTTCTGATTATATGGAATTTATGGTTGTGTTTTGGATTATCTATCGAGCAAAAGATTATTTAAAAATCA ATTATGATAAAATCATTTTTATGTTTGGGAGTCCAAACTGAAAAGTGATTTTAAGGTATTTTTTGTTTGTGCTGTTTAAG GAAAATCACTCCTACATTGTAACTTACTAAGGATATAAGATGATTTGTTTAGTAATATAAAACCCATGCTTTAGTTGCGT GATGGGGTGAATTTAGTAAGGATGGTTAGAGGTGCAATGCAAAGAGAAATTATTATGAGCAAAAGGCTCATAAGATAACA TTTCTTTAAAGTGATTTTTCAGTTTAGATGAAACGAAATAGATGGTGATTATAACCAGTTTCACTTACTTATATCCAAAT ACGTTAATTTACCAAAAACAGATTTTTATAAAAGAAAAAAAAGTTGTTTTTGTTATGGGAAATAATTACCAAACATCCAT CTAATAGTTTATAAACATTTCTATAGTATCATGCATTCATGCTGCATTATTGCTCTCTCCCTGTCTTTAACTCCTTAGCT TGTATATATGTTCACGTATTTCTCCACTCACCTGCCAATACCCGCAATCTCACATGAATGTCTATTGTGTAGATAGAGGA GATGCATCATAGAATGTGTAAATTTGGATAGACAGGAGCACACATAAATAGAATCATGTTATTCCTAACCAGGATTTATT TCAGTTGTACTTATTTTGTTCCATTTTCCTTACAGGACTGTTGAAGTCCCTAGCTCCCGTATTGTAATTGTTGAAGGCAT ATATGCCTTAGGTGAAAAATTAAGGCCTTTGCTTGATCTTCGTGTTTCTGTCACTGGTGGAGTTCATTTTGACCTCGTCA AGCGCGTTTTGCGGGACATTCAACGTGCTGGTCAAGAGCCTGAAGAAATAATTCATCAAATCTCTGAAACGGTTTTTCAC TGATCCCATGTTAGAATTTCTTTTAGGAGTTCTGGAAACATGAATCTGTCAGACAAAGTCATCTGCCATAAATTTACCTA TTATTTTGCTTCCTTTTATAGGTATATCCCATGTATAAAGCTTTTATAGAGCCAGATCTCCAAACAGCACATATAAAAAT TATTAACAAGTTTAATCCATTCTCTGGTTTCCAGAATCCCAGCTACATATTGAAGGTGATATATACTATATTTTCATAGT AAGGTTCTTAGTATTTTCAAATGTCTTCTTGACGATACTTTATGTTGATTTTTTCTATGGTTTTAGTCAGCTAGGGCTGT TACAGTAGATCAAATCAAGGCAGTTATTGCCGCAGAGCATACTGAGACAAAAGAGGAAACATACGACATATATCTTCTAC CCCCTGGGGAAGACCCTGAAGCATGTCAATCATATTTAAGGATGAGAAACCGTGATGGCAAGTACAATCTAATGTTTGAG GTTAGGTTATTGTAAACATAACCTTTCATGTTGTTAGTTACATTATTATTTAAAAGAATGTCTAGCAATGTATAAATTTT GTCTGCATTGGTAGTGTGCATTTATTTTATGCCATTGCTTCACTGGTAATATTGTTCTTGACCTTGTGCTTTGAGATAAT TGTCCCTTTTTTTGATCAAACAGTTTGGTACTTGCTATATTTTAATTTCCCCCCAAGGTTTTTAAATCCGTGTTTTCTTA GTTAAAAGTTCCTAAAAAGTCTGCTGTAAGGATAAAGAAGCCTAAAAGCTCCTGCCTCTTGTATCGCCATAGCTACATCC TGGAGTTGTGACATTCAATGAGAATAAACTTTGGGGAAGAAAAAATCACCTCTGATACTTTTTCGGAAGTTGCAACTTGC AAACAGTTTTTTTGTCCATTCTTACCACAGCTTTTTTGCTTGGCAAATTGAATCATCATAGTTCATGACTTTATGAAATA TCTACTCTACTTGTTCTTCTTTTAAAGCCTGTGTTTCACAATGGAGGATATCGCAGGTTACATACTCACGCTTTGCAGAT TTTATCTTTTGATATCCTACCTTCATGAGTGAGATTTGCTAAAATGTTTTCATTTAGCTGCAAATTTACTTAAAAAACCT CTATTGCTTTGTTGTTTTCAGGAATGGGTTACAGATAGTCCATTCATAATATCCCCTAGAATTACTTTTGAGGTCAGCGT GCGCCTGCTTGGAGGGTTGATGGCCTTGGGGTACACAATTGCAGCTATCCTGAAAAGAAGCAGCCATGTCTTTCATGATG ATAAAGTGTCCATAAAAACTGATTGGCTAGAACAACTTAATCGTTTATATGTTCAGGTATACCGGCATATCATTCATACC TTTCCCCTTTTTTCTTTTTTCTATTCTTGTTGAAACCTGCATGCTGCATTTTATGATTGTGGAAACGCCTCTACATTTAT AAGGATTAAGTTTACTTACATTTGACCCTCGACCAAGCCCCACAATAGAAAGAGCATTGAGCATCCGATGGTCTTTATTT CTTATTGTTTCTTAACCCTCGCTATGATAATTCACACCTGACACCTTACTAATTTCTTCTTTGCCGACTTTATTACACAT GGTAAGAACATTTCAGGATTAGTGGCCACTCAGTTTTCACTTTTTTTTTATTGACTTCCACTGTGCCTGTCATATGCCTT TGATGGGTAGATGTGGTTAGGCAATCAATTACTATGTATTTATGTGCTAAGTTTCAAATAATTGGTGCTTTTGAAATACA TGTGGAAGGACTGAATGCCAGTCAAACATATTTGTTTAGTTCACCAAAGAAAGTTAGGTATCATATTACTTGGACAATAT CTCATTCTAAACAATATTGATATATTACTTTTTTTAAGTTGAATCTATTTACAACATCAATTGTCATTTATGTCTCCTTT ATTAGTTTCTGTGGTTCATTCGTAGTTTTTTTTTTGAGTTACCATGTTGTGAAGGTTTTAAAACATTCCCTTTTGTCCTG GGTTTTGTTAATTCATGTGTCTTTCTTGTTTCCTCAATGAAAATGCATTGACTATTTTAAAGCCGTTTTCCTTTCAGTAT GAAAAATCATTCTCCACATTAAGATTAATAACAGTTGGGGTCTTTTGTTATGTTAAAATGAGCAGGTGGGTTTGTTTGAA GTTCTTGTGTGGTTCATTGTTGTCTATTTGCTAATATTTTTCATCTATCCATATTTTTTCTTTTCTTGTGCGTGTTTCTG TTAATGTCTCTCTGGTTGATATTCTGTAAGAATGGCCATGGGATAGGCTTTAACATTATATTAACACTACAGTGCTAGCT TAGCCTATATCTACTCCTATTTGTGTGTGTAATATAGCCCAATCTTGGCCACAATTCAGCCCATTTAGATGAATACATGA ATAAATGTGTGGTTATGTACTCTAAACCCTAAAAAAAATCTATACATATGGGGATGGATGGATCGTATTGGCCCTGATTT TGAGAACTCTAGCTCAGATATATTCCTGTTTGTAAAAATTGGCCTAGCAGAATGGACTTTTTGCAGACCTTGGGTACTTA TTTTAACCCAAGCACTTAAAATTTTGGGTTGCTCAGGCCAAATGCCCATCCCTATTCTCTGTGTGTATTTGTTTCTTTTG TTGTCAGGACTCAGGAACTAAATACTTGTTCATGCTGTTTTGAAGGTGCAAGGGAAGGATAGAAACTATGTTAAATTTGT GGCAGAGAAACTGGGGTTGGATGGTTCATATGTTCCACGCACGTACATTGAACAAATTCAGCTGGAAAAGCTTGTAAATG ATGTGATGGTATGAATCACTATACCACCTTCTGCTTGTGCGCTTTGCATACTCTACCTCGAATCACTGATCTGGTCAAAC TTCAGGCACTGCCAGCTGATCTAAAGACAAAGTTCAACATAGATGATGAGATGGTTTCAAGCCCCAAAGAAGCCCTTTCC AGAGCTTCTGCAGATAGGAGAACGAAGTACCTTAATCGGTACTTACTAATTTTCATGACTGATTTAACTTGCCTTGTAAA CAATATTGATGTCTTCTAAACTTACTCTCCATTTTGGGAAAATAATTTCTAAACCTGAATCTGATTGTAAATAAGTTTGA GAAAGCGCCTCATGATGTTCTCCTGATGTTGGTCTTCTGCAGTGGTATTTCACAATCATTTTCAAATCGAAGGGACAAGA TTCTGCCTAATTTGACTAAACTTGCTATAAATAACACACGATTTGATGGGAGAGCTCTAGACTCACCTGCACCGATTGCT AACCAAGTAAGATATTTTCCTCAAGTTGTGATAGAAAATGACTATCATTTTGGCCATTTCATTTGTCAATGTATCACCTG TTGTATCTTAATTTATGGAACTCATAAAAGCTACCTGCTGAGTCTGTATGTAGAAATGTTAAAAAGGGGATATGAAGTTA TACTGCATAAGGGGAAGAAACTTTAGACAAGATGGTAGCAAGTTTATAAACTTCAGTGGAAAATAGCTATCTGCCTTTCG GACTAGGAGGTTTAATTTTTAGTTTATTTTTTGTCTAAATGATTCATTCACTGATATTTGCTCTTGAGCTGCCAGGGAGT TATCACTCAGCTTTCTGATCAAATTTCTACATTGAATGAAAGAATGGATGAGTTCACCTCCCGTATTGAAGAGCTGAATT CAAAGTTTGCTATCAGCAAAGTCTCAGCCAGTCAACAAAACTTGGCTTTACAGGCTGAGGTCTGCAATGGCTCTGGCCCC ACTTCTCTCTTTGTATCTGGATTAGGAAATGGTTCATTGGCTGGACCATTGCTACCTAATTCTTCATCATGCTCTCAACT GGCTAGAGAGTCTCCCCTGATGGAAGAGGTAGGTGATATATCCCCTCCTCATTTCGAACTTACATGACAGAAGTTCTGGT CTAAATACATATATGCAAACTGTATATCCTGTTATGCCTGCTGCTGTGCATTATATGACTTCATTTGAGATAGGCATTAT ATTAGGGAACTCATTTACTTTACTTATATAAAAACTTCTAAATAAAAAGTACAAGCATTTATTTCTTGAGAATCCAAAAA GGTATTTCTTGCATTTCGTCTGGATGGTTCATAATAAATAGCATTACTCATTATTTTTTACTCAAAATAGGTATTACTTG TTGCTCGAGGGCAACGTCAACTCATACATCAACTAGACACTCTGAGCAATCTTTTGCATGAATACTTTGGAGAAAGGTCA CGGCAGGACAGAACAGAGCAGAGACGAATGGGTGAAATTGAATCCATTGCCATCCCTGTGGTTTTGACTCTGGCCATTGG TGCTGTTGGTGTGTTCTTGTTTAAGGGTTTGTCATCTTAAAAATAA
CDS sequence (LotjaGi4g1v0259100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCCCTGATACTGTTCCTGGTGTTGAATCACCTCGGCGACGTTATGGTCTATTACGAGATCAAGTTCAACCAGTGAA AAGAAAGGACTCTGATCGCTATGAAATTGTTCCAATTCAAGATTCTCTGTCTTTTGAGAAAGGATTTTTCATAGTTATTC GTGCTTGCCAGTTGCTGGCTCAAAAGAATGATGGAATTATATTAGTAGGAGTTGCAGGCCCCTCTGGAGCAGGGAAAACT GTTTTCACTGAGAAGATTCTCAATTTTATGCCAAGCATAGCTGTCATAACAATGGACAATTATAACGATGCTAGTCGAAT CATAGATGGCAACTTCGATGACCCCCGGTTGACGGATTATGATACCTTGCTAGAAAATATACAGGGTCTTAAAGCAGGGA AGTCTGTCCAGGTTCCAATATATGATTTCAAGTCTAGTTCTCGCATAGGTTACAGGACTGTTGAAGTCCCTAGCTCCCGT ATTGTAATTGTTGAAGGCATATATGCCTTAGGTGAAAAATTAAGGCCTTTGCTTGATCTTCGTGTTTCTGTCACTGGTGG AGTTCATTTTGACCTCGTCAAGCGCGTTTTGCGGGACATTCAACGTGCTGGTCAAGAGCCTGAAGAAATAATTCATCAAA TCTCTGAAACGGTATATCCCATGTATAAAGCTTTTATAGAGCCAGATCTCCAAACAGCACATATAAAAATTATTAACAAG TTTAATCCATTCTCTGGTTTCCAGAATCCCAGCTACATATTGAAGTCAGCTAGGGCTGTTACAGTAGATCAAATCAAGGC AGTTATTGCCGCAGAGCATACTGAGACAAAAGAGGAAACATACGACATATATCTTCTACCCCCTGGGGAAGACCCTGAAG CATGTCAATCATATTTAAGGATGAGAAACCGTGATGGCAAGTACAATCTAATGTTTGAGGAATGGGTTACAGATAGTCCA TTCATAATATCCCCTAGAATTACTTTTGAGGTCAGCGTGCGCCTGCTTGGAGGGTTGATGGCCTTGGGGTACACAATTGC AGCTATCCTGAAAAGAAGCAGCCATGTCTTTCATGATGATAAAGTGTCCATAAAAACTGATTGGCTAGAACAACTTAATC GTTTATATGTTCAGGTGCAAGGGAAGGATAGAAACTATGTTAAATTTGTGGCAGAGAAACTGGGGTTGGATGGTTCATAT GTTCCACGCACGTACATTGAACAAATTCAGCTGGAAAAGCTTGTAAATGATGTGATGGCACTGCCAGCTGATCTAAAGAC AAAGTTCAACATAGATGATGAGATGGTTTCAAGCCCCAAAGAAGCCCTTTCCAGAGCTTCTGCAGATAGGAGAACGAAGT ACCTTAATCGTGGTATTTCACAATCATTTTCAAATCGAAGGGACAAGATTCTGCCTAATTTGACTAAACTTGCTATAAAT AACACACGATTTGATGGGAGAGCTCTAGACTCACCTGCACCGATTGCTAACCAAGGAGTTATCACTCAGCTTTCTGATCA AATTTCTACATTGAATGAAAGAATGGATGAGTTCACCTCCCGTATTGAAGAGCTGAATTCAAAGTTTGCTATCAGCAAAG TCTCAGCCAGTCAACAAAACTTGGCTTTACAGGCTGAGGTCTGCAATGGCTCTGGCCCCACTTCTCTCTTTGTATCTGGA TTAGGAAATGGTTCATTGGCTGGACCATTGCTACCTAATTCTTCATCATGCTCTCAACTGGCTAGAGAGTCTCCCCTGAT GGAAGAGGTATTACTTGTTGCTCGAGGGCAACGTCAACTCATACATCAACTAGACACTCTGAGCAATCTTTTGCATGAAT ACTTTGGAGAAAGGTCACGGCAGGACAGAACAGAGCAGAGACGAATGGGTGAAATTGAATCCATTGCCATCCCTGTGGTT TTGACTCTGGCCATTGGTGCTGTTGGTGTGTTCTTGTTTAAGGGTTTGTCATCTTAA
Protein sequence (LotjaGi4g1v0259100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAPDTVPGVESPRRRYGLLRDQVQPVKRKDSDRYEIVPIQDSLSFEKGFFIVIRACQLLAQKNDGIILVGVAGPSGAGKT VFTEKILNFMPSIAVITMDNYNDASRIIDGNFDDPRLTDYDTLLENIQGLKAGKSVQVPIYDFKSSSRIGYRTVEVPSSR IVIVEGIYALGEKLRPLLDLRVSVTGGVHFDLVKRVLRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINK FNPFSGFQNPSYILKSARAVTVDQIKAVIAAEHTETKEETYDIYLLPPGEDPEACQSYLRMRNRDGKYNLMFEEWVTDSP FIISPRITFEVSVRLLGGLMALGYTIAAILKRSSHVFHDDKVSIKTDWLEQLNRLYVQVQGKDRNYVKFVAEKLGLDGSY VPRTYIEQIQLEKLVNDVMALPADLKTKFNIDDEMVSSPKEALSRASADRRTKYLNRGISQSFSNRRDKILPNLTKLAIN NTRFDGRALDSPAPIANQGVITQLSDQISTLNERMDEFTSRIEELNSKFAISKVSASQQNLALQAEVCNGSGPTSLFVSG LGNGSLAGPLLPNSSSCSQLARESPLMEEVLLVARGQRQLIHQLDTLSNLLHEYFGERSRQDRTEQRRMGEIESIAIPVV LTLAIGAVGVFLFKGLSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 330 | 330 | - | – | |
| PANTHER | 8 | 629 | 622 | 1.1E-300 | – | |
| PANTHER | 8 | 629 | 622 | 1.1E-300 | – | |
| SUPERFAMILY | 34 | 237 | 204 | 1.05E-23 | ||
| PRINTS | 66 | 83 | 18 | 3.3E-11 | – | |
| Gene3D | 67 | 245 | 179 | 1.7E-37 | – | |
| CDD | 68 | 240 | 173 | 5.51567E-68 | – | |
| Pfam | 69 | 237 | 169 | 6.1E-24 | ||
| PRINTS | 133 | 148 | 16 | 3.3E-11 | – | |
| PRINTS | 189 | 199 | 11 | 3.3E-11 | – | |
| PRINTS | 225 | 238 | 14 | 3.3E-11 | – | |
| ProSiteProfiles | 249 | 411 | 163 | 15.186 | ||
| SUPERFAMILY | 261 | 408 | 148 | 2.75E-16 | ||
| Pfam | 273 | 405 | 133 | 2.8E-19 | ||
| Phobius | 331 | 350 | 20 | - | – | |
| Phobius | 351 | 634 | 284 | - | – | |
| Coils | 501 | 528 | 28 | - | – | |
| TMHMM | 635 | 657 | 23 | - | – | |
| Phobius | 635 | 653 | 19 | - | – | |
| Phobius | 654 | 658 | 5 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Molecular function | Kinase activity | Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule. |
Expression pattern of LotjaGi4g1v0259100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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