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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR036877
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 12 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.873s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0028800.1
n.a. Translation factor SUI1; TAIR: AT5G54940.1 Translation initiation factor SUI1 family protein; Swiss-Prot: sp|Q94JV4|SUI12_ARATH Protein translation factor SUI1 homolog 2; TrEMBL-Plants: tr|I3SF96|I3SF96_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0028800 LjG1.1_chr1 3445813 3454899 +
2 domain predictions
2 GO terms
LotjaGi1g1v0028800.2
n.a. Translation factor SUI1; TAIR: AT5G54940.1 Translation initiation factor SUI1 family protein; Swiss-Prot: sp|Q94JV4|SUI12_ARATH Protein translation factor SUI1 homolog 2; TrEMBL-Plants: tr|I3SF96|I3SF96_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0028800 LjG1.1_chr1 3445855 3454899 +
2 domain predictions
2 GO terms
LotjaGi1g1v0028800.3
n.a. Translation factor SUI1; TAIR: AT5G54940.1 Translation initiation factor SUI1 family protein; Swiss-Prot: sp|Q94JV4|SUI12_ARATH Protein translation factor SUI1 homolog 2; TrEMBL-Plants: tr|I3SF96|I3SF96_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0028800 LjG1.1_chr1 3448921 3449259 +
2 domain predictions
2 GO terms
LotjaGi3g1v0055100.1
n.a. Eukaryotic translation initiation factor 2D; TAIR: AT1G71350.1 eukaryotic translation initiation factor SUI1 family protein; Swiss-Prot: sp|P0CL18|EIF2D_RABIT Eukaryotic translation initiation factor 2D; TrEMBL-Plants: tr|I1LVH4|I1LVH4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0055100 LjG1.1_chr3 5739276 5746375 -
2 domain predictions
2 GO terms
LotjaGi3g1v0055100.2
n.a. Eukaryotic translation initiation factor 2D; TAIR: AT1G71350.1 eukaryotic translation initiation factor SUI1 family protein; Swiss-Prot: sp|P0CL18|EIF2D_RABIT Eukaryotic translation initiation factor 2D; TrEMBL-Plants: tr|I1LVH4|I1LVH4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0055100 LjG1.1_chr3 5739980 5745187 -
2 domain predictions
2 GO terms
LotjaGi3g1v0055100.4
n.a. Eukaryotic translation initiation factor 2D; TAIR: AT1G71350.1 eukaryotic translation initiation factor SUI1 family protein; Swiss-Prot: sp|Q5RA63|EIF2D_PONAB Eukaryotic translation initiation factor 2D; TrEMBL-Plants: tr|G7JKR1|G7JKR1_MEDTR Eukaryotic translation initiation factor SUI1-like protein; Found in the gene: LotjaGi3g1v0055100 LjG1.1_chr3 5739980 5745187 -
2 domain predictions
2 GO terms
LotjaGi3g1v0149600.1
n.a. Protein translation factor SUI1-like protein; TAIR: AT5G54760.1 Translation initiation factor SUI1 family protein; Swiss-Prot: sp|A6MZM2|SUI1_ORYSI Protein translation factor SUI1 homolog; TrEMBL-Plants: tr|I3T7H3|I3T7H3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0149600 LjG1.1_chr3 20156319 20160261 -
2 domain predictions
2 GO terms
LotjaGi3g1v0236900.1
n.a. Protein translation factor SUI1; TAIR: AT4G27130.1 Translation initiation factor SUI1 family protein; Swiss-Prot: sp|O48650|SUI1_SALBA Protein translation factor SUI1 homolog; TrEMBL-Plants: tr|I3S4C1|I3S4C1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0236900 LjG1.1_chr3 37960298 37964254 +
2 domain predictions
2 GO terms
LotjaGi3g1v0464100.1
n.a. Protein translation factor SUI1 like; TAIR: AT4G27130.1 Translation initiation factor SUI1 family protein; Swiss-Prot: sp|O48650|SUI1_SALBA Protein translation factor SUI1 homolog; TrEMBL-Plants: tr|A0A151R348|A0A151R348_CAJCA Protein translation factor SUI1 isogeny; Found in the gene: LotjaGi3g1v0464100 LjG1.1_chr3 87955655 87957988 +
2 domain predictions
2 GO terms
LotjaGi3g1v0464100.2
n.a. Protein translation factor SUI1 like; TAIR: AT4G27130.1 Translation initiation factor SUI1 family protein; Swiss-Prot: sp|O48650|SUI1_SALBA Protein translation factor SUI1 homolog; TrEMBL-Plants: tr|A0A151R348|A0A151R348_CAJCA Protein translation factor SUI1 isogeny; Found in the gene: LotjaGi3g1v0464100 LjG1.1_chr3 87956619 87957617 +
2 domain predictions
2 GO terms
LotjaGi6g1v0159400.1
n.a. Translation factor SUI1; TAIR: AT5G54940.1 Translation initiation factor SUI1 family protein; Swiss-Prot: sp|P56330|SUI1_MAIZE Protein translation factor SUI1 homolog; TrEMBL-Plants: tr|V7BN58|V7BN58_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0159400 LjG1.1_chr6 44022255 44022593 +
2 domain predictions
2 GO terms
LotjaGi6g1v0231400.1
n.a. Translation machinery-associated protein 22; TAIR: AT5G11900.1 Translation initiation factor SUI1 family protein; Swiss-Prot: sp|O42929|DENR_SCHPO Translation machinery-associated protein 22; TrEMBL-Plants: tr|I3SCA3|I3SCA3_LOTJA Translation machinery-associated protein 22; Found in the gene: LotjaGi6g1v0231400 LjG1.1_chr6 54010706 54014216 +
2 domain predictions
2 GO terms