Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR038538
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 41 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.931s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0019400.1
n.a. Mitochondrial transcription termination factor family protein; TAIR: AT5G55580.1 Mitochondrial transcription termination factor family protein; Swiss-Prot: sp|Q9FM80|MTEF9_ARATH Transcription termination factor MTERF9, chloroplastic; TrEMBL-Plants: tr|A0A1J7IMX7|A0A1J7IMX7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0019400 LjG1.1_chr1 2418186 2420880 -
2 domain predictions
 –
LotjaGi1g1v0019400.2
n.a. Mitochondrial transcription termination factor family protein; TAIR: AT5G55580.1 Mitochondrial transcription termination factor family protein; Swiss-Prot: sp|Q9FM80|MTEF9_ARATH Transcription termination factor MTERF9, chloroplastic; TrEMBL-Plants: tr|I1M6I9|I1M6I9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0019400 LjG1.1_chr1 2418186 2421947 -
2 domain predictions
 –
LotjaGi1g1v0019400.3
n.a. Mitochondrial transcription termination factor family protein; TAIR: AT5G55580.1 Mitochondrial transcription termination factor family protein; Swiss-Prot: sp|Q9FM80|MTEF9_ARATH Transcription termination factor MTERF9, chloroplastic; TrEMBL-Plants: tr|K7M4D9|K7M4D9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0019400 LjG1.1_chr1 2418452 2421947 -
2 domain predictions
 –
LotjaGi1g1v0023700.1
n.a. Mitochondrial transcription termination factor family protein; TAIR: AT5G07900.1 Mitochondrial transcription termination factor family protein; Swiss-Prot: sp|Q9C6A1|MTEFE_ARATH Transcription termination factor MTERF15, mitochondrial; TrEMBL-Plants: tr|I3SXJ5|I3SXJ5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0023700 LjG1.1_chr1 2856604 2861119 +
2 domain predictions
 –
LotjaGi1g1v0068500.1
n.a. Mitochondrial transcription termination factor family protein, putative; TAIR: AT4G19650.2 Mitochondrial transcription termination factor family protein; Swiss-Prot: sp|Q9M219|MTEFH_ARATH Transcription termination factor MTEF18, mitochondrial; TrEMBL-Plants: tr|I1M7J9|I1M7J9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0068500 LjG1.1_chr1 9458003 9464798 +
2 domain predictions
 –
LotjaGi1g1v0127000.1
n.a. Mitochondrial transcription termination factor family protein; TAIR: AT4G02990.1 Mitochondrial transcription termination factor family protein; Swiss-Prot: sp|Q9ZT96|MTEF4_ARATH Transcription termination factor MTERF4, chloroplastic; TrEMBL-Plants: tr|V7B917|V7B917_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0127000 LjG1.1_chr1 20286394 20290894 +
2 domain predictions
 –
LotjaGi1g1v0127000.2
n.a. Mitochondrial transcription termination factor family protein; TAIR: AT4G02990.1 Mitochondrial transcription termination factor family protein; Swiss-Prot: sp|Q9ZT96|MTEF4_ARATH Transcription termination factor MTERF4, chloroplastic; TrEMBL-Plants: tr|V7B917|V7B917_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0127000 LjG1.1_chr1 20286952 20288508 +
2 domain predictions
 –
LotjaGi1g1v0296200.1
n.a. Mitochondrial transcription termination factor-related family protein; TAIR: AT5G54180.1 plastid transcriptionally active 15; Swiss-Prot: sp|Q9FK23|MTEF8_ARATH Transcription termination factor MTERF8, chloroplastic; TrEMBL-Plants: tr|K7KLT0|K7KLT0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0296200 LjG1.1_chr1 71753811 71756228 +
2 domain predictions
 –
LotjaGi1g1v0375400.1
n.a. Mitochondrial transcription termination factor family protein; TAIR: AT2G03050.1 Mitochondrial transcription termination factor family protein; Swiss-Prot: sp|Q84X53|MTEF1_ARATH Transcription termination factor MTEF1, chloroplastic; TrEMBL-Plants: tr|G7KGN5|G7KGN5_MEDTR Transcription termination factor family protein; Found in the gene: LotjaGi1g1v0375400 LjG1.1_chr1 85383485 85387801 -
2 domain predictions
 –
LotjaGi1g1v0375400.2
n.a. Mitochondrial transcription termination factor family protein; TAIR: AT2G03050.1 Mitochondrial transcription termination factor family protein; Swiss-Prot: sp|Q84X53|MTEF1_ARATH Transcription termination factor MTEF1, chloroplastic; TrEMBL-Plants: tr|G7KGN5|G7KGN5_MEDTR Transcription termination factor family protein; Found in the gene: LotjaGi1g1v0375400 LjG1.1_chr1 85383760 85387801 -
2 domain predictions
 –
LotjaGi1g1v0488700.1
n.a. Mitochondrial transcription termination factor family protein, putative; TAIR: AT3G60400.1 Mitochondrial transcription termination factor family protein; Swiss-Prot: sp|Q9M219|MTEFH_ARATH Transcription termination factor MTEF18, mitochondrial; TrEMBL-Plants: tr|G7KSF7|G7KSF7_MEDTR Transcription termination factor family protein; Found in the gene: LotjaGi1g1v0488700 LjG1.1_chr1 100170718 100175249 -
2 domain predictions
 –
LotjaGi1g1v0725300.1
n.a. Mitochondrial transcription termination factor family protein; TAIR: AT5G06811.1 transcription termination factor family protein; Swiss-Prot: sp|Q9M219|MTEFH_ARATH Transcription termination factor MTEF18, mitochondrial; TrEMBL-Plants: tr|G7KVB8|G7KVB8_MEDTR Transcription termination factor family protein; Found in the gene: LotjaGi1g1v0725300 LjG1.1_chr1 129616047 129628299 -
2 domain predictions
 –
LotjaGi2g1v0086300.1
n.a. Mitochondrial transcription termination factor family protein; TAIR: AT4G14605.1 Mitochondrial transcription termination factor family protein; Swiss-Prot: sp|F4JVI3|MTEF5_ARATH Transcription termination factor MTERF5, chloroplastic; TrEMBL-Plants: tr|A0A0B2SHC2|A0A0B2SHC2_GLYSO Uncharacterized protein; Found in the gene: LotjaGi2g1v0086300 LjG1.1_chr2 24899383 24902697 -
2 domain predictions
 –
LotjaGi2g1v0086300.2
n.a. Mitochondrial transcription termination factor family protein; TAIR: AT4G14605.1 Mitochondrial transcription termination factor family protein; Swiss-Prot: sp|F4JVI3|MTEF5_ARATH Transcription termination factor MTERF5, chloroplastic; TrEMBL-Plants: tr|A0A151RDU0|A0A151RDU0_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0086300 LjG1.1_chr2 24899383 24902697 -
2 domain predictions
 –
LotjaGi2g1v0086300.3
n.a. Mitochondrial transcription termination factor family protein; TAIR: AT4G14605.1 Mitochondrial transcription termination factor family protein; Swiss-Prot: sp|F4JVI3|MTEF5_ARATH Transcription termination factor MTERF5, chloroplastic; TrEMBL-Plants: tr|A0A151RE52|A0A151RE52_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0086300 LjG1.1_chr2 24899424 24902688 -
2 domain predictions
 –
LotjaGi2g1v0086300.4
n.a. Mitochondrial transcription termination factor family protein; TAIR: AT4G14605.1 Mitochondrial transcription termination factor family protein; Swiss-Prot: sp|F4JVI3|MTEF5_ARATH Transcription termination factor MTERF5, chloroplastic; TrEMBL-Plants: tr|A0A0B2SHC2|A0A0B2SHC2_GLYSO Uncharacterized protein; Found in the gene: LotjaGi2g1v0086300 LjG1.1_chr2 24899424 24902688 -
2 domain predictions
 –
LotjaGi2g1v0086300.5
n.a. Mitochondrial transcription termination factor family protein; TAIR: AT4G14605.1 Mitochondrial transcription termination factor family protein; Swiss-Prot: sp|F4JVI3|MTEF5_ARATH Transcription termination factor MTERF5, chloroplastic; TrEMBL-Plants: tr|A0A151RE52|A0A151RE52_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0086300 LjG1.1_chr2 24900025 24901563 -
2 domain predictions
 –
LotjaGi3g1v0000300.1
n.a. Mitochondrial transcription termination factor family protein; TAIR: AT1G78930.1 Mitochondrial transcription termination factor family protein; Swiss-Prot: sp|Q9SZL6|MTEF6_ARATH Transcription termination factor MTERF6, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A072U5S3|A0A072U5S3_MEDTR Transcription termination factor family protein; Found in the gene: LotjaGi3g1v0000300 LjG1.1_chr3 66160 88104 +
2 domain predictions
 –
LotjaGi3g1v0000300.2
n.a. Mitochondrial transcription termination factor family protein; TAIR: AT1G78930.1 Mitochondrial transcription termination factor family protein; Swiss-Prot: sp|Q9SZL6|MTEF6_ARATH Transcription termination factor MTERF6, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A072U5S3|A0A072U5S3_MEDTR Transcription termination factor family protein; Found in the gene: LotjaGi3g1v0000300 LjG1.1_chr3 66196 71118 +
2 domain predictions
 –
LotjaGi3g1v0090200.1
n.a. Mitochondrial transcription termination factor family protein; TAIR: AT1G79220.1 Mitochondrial transcription termination factor family protein; Swiss-Prot: sp|F4JVI3|MTEF5_ARATH Transcription termination factor MTERF5, chloroplastic; TrEMBL-Plants: tr|V7ALR3|V7ALR3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0090200 LjG1.1_chr3 10207629 10209437 +
2 domain predictions
 –
LotjaGi3g1v0136100.1
n.a. Mitochondrial transcription termination factor family protein; TAIR: AT2G36000.1 Mitochondrial transcription termination factor family protein; Swiss-Prot: sp|Q84X53|MTEF1_ARATH Transcription termination factor MTEF1, chloroplastic; TrEMBL-Plants: tr|I3T584|I3T584_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0136100 LjG1.1_chr3 17434827 17438226 +
2 domain predictions
 –
LotjaGi3g1v0136100.2
n.a. Mitochondrial transcription termination factor family protein; TAIR: AT2G36000.1 Mitochondrial transcription termination factor family protein; Swiss-Prot: sp|Q84X53|MTEF1_ARATH Transcription termination factor MTEF1, chloroplastic; TrEMBL-Plants: tr|I3T584|I3T584_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0136100 LjG1.1_chr3 17434932 17437873 +
2 domain predictions
 –
LotjaGi3g1v0320600.1
n.a. Mitochondrial transcription termination factor family protein, putative; TAIR: AT5G07900.1 Mitochondrial transcription termination factor family protein; Swiss-Prot: sp|F4JVI3|MTEF5_ARATH Transcription termination factor MTERF5, chloroplastic; TrEMBL-Plants: tr|I3SXJ5|I3SXJ5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0320600 LjG1.1_chr3 68049426 68057271 +
2 domain predictions
 –
LotjaGi3g1v0508300.1
n.a. Mitochondrial transcription termination factor family protein; TAIR: AT2G21710.1 Mitochondrial transcription termination factor family protein; Swiss-Prot: sp|F4IHL3|MTEF2_ARATH Transcription termination factor MTERF2, chloroplastic; TrEMBL-Plants: tr|G7JG65|G7JG65_MEDTR Transcription termination factor family protein; Found in the gene: LotjaGi3g1v0508300 LjG1.1_chr3 92510334 92515118 -
2 domain predictions
 –
LotjaGi4g1v0011600.1
n.a. Mitochondrial transcription termination factor family protein; TAIR: AT3G18870.1 Mitochondrial transcription termination factor family protein; Swiss-Prot: sp|Q84X53|MTEF1_ARATH Transcription termination factor MTEF1, chloroplastic; TrEMBL-Plants: tr|A2Q1V4|A2Q1V4_MEDTR Mitochodrial transcription termination factor-related; Found in the gene: LotjaGi4g1v0011600 LjG1.1_chr4 1457981 1468105 +
2 domain predictions
 –
LotjaGi4g1v0080900.1
n.a. Mitochondrial transcription termination factor family protein; TAIR: AT4G38160.1 Mitochondrial transcription termination factor family protein; Swiss-Prot: sp|Q9SZL6|MTEF6_ARATH Transcription termination factor MTERF6, chloroplastic/mitochondrial; TrEMBL-Plants: tr|I3SZ16|I3SZ16_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0080900 LjG1.1_chr4 10545887 10547865 +
2 domain predictions
 –
LotjaGi4g1v0080900.2
n.a. Mitochondrial transcription termination factor family protein; TAIR: AT4G38160.1 Mitochondrial transcription termination factor family protein; Swiss-Prot: sp|Q9SZL6|MTEF6_ARATH Transcription termination factor MTERF6, chloroplastic/mitochondrial; TrEMBL-Plants: tr|I3SZ16|I3SZ16_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0080900 LjG1.1_chr4 10546384 10547394 +
2 domain predictions
 –
LotjaGi4g1v0343200.1
n.a. Mitochondrial transcription termination factor family protein; TAIR: AT5G07900.1 Mitochondrial transcription termination factor family protein; Swiss-Prot: sp|Q9C6A1|MTEFE_ARATH Transcription termination factor MTERF15, mitochondrial; TrEMBL-Plants: tr|I3SXJ5|I3SXJ5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0343200 LjG1.1_chr4 72287388 72289058 +
2 domain predictions
 –
LotjaGi4g1v0343400.1
n.a. mitochondrial transcription termination factor-related / mTERF-like protein; TAIR: AT5G07900.1 Mitochondrial transcription termination factor family protein; Swiss-Prot: sp|Q9C6A1|MTEFE_ARATH Transcription termination factor MTERF15, mitochondrial; TrEMBL-Plants: tr|I3SXJ5|I3SXJ5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0343400 LjG1.1_chr4 72324352 72326027 -
2 domain predictions
 –
LotjaGi4g1v0343700.1
n.a. Mitochondrial transcription termination factor family protein; TAIR: AT5G07900.1 Mitochondrial transcription termination factor family protein; Swiss-Prot: sp|Q9FK23|MTEF8_ARATH Transcription termination factor MTERF8, chloroplastic; TrEMBL-Plants: tr|I3SXJ5|I3SXJ5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0343700 LjG1.1_chr4 72345306 72347464 +
2 domain predictions
 –
LotjaGi4g1v0457500.1
n.a. Mitochondrial transcription termination factor family protein; TAIR: AT2G44020.1 Mitochondrial transcription termination factor family protein; Swiss-Prot: sp|Q9ZT96|MTEF4_ARATH Transcription termination factor MTERF4, chloroplastic; TrEMBL-Plants: tr|A0A0L9T8G5|A0A0L9T8G5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0457500 LjG1.1_chr4 82883882 82885818 -
2 domain predictions
 –
LotjaGi4g1v0457500.2
n.a. Mitochondrial transcription termination factor family protein; TAIR: AT2G44020.1 Mitochondrial transcription termination factor family protein; Swiss-Prot: sp|Q9ZT96|MTEF4_ARATH Transcription termination factor MTERF4, chloroplastic; TrEMBL-Plants: tr|A0A0L9T8G5|A0A0L9T8G5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0457500 LjG1.1_chr4 82884049 82885564 -
2 domain predictions
 –
LotjaGi5g1v0067800.1
n.a. Mitochondrial transcription termination factor family protein, putative; TAIR: AT5G07900.1 Mitochondrial transcription termination factor family protein; Swiss-Prot: sp|Q9C6A1|MTEFE_ARATH Transcription termination factor MTERF15, mitochondrial; TrEMBL-Plants: tr|A0A1J7HZR1|A0A1J7HZR1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0067800 LjG1.1_chr5 11295895 11298733 -
2 domain predictions
 –
LotjaGi5g1v0279700.1
n.a. Mitochondrial transcription termination factor family protein; TAIR: AT4G09620.1 Mitochondrial transcription termination factor family protein; Swiss-Prot: sp|Q9ZT96|MTEF4_ARATH Transcription termination factor MTERF4, chloroplastic; TrEMBL-Plants: tr|A0A0S3SNH5|A0A0S3SNH5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0279700 LjG1.1_chr5 59489129 59491823 +
2 domain predictions
 –
LotjaGi5g1v0279700.2
n.a. Mitochondrial transcription termination factor family protein; TAIR: AT4G09620.1 Mitochondrial transcription termination factor family protein; Swiss-Prot: sp|Q9ZT96|MTEF4_ARATH Transcription termination factor MTERF4, chloroplastic; TrEMBL-Plants: tr|A0A0S3SNH5|A0A0S3SNH5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0279700 LjG1.1_chr5 59490359 59491527 +
2 domain predictions
 –
LotjaGi6g1v0185500.1
n.a. Mitochondrial transcription termination factor family protein; TAIR: AT5G07900.1 Mitochondrial transcription termination factor family protein; Swiss-Prot: sp|Q9FM80|MTEF9_ARATH Transcription termination factor MTERF9, chloroplastic; TrEMBL-Plants: tr|A0A0B2NW02|A0A0B2NW02_GLYSO Uncharacterized protein; Found in the gene: LotjaGi6g1v0185500 LjG1.1_chr6 47982403 47985050 -
2 domain predictions
 –
LotjaGi6g1v0307200.1
n.a. Mitochondrial transcription termination factor family protein, putative; TAIR: AT5G07900.1 Mitochondrial transcription termination factor family protein; Swiss-Prot: sp|Q84X53|MTEF1_ARATH Transcription termination factor MTEF1, chloroplastic; TrEMBL-Plants: tr|G7IPZ5|G7IPZ5_MEDTR Transcription termination factor family protein; Found in the gene: LotjaGi6g1v0307200 LjG1.1_chr6 62437115 62442451 -
2 domain predictions
 –
LotjaGi6g1v0307500.1
n.a. Mitochondrial transcription termination factor family protein, putative; TAIR: AT5G07900.1 Mitochondrial transcription termination factor family protein; Swiss-Prot: sp|Q9FK23|MTEF8_ARATH Transcription termination factor MTERF8, chloroplastic; TrEMBL-Plants: tr|G7IPZ8|G7IPZ8_MEDTR Transcription termination factor family protein; Found in the gene: LotjaGi6g1v0307500 LjG1.1_chr6 62460887 62462345 -
2 domain predictions
 –
LotjaGi6g1v0307600.1
n.a. Mitochondrial transcription termination factor family protein, putative; TAIR: AT5G07900.1 Mitochondrial transcription termination factor family protein; Swiss-Prot: sp|Q9FK23|MTEF8_ARATH Transcription termination factor MTERF8, chloroplastic; TrEMBL-Plants: tr|G7IPZ8|G7IPZ8_MEDTR Transcription termination factor family protein; Found in the gene: LotjaGi6g1v0307600 LjG1.1_chr6 62475442 62476900 -
2 domain predictions
 –
LotjaGi6g1v0307700.1
n.a. Mitochondrial transcription termination factor family protein; TAIR: AT5G07900.1 Mitochondrial transcription termination factor family protein; Swiss-Prot: sp|Q9FK23|MTEF8_ARATH Transcription termination factor MTERF8, chloroplastic; TrEMBL-Plants: tr|G7IPZ8|G7IPZ8_MEDTR Transcription termination factor family protein; Found in the gene: LotjaGi6g1v0307700 LjG1.1_chr6 62489853 62495325 -
2 domain predictions
 –
LotjaGi6g1v0307700.2
n.a. Mitochondrial transcription termination factor family protein; TAIR: AT5G07900.1 Mitochondrial transcription termination factor family protein; Swiss-Prot: sp|Q9SZL6|MTEF6_ARATH Transcription termination factor MTERF6, chloroplastic/mitochondrial; TrEMBL-Plants: tr|G7IPZ5|G7IPZ5_MEDTR Transcription termination factor family protein; Found in the gene: LotjaGi6g1v0307700 LjG1.1_chr6 62492412 62495298 -
2 domain predictions
 –