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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0154400 |
| Transcript ID | LotjaGi6g1v0154400.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | EH domain-containing protein 1; TAIR: AT3G20290.1 EPS15 homology domain 1; Swiss-Prot: sp|Q94CF0|EHD1_ARATH EH domain-containing protein 1; TrEMBL-Plants: tr|A0A199W5Q7|A0A199W5Q7_ANACO EH domain-containing protein 1; Found in the gene: LotjaGi6g1v0154400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:43264809..43270745) extracted from Lotus japonicus Gifu genome v1.2.
GTTCATATTTTTGAGGAATTGATCTCATTATATAAGCTCTTTTAAAAGGGAAAAGATAAATGCACGTGAATGGTGTAATG TTGAATATTCCTTTGTAGAACCAGGGTGCAAAGTTGTGATTAAGATTTTTTTAAATCACCCCATTTTTCCAATTAATCCA TCTGTGTTAATTTTTTGTGCAAAATAAATTGGTTTATCAATTTACTTATTTATGAATAATGGGGTGACTAGATGATTAAG TTTTTGCAGATGGTGATTGTCGTTTTACCGGGAATGAAGCCACCAAGTTTTTTGCCATGTCGAACTTGTCCCGACAAGAT CTTAAGCAGGTTTTGAATTTCTTTTATTTGTTTTTGTTTATTGGAACAACGTTTATATATAGATAAGATTGGTGTATTTG ACAATTCTATTTGTTTGCTAATGATGCTTGGTCTCTCTTGTTTTTTCTTTCTTTTCCTTTTAACTTAGTTGTTTCTTTGT TGCTCCCCTTCCCAAAATAAGGTGTGGGCTATTGCAGATTCAAAGAGAGAAGGATATCTTGGTATCAAAGAATTTGTCAT TGCAATGCAGGTACCTTTTTTGTGAAAAATATATTTGCTTTATTTTAAGCTTGATGCTAACCAATTTCCAGAATCTAACC CATTTGAATTATAGCTAATTTCTCTGGGACAAGCTGGACACCCAATAACACATGATCTTTTGACTAGTGATGGTAAGTTC TGGACATATAGGTTTATCTTCTATTATATGGTTGAATGATACTGTCTTTATCATTTAAAGATTATCAAATGCACATATTT GTTGGTCTTAAGTGTTTATATTATCAAGCTACCAGCTGATTGAAGCTTAACTTATATTTCAGTTTTGAAAAACGCTAAAC CACCCACAATGGAGGGTTTGGATAAATTAATTGCAGTAAGTATTTTTTTAGTTTTTTGGTTTATATTTTATGTTCATTTA GTGGAAGTGCTTATCAGCACTTGGCTTTGTGCAGAAGAAAAAGCGCAAACATAAAGACAAAGATCATGGTAATATATTTC TCATTTCTCTTACATAAGGCTCATTTTGCTTTTGGATTTTATATTTCTTTCTTCTTTTCTCTTGAAATTTCAAATTGGAC TAACGAGAAATAATGCAGGTAGCACACTGTCATCATCTTCAAGTAATTGGTTTAATGCAAAGTCAACAAAAAAGGTAAGC AATTATGTTACTTTTATAATATTACTCCGAGTGTTTCTAGGTAAGCATTATCCTTGTCTTTCACTAAGGAAAATATTGGA TACTTAGTGTCTGTTTGGTTCCACATTTGAGAGCCTTATAATCAATTCTCATTTACCATAATCATTTTAGGTGGTTATAT TGATGTTTGACAACGACTAAGAGAATTGATTCTAGTGCCAAAATCATTTTTGCGATGAATCTAGGGAAAGCAGATTTTGC AGTGGACATAATCAATTGTGAGATTTCATAACTGGATTTTACAAAATTAATAGAAAATATTTTTCTCATAAACGTATCCG AACATATATCACTTCATTTTCAACTCACTTTTACCATAATCAATTCTATCCAAAATCAATTATGATAACACTGATCCAAT GAGAGACTTGATTTGCTTAAGTTCAGGGCATTTTATATCACCATGCTTTCTTAAAGCATAAGAAATTGAATTTGGTTAAA ATTTCTCTGTATTTGTTAGGTGCATGCTATGAGTTGTATAACAGCTACAAAAGCTTAAACTTAATTTCATAGAGGCTTAT TATTCTTCATTTTTTATTATCTTCTCTTTCCGTTAAAGATTCTGAATCTAGCATTTCAAGCAATGGATGGTTAGAGGAAC GGATTAAAATGAAATTTTTGGTCTTTTTACTATATATTTAGTTATTGCAACCTGTACTGGGTCAGAGAACTATAAATTTA TTTGGAAATTTTAGCTAATTACTTTACTGGATTTGAATTGAGCTAAGCAGCATAGATTCTGAGAATTGACATGGTAAAAT TATGAAATATTCATGTTTCATTGAATTTCTTTCTAGGCAGTTATTAGGGGACTGAAACCGACATTGTCATGTTACTAGTA TGTTTGCAAGCAACTTAAGCTAGTATTGGTAATGTGCTTGAGACTGAACTAGTGAGAATGGAGGTGTCAATTTGGAATTG TTAACATCTTGTTTTTGGACTAACAAATTGCGTGTGTTTCTCATATCTATCTAATTTGGTTATGATGTTACAGTAGATAT ATTCTTGAGGTTGCTCTTTTATATTCTTCGCTGCTTCCTTGCTATTGTTAGTTTTTTAAAATCTGACAAATGCGATCATA TGGATTTTTAACTTACATTTTTTTGTGCATGTGTTTTAGATACCTGAGTCCTCTGTGACATCAGTTACCGATGGTTTGAA GAGACTCTACATTAAGAAGTTGAAGCCTTTAGAAGTTACTTACAACTTTAATGATTTTGTATCTCCTTTATTGGTGAGTA GGTAACCCTGATTGATTTGTTTAGCAGAGAAATATTGCTAGATATTCTAAATTCATAGTATTCTAGATTCGAAGTCACTT GTTTAGAGTCCGTTCGGAAGCGGATCAGATAACACTTATTGGAAATTATCCAGGGCTTTTTTCTAGTAGATAAACTCTAA TAAATACTCTTTAGTCTGTATTGTGACCGTGGTTTAAATATGGACATGTGGATACCCAATCAGGTTCTCTATTAATTGTT ATTCCTTACTGCAGACAAATAGTGATTTCGATTACAAACCTATGGTTCTGCTTTTGGGTCAATACTCAACTGGGAAAACA ACATTTATTAAACATATGCTTAAAAGTGATTATCCAGGCAAGTGATTCTCCAACCTTTTCTATGTGTGTAGTATATTTGT GAGAGTGCTCATATCTATTATCCAATATGTTACTGATTAATATTTTTCTCAATTACTTTCAATAGGAGCTCATATTGGAC CTGAGCCAACAACAGATAGGTTTGTTGTTGTCATGGTATGTCCCGGCCTTTTAATCTCCACTGATACTGATATGGTCTTT GAGTGGCACAAGTCTTCAAAGTTTTCTCAGTTTTAAATTTATATATTAAATTGACTACTAGTCCTGACATGATTCAAAAT CTTCCAAGAGTTGTTTATTGGTAAAATATTTGACTTTCTTATGCTATTGTAAACCTTAAGCCTGTAATTGCAATCTTGGA TGAACATTTTTACTAAAATGCAATGTTACATGTCTTTTCAAACTAGAATGAGTCAATGAGGGAATGGTGCTATTGAGATA AGTGATCATAAATATCATTACATTCATGGATACTGTGACAGATATACTATGTGAAGCAATAACATTCAAAGTGGGAGGGA AGGGTTTTCTATTAATTCATTCATACACGGTAGAAACCCACGATGAGCCAAGATCATGGTTGATAGAAGAAAATTCCCTC AGTTTTTTCTTCTGTCCACCATGATTTTGGCATCACCATAATTTTCTACTGTGTATCCAAACATGCACTTCGTGAGATTT CTAGGCATTTTGGGATATTTGGTCCTTAGTGTATACTTTTAACATCAACATAAGTTCCAAGTTTGATATCTTGAAATGAT GGTCATCTGTGCAGTCTGGACCTGATGAGAGAAGTATTCCTGGTAATACTGCTGCTGTCCAAGCAGATTTACCATTTGGT GGTCTTACAAAATTTGGCACATCTTTTTTGTCCAAATTTGAGTGTTCTCAAATGCCTCATCCTGTAAATACTCTAAACCC CTCCAAAATATTATGAAAATATTTTCCTTTTGTAGCTTTTGGAACTAACTTTATTCCTCAATTTCCCAAAGCTACTGGAG CATATTACCTTTGTGGACAGTCCTGGAGTTCTATCAGGAGAAAAGCAGCGGACGGAAAGATCATATGATTTTACCGGTGT AACATCTTGGTTTGCTGCTAAGAGTGATTTAATACTCCTTATGTTTGATCCTCACAAACTTGATATCAGCGATGAGTTCA AGCGTGTGATAGCATCCCTACGAGGCCATGATGATAAAATTCGAGTTGTTTTGAACAAGGCAGACCAAGTTGATACTCAA CAAGTAAGAGCATATGTAATTAAGTTTTTTTTTCAAAAGCAAAATATATATTGATGAGAAAAATGTCAGGATAAATAACC TTCCTAAAAAAGCCAAAAACCGGCATAGCCAGCAACAACCCAACCCACAACGAGCAACAACTAGTCCAACTAAAACCTCC AAAGCCGAAAAGAAAACACCAAAAGCAAACCAACCCAAAAGCCCACAAGGACCCCAAAACACCAACTTAACACTAAAACC TATACCTACCTGTGCTGACCTAAGAAGACTTAAACAAATCTATCGCAACATTGTACGGGGAGGACTTACCAGTATATTTG TATGGCCTCATGTTTGCAGCTAATGAGGGTATATGGTGCACTAATGTGGTCACTTGGGAAGGTGCTGAATACTCCTGAAG TCATGCGTGTATATATTGGGTAAGTCACTTCATGTGTGTGTGTGCACTCTATTGTCAATCTTGAAATGTTGTCTATTGCA ATTACAAGTTTTGAGCTAAGCATTTTTTTGCATGCCATGAAATTGCATGTCTATTATTTTTGCTGGTACACTTCATATTT CTCACCTCTGTACACATTCCTATGAAACTTGGTTGCGATTTAACTGACTTTTTCCTCCTTGCTTATGAGACTACCTTGTG CTCTTCTCTGATCAAATAACTTATTTTGGCAGCTCCTTCAATGACAAGCCTTTAAATGATGCTATTAGTGGTCCACTTGG CAGTGAACTCTTCGAAAAAGAACAGGAAAACCTTCTTTCAGATCTCAAAGATATACCTAAAAAGGCCTGTGATCGAAAAG TGAGTTTTTTTTTTCACCATGCAACATAATAATAAATTTCCAATATCATAAAGATTTGACAAGGATTTACATGACTTTCA ATGGCCAAACACAACTCTCCTCCTTTCTTTGGATTTGTGGATTGTTATGTCCTCTTAATATTAATTACGAAAAGGCTTTG ATTATTGTTAATAGTATTTTTCCGCTAAATTTTGCATGTTTGCAAACATTTTCAATGAGGTTTCATTCAACGTTTAAAAT AATGTTTGAACAAGGAAGATTGGAATATGGATGGCATATGAATGAAATCATAAGGAGTTAAGTCTATTGAATTAAGAGTA TTGATGCATTTAATTTGGGGGGAATCACTATTTTAGTACAAAAGCTATTCTCCTCATAGCTTCTGTTGTAATTTTGTGCA TGCAAGTTTGATGTAATATAATCTTACTTTTGTTTCACTATTGATTATAGGCTGCTATTATAGGATGTTATCTAATATCT TGTATTTCAATAACCAGTTAAATCACTAATCATGTTTTCATTTGTTGAAATTACTTCCTTTAATAATTTAGCGACATTTG TGCATATGGTAGATCAATGAATTTGTAAAACGAGCCCGAGCTGCGAAGATACATGCTTGTATCATCAGCCATCTGAAAAA GAAGATGCCTGCCATGATGGGGAAAGCTAAAGCTCAGCAAAAGCTTATTGATAATTTGGAGGATGAATTTGCAAAGGTAT GAATCCAACTCTGCACATTCTTTCTTTTCACATCATGTGTTTAGCTATTAAAAGTATGTTTATATCATAACTCATCAATA TGCATATGTTGCTATGATAAAGATTGGAAATTGAATTGCATGTGTCTAAGTCTAACACAAATTCTAAACAGGTACAAAAG GAGTTCCATCTACCAGCTGGAGACTTCCCAAATGTTGATCACTTCAAGGAGACCTTGAATGGTTACAACATTGGCAAATT TGAGAAATTGAAACCAAAGATGACACAATCTGTGGATGACATGCTTGCTTACGACGTTCCTAACCTCTTAAAGACTTTCA GAAATCCCTATGGTTAA
CDS sequence (LotjaGi6g1v0154400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCGAACTTGTCCCGACAAGATCTTAAGCAGGTGTGGGCTATTGCAGATTCAAAGAGAGAAGGATATCTTGGTATCAA AGAATTTGTCATTGCAATGCAGATACCTGAGTCCTCTGTGACATCAGTTACCGATGGTTTGAAGAGACTCTACATTAAGA AGTTGAAGCCTTTAGAAGTTACTTACAACTTTAATGATTTTGTATCTCCTTTATTGACAAATAGTGATTTCGATTACAAA CCTATGGTTCTGCTTTTGGGTCAATACTCAACTGGGAAAACAACATTTATTAAACATATGCTTAAAAGTGGAGCTCATAT TGGACCTGAGCCAACAACAGATAGGTTTGTTGTTGTCATGTCTGGACCTGATGAGAGAAGTATTCCTGGTAATACTGCTG CTGTCCAAGCAGATTTACCATTTGGTGGTCTTACAAAATTTGGCACATCTTTTTTGTCCAAATTTGAGTGTTCTCAAATG CCTCATCCTCTACTGGAGCATATTACCTTTGTGGACAGTCCTGGAGTTCTATCAGGAGAAAAGCAGCGGACGGAAAGATC ATATGATTTTACCGGTGTAACATCTTGGTTTGCTGCTAAGAGTGATTTAATACTCCTTATGTTTGATCCTCACAAACTTG ATATCAGCGATGAGTTCAAGCGTGTGATAGCATCCCTACGAGGCCATGATGATAAAATTCGAGTTGTTTTGAACAAGGCA GACCAAGTTGATACTCAACAACTAATGAGGGTATATGGTGCACTAATGTGGTCACTTGGGAAGGTGCTGAATACTCCTGA AGTCATGCGTGTATATATTGGCTCCTTCAATGACAAGCCTTTAAATGATGCTATTAGTGGTCCACTTGGCAGTGAACTCT TCGAAAAAGAACAGGAAAACCTTCTTTCAGATCTCAAAGATATACCTAAAAAGGCCTGTGATCGAAAAATCAATGAATTT GTAAAACGAGCCCGAGCTGCGAAGATACATGCTTGTATCATCAGCCATCTGAAAAAGAAGATGCCTGCCATGATGGGGAA AGCTAAAGCTCAGCAAAAGCTTATTGATAATTTGGAGGATGAATTTGCAAAGGTACAAAAGGAGTTCCATCTACCAGCTG GAGACTTCCCAAATGTTGATCACTTCAAGGAGACCTTGAATGGTTACAACATTGGCAAATTTGAGAAATTGAAACCAAAG ATGACACAATCTGTGGATGACATGCTTGCTTACGACGTTCCTAACCTCTTAAAGACTTTCAGAAATCCCTATGGTTAA
Protein sequence (LotjaGi6g1v0154400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSNLSRQDLKQVWAIADSKREGYLGIKEFVIAMQIPESSVTSVTDGLKRLYIKKLKPLEVTYNFNDFVSPLLTNSDFDYK PMVLLLGQYSTGKTTFIKHMLKSGAHIGPEPTTDRFVVVMSGPDERSIPGNTAAVQADLPFGGLTKFGTSFLSKFECSQM PHPLLEHITFVDSPGVLSGEKQRTERSYDFTGVTSWFAAKSDLILLMFDPHKLDISDEFKRVIASLRGHDDKIRVVLNKA DQVDTQQLMRVYGALMWSLGKVLNTPEVMRVYIGSFNDKPLNDAISGPLGSELFEKEQENLLSDLKDIPKKACDRKINEF VKRARAAKIHACIISHLKKKMPAMMGKAKAQQKLIDNLEDEFAKVQKEFHLPAGDFPNVDHFKETLNGYNIGKFEKLKPK MTQSVDDMLAYDVPNLLKTFRNPYG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 35 | 35 | 8.732 | ||
| Gene3D | 1 | 45 | 45 | 7.7E-7 | – | |
| SUPERFAMILY | 2 | 33 | 32 | 5.84E-6 | ||
| ProSiteProfiles | 4 | 39 | 36 | 8.265 | ||
| PANTHER | 32 | 422 | 391 | 3.7E-263 | – | |
| PANTHER | 32 | 422 | 391 | 3.7E-263 | – | |
| Pfam | 46 | 78 | 33 | 1.6E-15 | ||
| Gene3D | 46 | 409 | 364 | 2.2E-150 | – | |
| SUPERFAMILY | 72 | 347 | 276 | 5.89E-28 | ||
| ProSiteProfiles | 77 | 310 | 234 | 22.973 | ||
| CDD | 82 | 323 | 242 | 5.29927E-145 | – | |
| Pfam | 83 | 239 | 157 | 9.9E-10 | ||
| Gene3D | 83 | 308 | 226 | 2.2E-150 | – | |
| Pfam | 315 | 417 | 103 | 1.6E-36 | ||
| Coils | 348 | 368 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi6g1v0154400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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