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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0024800 |
| Transcript ID | LotjaGi1g1v0024800.6 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | EH domain-containing protein 1; TAIR: AT3G20290.1 EPS15 homology domain 1; Swiss-Prot: sp|Q94CF0|EHD1_ARATH EH domain-containing protein 1; TrEMBL-Plants: tr|A0A151U2E6|A0A151U2E6_CAJCA EH domain-containing protein 1; Found in the gene: LotjaGi1g1v0024800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:2962869..2968274) extracted from Lotus japonicus Gifu genome v1.2.
CTGAGATCGATGGAGTTCGACCCGATCCCGTTCGGTTCGTGCTCCAAAGAGTACCAGTCAATCTACCAGGACTGGTTCAA TTTTGCTGATTCAGGTAACTTGCTCTTCTCCATTGAGATTCCAATGGTTTTTTTGGAACGATTGTGTCACTGTGCATGGT TTTTTTTCAGATAACGATGGTCGCATTACTGGGAATGATGCCACCAAGTTTTTCGCCATGTCCAACTTGTCTCGCCAAGA TCTTAAGCAGGTTTCTTTATTATCATTACTGTTGTTGTTACCATGATCATTGCTTTGGAGTGATGAGAAAACGATTAATA TAGACGGGGATTGTGAATTTGTTTCTGATGGTTCAGCATTTGTGGGATAATTACCTTGTATGACTAGTGTCTTAGTAACT AGTAAGTGGGTTGGGAAGAGTGAGTTGAGAATGGAGGGAGTTTGAAACTGGGGGTGCATGAATGATCAAAGATTTGGTTG TTTGGTACTTTGGTTAGGGAATAAAGAGGAAAGTAATGAAAATTGGTCATTAACACATTATTGGCATGCCCTGCTTAATT TTGGTATGTTTTCCTCATGAAGAAATGAAGTGAGGTGATATTGAAGTTGACTTGCAAATTGCAATGCAAAGAGAAATGAC TGAGATGATAATGTGGTTTAATAAGTGTTTGAATTTGTTTTCTCCGCGGATATGTTGTATTTGTGTTCATCGGTTATTTC ACTCCAAACAATAAATAACAGTATGTTGCTGATTTTCAAATTTTATCACTTTTTTACCTTTTCCTTCTAGCATGCACTGG TGAACTTTGAACTTCCTGTCATTCGTATCTTAAATTTCTCTCCATTTTTGCTTTGCTAACTTGGTCTTGAATCGGGTTGA ACTTTGATTTGTGGAAATGCCTCATAGGTTATTCAGCAGCTGCATTTTTTTATTCTTTGCAAGCAAGATTTAAATCTAAT CCATTATTGCTATAGTTTTACATTGTCACTTGTCAGTGAGGCAGTGTCAACTTTGCTGTCAGTGGGCCATAGTGCCAACT ATTTAAAATAACTTTTAAACTCTATTTTGCAAGTGACATATTTTAATTCCTCCTATGGTGTGGCACTTAACTGTTTTATG GTAATATTTGATCTTAGACTGGTAGTGGATTCAATTTGAACTCTTACACTTGACTCAAGTTGAAGTTGGCTTTGATTTAA TTTGATCTCCATCAATTGGAATGGTTTGGGCATTTGATGATTGAGTTGTTTATATAAGTTGTACTTATACCCTTTGACTT ATTCCTTTAACTAAATTGTTTCTTTGTTTATTACTATTACCAAAACAAGGTGTGGGCTATTGCAGATTCAAGACGACAAG GATATCTTGGTTTCCAAGAGTTTATAATTGCTATGCAGGTACAAATATATTATCCTTTATTGGCGTTTAATGCTAACAAA TTTCCAGAATCTTACACATTTGAAATGTAGGTAGTTTCTTTGGCACAATCTGGGCACCCTGTAACACATGATCTGCTGAG TAGTGATGGTAAGTTATGTATGTTTAGGTTTGTCTTTATTGTTTTGTTCAAATAACTTTCTATAATTGTATTAATATGTT TTGAAATTCACATTCTTGGTGCTGTCTACATTTGTGGACTGTGAATTTCTATCATATAAGATTTATCTAATGAAAGCTTA ACTTTTATTTCAGTTGATTTGAAAAATCTGAAACCTCCCACAATGGAGGGTTTGGATGCATTACTAGCTGTAAGTATTTC TTTTTAATGTTTTTTATTTACGGTGCTAATATTTTTATGTTTATTTAATGAAAGTGCTTACTTGGCTGTGTTTATCCAGA AGAAAAAGCATAAACAAAAAGATGTAGATGTAAATGGTAATTTATTTCTTATTTTAGTGAATACGGGCATTCTTATTGAT TTTGTTTCTCTCTTCAAAATCCAAGTTCAATAATCAACAAAAATGCAGGTAGTTCTCAATTGCAGCCATCACCATCAAGT AATTGGTTTTCTTCGAAGTCAACCAAAAAGGCAAGCATTCTTTTACTGTGTCTTTGATATTTCTCTGTGCATTATTTCTG CTAGAGAGCATACTGAATGTTCATTTCAAATTTTCATCTAATGTCAGGCTTGGGTCATTCTTTACCTGCTTTATTATGTT CTATTTCATTTTGTTTCATCACGGTCTTGAATAGTATCCCTGGGAGGTTTTGGTTTAGTTACTCTATCTCTTTTCTTCTT TTATAAGATGACGATACAAATAATGTTTAGCCAGTTATTAGGGCCTGAAACCAACATTATCTTTTGACTTGTATGTAACT TGTAAGTGTCTAAGTGAAATAGACCTAAGAGTGTGCTTGTCTGCCTGATACTCCACAACAAAATATGAATATTTCAGTTT TGAACTGTTATCAAATTTGTTCTTTTTGGACTAACAAAATATGCATTTTTATCTTGTATCTATCTAATTTACTTATTGAT AGTACATAAATCAAGTTGGCAGCAGCACCCTAAAGTCTCTTCTGTATATATGTTATCTAAGCCTTTTTATCTGCGTGCAT TGCTGCTTCTTTGCAATTTCCTGTACTTAAAACTTGTCCAATACATTCTAATAGGGTTTTCACTTGAACTTTTGGCGCAT ATTTCCACAGGTTCCCCTTTCCTCCGTGACATCAATAATTGACGGCTTGAAGAGACTCTACATTCAGAAATTGAAGCCAT TAGAAGTTACTTACCGTTTTAATGATTTTGTATCCCCATTATTGGTCAGTAAGTGACCTTGTTCAGAAATAACTATCTAC TCTAGATTTCATATTTTTTCTTTCTTCAGCTCTTCAGCCATGTTACTTTTTTTTAATATCGACAAAGATATATAGTTGGG TCTTTAGTTGATTGCAACTCTTTATATATTGCAGACAAATAGTGATTTTGATGCCAAACCAATGGTTATGCTTTTGGGTC AGTACTCAACCGGTAAAACAACATTTATCAAACATCTGCTTAAAAGTAGTTATCCAGGCAAGTAATTATCCTTTCTCTAT ATCCTTTGTGTGCATATGTTTGGCACTGCTTATAAGTGTATTATAAATATTTGTTTCTGACTTCTTTTTCATAACTGTCT ATAGGAGCACATATTGGACCTGAGCCTACAACTGATAGGTTTGTTGTTGTTATGGTATGTGCCAGCCGAACCAATTTATC TCCCACGACTCTCTAATACATTGAAAATTTTCTTGATTTTAAATTTCTAAATTGGGACTTCAAACTCCTAGCAAGCTTCA ACATCTTCATGGAAGTGCTAGAATTTCTCAATGCACTTAGTAGTTTATCCTGTAGCATTAGTGCCAAGTTTAGACAATTT GAATTCTTGGAGCTTTTTCAATAGATCTATTACTCTATCTTGTAGTCTTCTTGGAAAATGAGTTATTGCATCAGTTTTAA CTAGCAAATGGTACTGCTGTACAGTCTGGACCTGATGAGAGAAGTGTTCCTGGAAATACTGTTGCTGTCCAAGCAGACAT GCCATTTAGTGGTCTTACAACTTTTGGCACAGCCTTTTTGTCAAAGTTTGAGTGTTCACAAATGCCTCATCCTGTAAGTT GCTCAAGAGCCATTGAAAAAGTTCACAAGATTCTCCTTTTGTAGCATTTGTACTTAACTATTTTTTATTCGTCCAAAGCT ACTGGAGCACATTACATTTGTGGACAGTCCTGGAGTTCTATCTGGAGAAAAGCAACGGACACAAAGAGCATATGACTTTA CGGGTGTAACGTCTTGGTTTGCTTCTAAGTGTGATTTGATACTCCTTCTCTTTGATCCTCACAAACTTGATATCAGTGAT GAGTTCAATCGTGTGATATCATCCTTACGGGGGCATGATGATAAAATTCGAGTGGTTTTGAACAAGGCAGACCAAGTTGA TACTCAACAAGTAAGAGCTTGTGTAGTTAAACTTCTATTTGTTTATTTAATGTGGTCAGGGTAAACATAACCTATATTTG GCCCCATTTTGCAGCTGATGAGGGTTTATGGAGCTTTAATGTGGTCACTTGGGAAGGTGCTGAATACACCTGAAGTCAGT CGTGTGTATATTGGGTATGTCACTTCATGTATGCACTCCTCTGTCAATGTTTACGTGTTTGTTTTTGACATAGAGAATTC GACAGAGACTACTTTGTTTCTACATTCCTAAGTTTTAGGAGTTTCTCTTTATGTTTTAGGGTGGAAGACTTTTTTACTCC TTTTACTATGTTTTATTCAATTTAGATGTAATGTAACTGTCTTTCTTTTCCTTATGTATGGGGTTACCATGTGCTTTTTT GAGCTCATTTAACTTTCTCTTGGCAGCTCCTTCAACGACAAACCTGTAAATGATGCTGTCAGTGGTCCAATTGGTAAGGA ACTCTTTGAAAAAGAACAGGAAGACCTTCTTTCAGATCTGAAAGATATACCAAAAGCCGCTTGTGATCGAAGAGTGAGTT TATGCATTTAAATGTATTTCGCTTATCATAATAAATTAATAATAGTTCACTAAAATGAGATTACGTATACTTTCATGTTG ATGTTAAAAAGTAAATTATGTCCATGTTTGGTTTCATTATCTAGTTAAGTGCTAGTTAAGATTGATGTGATGAAATTACA AGGATGTCAGTCTTTCAATTTGGTTGTTTTTCTTTTTTTGTGGAAATAAAAGAAAATAATGGCCATGTTTGGTTTCATTA TCTAGTTAGTGCTGGTTATATGTTTATTTAATTAAGAATTTGCTTCTTTTCATAGTTATATCATTTGTACACATTGGCTA TTGTAGATCAATGAATTTGTAAAACGAGCACGAGCAGCCAAGATTCACGCTTACATTATCAGTCATCTTAAAAAGGAGAT GCCTGCAATGATGGGCAAAGCTAAAGCACAGCAAAAGCTCATTGATAATTTGGCAGGTGAATTTGGAAAGGTACCATTCC AACCCTTTTACCCTTCCCTGGACTCTTCCACTGGGGAGCTTTATAACATCAATTTAGTCTACAGTTGAAGCTAAAGACAA ATTCAATTCTGGTGATCATTTCTTCACAGACCTAATTATTTGAAATGAGAAGCGAATTCAAACATTCTATTATTAGTCTA TTACTTTTTATGAATCTGACTGTATATCCTTTCTGCTGACCTGCACGTCTCTTTGGATAACACTTAAAATGCATGTACTT GACCATTAACTTTGAAACAGGTACAAAGAGAGTTCCATTTGCCTCCTGGTGACTTCCCAAATCTGGAGCATTTCAGGGAG GTCTTGGGTGGTTACAATTTTGACAAGTTTGAGAAATTGAAACCAAAAATGGTACAAGCAGTTGATGACATGCTAGCTTA CGACATTCCTAACCTCTTGAAGAACTTCAGGAATCCCTATGACTAA
CDS sequence (LotjaGi1g1v0024800.6) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGTTCGACCCGATCCCGTTCGGTTCGTGCTCCAAAGAGTACCAGTCAATCTACCAGGACTGGTTCAATTTTGCTGA TTCAGATAACGATGGTCGCATTACTGGGAATGATGCCACCAAGTTTTTCGCCATGTCCAACTTGTCTCGCCAAGATCTTA AGCAGGTGTGGGCTATTGCAGATTCAAGACGACAAGGATATCTTGGTTTCCAAGAGTTTATAATTGCTATGCAGGTTCCC CTTTCCTCCGTGACATCAATAATTGACGGCTTGAAGAGACTCTACATTCAGAAATTGAAGCCATTAGAAGTTACTTACCG TTTTAATGATTTTGTATCCCCATTATTGACAAATAGTGATTTTGATGCCAAACCAATGGTTATGCTTTTGGGTCAGTACT CAACCGGTAAAACAACATTTATCAAACATCTGCTTAAAAGAGCACATATTGGACCTGAGCCTACAACTGATAGGTTTGTT GTTGTTATGTCTGGACCTGATGAGAGAAGTGTTCCTGGAAATACTGTTGCTGTCCAAGCAGACATGCCATTTAGTGGTCT TACAACTTTTGGCACAGCCTTTTTGTCAAAGTTTGAGTGTTCACAAATGCCTCATCCTCTACTGGAGCACATTACATTTG TGGACAGTCCTGGAGTTCTATCTGGAGAAAAGCAACGGACACAAAGAGCATATGACTTTACGGGTGTAACGTCTTGGTTT GCTTCTAAGTGTGATTTGATACTCCTTCTCTTTGATCCTCACAAACTTGATATCAGTGATGAGTTCAATCGTGTGATATC ATCCTTACGGGGGCATGATGATAAAATTCGAGTGGTTTTGAACAAGGCAGACCAAGTTGATACTCAACAACTGATGAGGG TTTATGGAGCTTTAATGTGGTCACTTGGGAAGGTGCTGAATACACCTGAAGTCAGTCGTGTGTATATTGGCTCCTTCAAC GACAAACCTGTAAATGATGCTGTCAGTGGTCCAATTGGTAAGGAACTCTTTGAAAAAGAACAGGAAGACCTTCTTTCAGA TCTGAAAGATATACCAAAAGCCGCTTGTGATCGAAGAATCAATGAATTTGTAAAACGAGCACGAGCAGCCAAGATTCACG CTTACATTATCAGTCATCTTAAAAAGGAGATGCCTGCAATGATGGGCAAAGCTAAAGCACAGCAAAAGCTCATTGATAAT TTGGCAGGTGAATTTGGAAAGGTACAAAGAGAGTTCCATTTGCCTCCTGGTGACTTCCCAAATCTGGAGCATTTCAGGGA GGTCTTGGGTGGTTACAATTTTGACAAGTTTGAGAAATTGAAACCAAAAATGGTACAAGCAGTTGATGACATGCTAGCTT ACGACATTCCTAACCTCTTGAAGAACTTCAGGAATCCCTATGACTAA
Protein sequence (LotjaGi1g1v0024800.6) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEFDPIPFGSCSKEYQSIYQDWFNFADSDNDGRITGNDATKFFAMSNLSRQDLKQVWAIADSRRQGYLGFQEFIIAMQVP LSSVTSIIDGLKRLYIQKLKPLEVTYRFNDFVSPLLTNSDFDAKPMVMLLGQYSTGKTTFIKHLLKRAHIGPEPTTDRFV VVMSGPDERSVPGNTVAVQADMPFSGLTTFGTAFLSKFECSQMPHPLLEHITFVDSPGVLSGEKQRTQRAYDFTGVTSWF ASKCDLILLLFDPHKLDISDEFNRVISSLRGHDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVLNTPEVSRVYIGSFN DKPVNDAVSGPIGKELFEKEQEDLLSDLKDIPKAACDRRINEFVKRARAAKIHAYIISHLKKEMPAMMGKAKAQQKLIDN LAGEFGKVQREFHLPPGDFPNLEHFREVLGGYNFDKFEKLKPKMVQAVDDMLAYDIPNLLKNFRNPYD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 11 | 77 | 67 | 2.26E-18 | ||
| Gene3D | 11 | 88 | 78 | 1.4E-18 | – | |
| SMART | 12 | 93 | 82 | 2.2E-4 | ||
| ProSiteProfiles | 14 | 49 | 36 | 8.823 | ||
| ProSiteProfiles | 15 | 79 | 65 | 10.746 | ||
| CDD | 19 | 77 | 59 | 1.15527E-20 | ||
| Pfam | 21 | 82 | 62 | 9.1E-8 | ||
| ProSiteProfiles | 51 | 83 | 33 | 7.065 | ||
| PANTHER | 74 | 468 | 395 | 9.3E-272 | – | |
| PANTHER | 74 | 468 | 395 | 9.3E-272 | – | |
| Gene3D | 90 | 452 | 363 | 7.0E-150 | – | |
| Pfam | 90 | 122 | 33 | 2.5E-15 | ||
| SUPERFAMILY | 117 | 390 | 274 | 1.26E-29 | ||
| ProSiteProfiles | 121 | 353 | 233 | 24.964 | ||
| CDD | 126 | 366 | 241 | 6.93373E-143 | – | |
| Pfam | 127 | 282 | 156 | 1.1E-11 | ||
| Gene3D | 127 | 351 | 225 | 7.0E-150 | – | |
| Pfam | 358 | 460 | 103 | 2.5E-37 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi1g1v0024800.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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