Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0024800 |
| Transcript ID | LotjaGi1g1v0024800.4 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | EH domain-containing protein 1; TAIR: AT3G20290.1 EPS15 homology domain 1; Swiss-Prot: sp|Q94CF0|EHD1_ARATH EH domain-containing protein 1; TrEMBL-Plants: tr|A0A1J7HUL5|A0A1J7HUL5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0024800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:2962869..2968265) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAGTTCGACCCGATCCCGTTCGGTTCGTGCTCCAAAGAGTACCAGTCAATCTACCAGGACTGGTTCAATTTTGCTGA TTCAGGTAACTTGCTCTTCTCCATTGAGATTCCAATGGTTTTTTTGGAACGATTGTGTCACTGTGCATGGTTTTTTTTCA GATAACGATGGTCGCATTACTGGGAATGATGCCACCAAGTTTTTCGCCATGTCCAACTTGTCTCGCCAAGATCTTAAGCA GGTTTCTTTATTATCATTACTGTTGTTGTTACCATGATCATTGCTTTGGAGTGATGAGAAAACGATTAATATAGACGGGG ATTGTGAATTTGTTTCTGATGGTTCAGCATTTGTGGGATAATTACCTTGTATGACTAGTGTCTTAGTAACTAGTAAGTGG GTTGGGAAGAGTGAGTTGAGAATGGAGGGAGTTTGAAACTGGGGGTGCATGAATGATCAAAGATTTGGTTGTTTGGTACT TTGGTTAGGGAATAAAGAGGAAAGTAATGAAAATTGGTCATTAACACATTATTGGCATGCCCTGCTTAATTTTGGTATGT TTTCCTCATGAAGAAATGAAGTGAGGTGATATTGAAGTTGACTTGCAAATTGCAATGCAAAGAGAAATGACTGAGATGAT AATGTGGTTTAATAAGTGTTTGAATTTGTTTTCTCCGCGGATATGTTGTATTTGTGTTCATCGGTTATTTCACTCCAAAC AATAAATAACAGTATGTTGCTGATTTTCAAATTTTATCACTTTTTTACCTTTTCCTTCTAGCATGCACTGGTGAACTTTG AACTTCCTGTCATTCGTATCTTAAATTTCTCTCCATTTTTGCTTTGCTAACTTGGTCTTGAATCGGGTTGAACTTTGATT TGTGGAAATGCCTCATAGGTTATTCAGCAGCTGCATTTTTTTATTCTTTGCAAGCAAGATTTAAATCTAATCCATTATTG CTATAGTTTTACATTGTCACTTGTCAGTGAGGCAGTGTCAACTTTGCTGTCAGTGGGCCATAGTGCCAACTATTTAAAAT AACTTTTAAACTCTATTTTGCAAGTGACATATTTTAATTCCTCCTATGGTGTGGCACTTAACTGTTTTATGGTAATATTT GATCTTAGACTGGTAGTGGATTCAATTTGAACTCTTACACTTGACTCAAGTTGAAGTTGGCTTTGATTTAATTTGATCTC CATCAATTGGAATGGTTTGGGCATTTGATGATTGAGTTGTTTATATAAGTTGTACTTATACCCTTTGACTTATTCCTTTA ACTAAATTGTTTCTTTGTTTATTACTATTACCAAAACAAGGTGTGGGCTATTGCAGATTCAAGACGACAAGGATATCTTG GTTTCCAAGAGTTTATAATTGCTATGCAGGTACAAATATATTATCCTTTATTGGCGTTTAATGCTAACAAATTTCCAGAA TCTTACACATTTGAAATGTAGGTAGTTTCTTTGGCACAATCTGGGCACCCTGTAACACATGATCTGCTGAGTAGTGATGG TAAGTTATGTATGTTTAGGTTTGTCTTTATTGTTTTGTTCAAATAACTTTCTATAATTGTATTAATATGTTTTGAAATTC ACATTCTTGGTGCTGTCTACATTTGTGGACTGTGAATTTCTATCATATAAGATTTATCTAATGAAAGCTTAACTTTTATT TCAGTTGATTTGAAAAATCTGAAACCTCCCACAATGGAGGGTTTGGATGCATTACTAGCTGTAAGTATTTCTTTTTAATG TTTTTTATTTACGGTGCTAATATTTTTATGTTTATTTAATGAAAGTGCTTACTTGGCTGTGTTTATCCAGAAGAAAAAGC ATAAACAAAAAGATGTAGATGTAAATGGTAATTTATTTCTTATTTTAGTGAATACGGGCATTCTTATTGATTTTGTTTCT CTCTTCAAAATCCAAGTTCAATAATCAACAAAAATGCAGGTAGTTCTCAATTGCAGCCATCACCATCAAGTAATTGGTTT TCTTCGAAGTCAACCAAAAAGGCAAGCATTCTTTTACTGTGTCTTTGATATTTCTCTGTGCATTATTTCTGCTAGAGAGC ATACTGAATGTTCATTTCAAATTTTCATCTAATGTCAGGCTTGGGTCATTCTTTACCTGCTTTATTATGTTCTATTTCAT TTTGTTTCATCACGGTCTTGAATAGTATCCCTGGGAGGTTTTGGTTTAGTTACTCTATCTCTTTTCTTCTTTTATAAGAT GACGATACAAATAATGTTTAGCCAGTTATTAGGGCCTGAAACCAACATTATCTTTTGACTTGTATGTAACTTGTAAGTGT CTAAGTGAAATAGACCTAAGAGTGTGCTTGTCTGCCTGATACTCCACAACAAAATATGAATATTTCAGTTTTGAACTGTT ATCAAATTTGTTCTTTTTGGACTAACAAAATATGCATTTTTATCTTGTATCTATCTAATTTACTTATTGATAGTACATAA ATCAAGTTGGCAGCAGCACCCTAAAGTCTCTTCTGTATATATGTTATCTAAGCCTTTTTATCTGCGTGCATTGCTGCTTC TTTGCAATTTCCTGTACTTAAAACTTGTCCAATACATTCTAATAGGGTTTTCACTTGAACTTTTGGCGCATATTTCCACA GGTTCCCCTTTCCTCCGTGACATCAATAATTGACGGCTTGAAGAGACTCTACATTCAGAAATTGAAGCCATTAGAAGTTA CTTACCGTTTTAATGATTTTGTATCCCCATTATTGGTCAGTAAGTGACCTTGTTCAGAAATAACTATCTACTCTAGATTT CATATTTTTTCTTTCTTCAGCTCTTCAGCCATGTTACTTTTTTTTAATATCGACAAAGATATATAGTTGGGTCTTTAGTT GATTGCAACTCTTTATATATTGCAGACAAATAGTGATTTTGATGCCAAACCAATGGTTATGCTTTTGGGTCAGTACTCAA CCGGTAAAACAACATTTATCAAACATCTGCTTAAAAGTAGTTATCCAGGCAAGTAATTATCCTTTCTCTATATCCTTTGT GTGCATATGTTTGGCACTGCTTATAAGTGTATTATAAATATTTGTTTCTGACTTCTTTTTCATAACTGTCTATAGGAGCA CATATTGGACCTGAGCCTACAACTGATAGGTTTGTTGTTGTTATGGTATGTGCCAGCCGAACCAATTTATCTCCCACGAC TCTCTAATACATTGAAAATTTTCTTGATTTTAAATTTCTAAATTGGGACTTCAAACTCCTAGCAAGCTTCAACATCTTCA TGGAAGTGCTAGAATTTCTCAATGCACTTAGTAGTTTATCCTGTAGCATTAGTGCCAAGTTTAGACAATTTGAATTCTTG GAGCTTTTTCAATAGATCTATTACTCTATCTTGTAGTCTTCTTGGAAAATGAGTTATTGCATCAGTTTTAACTAGCAAAT GGTACTGCTGTACAGTCTGGACCTGATGAGAGAAGTGTTCCTGGAAATACTGTTGCTGTCCAAGCAGACATGCCATTTAG TGGTCTTACAACTTTTGGCACAGCCTTTTTGTCAAAGTTTGAGTGTTCACAAATGCCTCATCCTGTAAGTTGCTCAAGAG CCATTGAAAAAGTTCACAAGATTCTCCTTTTGTAGCATTTGTACTTAACTATTTTTTATTCGTCCAAAGCTACTGGAGCA CATTACATTTGTGGACAGTCCTGGAGTTCTATCTGGAGAAAAGCAACGGACACAAAGAGCATATGACTTTACGGGTGTAA CGTCTTGGTTTGCTTCTAAGTGTGATTTGATACTCCTTCTCTTTGATCCTCACAAACTTGATATCAGTGATGAGTTCAAT CGTGTGATATCATCCTTACGGGGGCATGATGATAAAATTCGAGTGGTTTTGAACAAGGCAGACCAAGTTGATACTCAACA AGTAAGAGCTTGTGTAGTTAAACTTCTATTTGTTTATTTAATGTGGTCAGGGTAAACATAACCTATATTTGGCCCCATTT TGCAGCTGATGAGGGTTTATGGAGCTTTAATGTGGTCACTTGGGAAGGTGCTGAATACACCTGAAGTCAGTCGTGTGTAT ATTGGGTATGTCACTTCATGTATGCACTCCTCTGTCAATGTTTACGTGTTTGTTTTTGACATAGAGAATTCGACAGAGAC TACTTTGTTTCTACATTCCTAAGTTTTAGGAGTTTCTCTTTATGTTTTAGGGTGGAAGACTTTTTTACTCCTTTTACTAT GTTTTATTCAATTTAGATGTAATGTAACTGTCTTTCTTTTCCTTATGTATGGGGTTACCATGTGCTTTTTTGAGCTCATT TAACTTTCTCTTGGCAGCTCCTTCAACGACAAACCTGTAAATGATGCTGTCAGTGGTCCAATTGGTAAGGAACTCTTTGA AAAAGAACAGGAAGACCTTCTTTCAGATCTGAAAGATATACCAAAAGCCGCTTGTGATCGAAGAGTGAGTTTATGCATTT AAATGTATTTCGCTTATCATAATAAATTAATAATAGTTCACTAAAATGAGATTACGTATACTTTCATGTTGATGTTAAAA AGTAAATTATGTCCATGTTTGGTTTCATTATCTAGTTAAGTGCTAGTTAAGATTGATGTGATGAAATTACAAGGATGTCA GTCTTTCAATTTGGTTGTTTTTCTTTTTTTGTGGAAATAAAAGAAAATAATGGCCATGTTTGGTTTCATTATCTAGTTAG TGCTGGTTATATGTTTATTTAATTAAGAATTTGCTTCTTTTCATAGTTATATCATTTGTACACATTGGCTATTGTAGATC AATGAATTTGTAAAACGAGCACGAGCAGCCAAGATTCACGCTTACATTATCAGTCATCTTAAAAAGGAGATGCCTGCAAT GATGGGCAAAGCTAAAGCACAGCAAAAGCTCATTGATAATTTGGCAGGTGAATTTGGAAAGGTACCATTCCAACCCTTTT ACCCTTCCCTGGACTCTTCCACTGGGGAGCTTTATAACATCAATTTAGTCTACAGTTGAAGCTAAAGACAAATTCAATTC TGGTGATCATTTCTTCACAGACCTAATTATTTGAAATGAGAAGCGAATTCAAACATTCTATTATTAGTCTATTACTTTTT ATGAATCTGACTGTATATCCTTTCTGCTGACCTGCACGTCTCTTTGGATAACACTTAAAATGCATGTACTTGACCATTAA CTTTGAAACAGGTACAAAGAGAGTTCCATTTGCCTCCTGGTGACTTCCCAAATCTGGAGCATTTCAGGGAGGTCTTGGGT GGTTACAATTTTGACAAGTTTGAGAAATTGAAACCAAAAATGGTACAAGCAGTTGATGACATGCTAGCTTACGACATTCC TAACCTCTTGAAGAACTTCAGGAATCCCTATGACTAA
CDS sequence (LotjaGi1g1v0024800.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGTTCGACCCGATCCCGTTCGGTTCGTGCTCCAAAGAGTACCAGTCAATCTACCAGGACTGGTTCAATTTTGCTGA TTCAGATAACGATGGTCGCATTACTGGGAATGATGCCACCAAGTTTTTCGCCATGTCCAACTTGTCTCGCCAAGATCTTA AGCAGGTGTGGGCTATTGCAGATTCAAGACGACAAGGATATCTTGGTTTCCAAGAGTTTATAATTGCTATGCAGGTAGTT TCTTTGGCACAATCTGGGCACCCTGTAACACATGATCTGCTGAGTAGTGATGTTGATTTGAAAAATCTGAAACCTCCCAC AATGGAGGGTTTGGATGCATTACTAGCTAAGAAAAAGCATAAACAAAAAGATGTAGATGTAAATGTAATCAACAAAAATG CAGGTAGTTCTCAATTGCAGCCATCACCATCAAGTAATTGGTTTTCTTCGAAGTCAACCAAAAAGGTTCCCCTTTCCTCC GTGACATCAATAATTGACGGCTTGAAGAGACTCTACATTCAGAAATTGAAGCCATTAGAAGTTACTTACCGTTTTAATGA TTTTGTATCCCCATTATTGACAAATAGTGATTTTGATGCCAAACCAATGGTTATGCTTTTGGGTCAGTACTCAACCGGAG CACATATTGGACCTGAGCCTACAACTGATAGGTTTGTTGTTGTTATGTCTGGACCTGATGAGAGAAGTGTTCCTGGAAAT ACTGTTGCTGTCCAAGCAGACATGCCATTTAGTGGTCTTACAACTTTTGGCACAGCCTTTTTGTCAAAGTTTGAGTGTTC ACAAATGCCTCATCCTCTACTGGAGCACATTACATTTGTGGACAGTCCTGGAGTTCTATCTGGAGAAAAGCAACGGACAC AAAGAGCATATGACTTTACGGGTGTAACGTCTTGGTTTGCTTCTAAGTGTGATTTGATACTCCTTCTCTTTGATCCTCAC AAACTTGATATCAGTGATGAGTTCAATCGTGTGATATCATCCTTACGGGGGCATGATGATAAAATTCGAGTGGTTTTGAA CAAGGCAGACCAAGTTGATACTCAACAACTGATGAGGGTTTATGGAGCTTTAATGTGGTCACTTGGGAAGGTGCTGAATA CACCTGAAGTCAGTCGTGTGTATATTGGCTCCTTCAACGACAAACCTGTAAATGATGCTGTCAGTGGTCCAATTGGTAAG GAACTCTTTGAAAAAGAACAGGAAGACCTTCTTTCAGATCTGAAAGATATACCAAAAGCCGCTTGTGATCGAAGAATCAA TGAATTTGTAAAACGAGCACGAGCAGCCAAGATTCACGCTTACATTATCAGTCATCTTAAAAAGGAGATGCCTGCAATGA TGGGCAAAGCTAAAGCACAGCAAAAGCTCATTGATAATTTGGCAGGTGAATTTGGAAAGGTACAAAGAGAGTTCCATTTG CCTCCTGGTGACTTCCCAAATCTGGAGCATTTCAGGGAGGTCTTGGGTGGTTACAATTTTGACAAGTTTGAGAAATTGAA ACCAAAAATGGTACAAGCAGTTGATGACATGCTAGCTTACGACATTCCTAACCTCTTGAAGAACTTCAGGAATCCCTATG ACTAA
Protein sequence (LotjaGi1g1v0024800.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEFDPIPFGSCSKEYQSIYQDWFNFADSDNDGRITGNDATKFFAMSNLSRQDLKQVWAIADSRRQGYLGFQEFIIAMQVV SLAQSGHPVTHDLLSSDVDLKNLKPPTMEGLDALLAKKKHKQKDVDVNVINKNAGSSQLQPSPSSNWFSSKSTKKVPLSS VTSIIDGLKRLYIQKLKPLEVTYRFNDFVSPLLTNSDFDAKPMVMLLGQYSTGAHIGPEPTTDRFVVVMSGPDERSVPGN TVAVQADMPFSGLTTFGTAFLSKFECSQMPHPLLEHITFVDSPGVLSGEKQRTQRAYDFTGVTSWFASKCDLILLLFDPH KLDISDEFNRVISSLRGHDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVLNTPEVSRVYIGSFNDKPVNDAVSGPIGK ELFEKEQEDLLSDLKDIPKAACDRRINEFVKRARAAKIHAYIISHLKKEMPAMMGKAKAQQKLIDNLAGEFGKVQREFHL PPGDFPNLEHFREVLGGYNFDKFEKLKPKMVQAVDDMLAYDIPNLLKNFRNPYD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 11 | 108 | 98 | 8.4E-25 | – | |
| SUPERFAMILY | 11 | 89 | 79 | 1.55E-20 | ||
| SMART | 12 | 103 | 92 | 1.6E-10 | ||
| ProSiteProfiles | 14 | 38 | 25 | 5.168 | ||
| ProSiteProfiles | 15 | 93 | 79 | 12.828 | ||
| CDD | 19 | 85 | 67 | 5.63029E-22 | ||
| Pfam | 21 | 80 | 60 | 9.0E-8 | ||
| ProSiteProfiles | 48 | 83 | 36 | 9.576 | ||
| PANTHER | 108 | 534 | 427 | 1.7E-265 | – | |
| PANTHER | 108 | 534 | 427 | 1.7E-265 | – | |
| Pfam | 167 | 199 | 33 | 2.9E-15 | ||
| Gene3D | 167 | 518 | 352 | 5.0E-138 | – | |
| ProSiteProfiles | 183 | 419 | 237 | 18.661 | ||
| SUPERFAMILY | 194 | 456 | 263 | 9.22E-23 | ||
| CDD | 203 | 432 | 230 | 8.70604E-133 | – | |
| Gene3D | 204 | 417 | 214 | 5.0E-138 | – | |
| Pfam | 424 | 526 | 103 | 3.2E-37 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi1g1v0024800.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…