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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • G3DSA:1.10.287.100
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 5 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.013s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj3g3v1680410.1
n.a. PREDICTED: transcription initiation factor IIA large subunit-like [Cicer arietinum] gi|502081823|ref|XP_004486980.1| chr3 21541397 21546836 -
2 domain predictions
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Lj3g3v3235420.1
n.a. PREDICTED: transcription initiation factor IIA large subunit-like [Cicer arietinum] gi|502081823|ref|XP_004486980.1| chr3 39782673 39788263 -
2 domain predictions
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LotjaGi3g1v0286400.1
n.a. Transcription initiation factor IIA large subunit; TAIR: AT1G07470.1 Transcription factor IIA, alpha/beta subunit; Swiss-Prot: sp|Q9USU9|TOA1_SCHPO Transcription initiation factor IIA large subunit; TrEMBL-Plants: tr|A0A0B2RCP3|A0A0B2RCP3_GLYSO Transcription initiation factor IIA large subunit; Found in the gene: LotjaGi3g1v0286400 LjG1.1_chr3 57885842 57891713 -
1 domain prediction
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LotjaGi3g1v0286400.2
n.a. Transcription initiation factor IIA large subunit; TAIR: AT1G07470.1 Transcription factor IIA, alpha/beta subunit; Swiss-Prot: sp|Q9USU9|TOA1_SCHPO Transcription initiation factor IIA large subunit; TrEMBL-Plants: tr|A0A0B2RCP3|A0A0B2RCP3_GLYSO Transcription initiation factor IIA large subunit; Found in the gene: LotjaGi3g1v0286400 LjG1.1_chr3 57886164 57891554 -
1 domain prediction
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LotjaGi3g1v0490400.1
n.a. Transcription initiation factor IIA large subunit; TAIR: AT1G07480.1 Transcription factor IIA, alpha/beta subunit; Swiss-Prot: sp|Q9USU9|TOA1_SCHPO Transcription initiation factor IIA large subunit; TrEMBL-Plants: tr|V7BZ67|V7BZ67_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0490400 LjG1.1_chr3 90851729 90858908 -
1 domain prediction
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