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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR036874
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 8 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.884s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0137800.1
n.a. Carbonic anhydrase; TAIR: AT4G33580.1 beta carbonic anhydrase 5; Swiss-Prot: sp|Q94CE3|BCA5_ARATH Beta carbonic anhydrase 5, chloroplastic; TrEMBL-Plants: tr|V7B641|V7B641_PHAVU Carbonic anhydrase; Found in the gene: LotjaGi1g1v0137800 LjG1.1_chr1 22496405 22501069 +
3 domain predictions
2 GO terms
LotjaGi1g1v0180800.1
n.a. Carbonic anhydrase; TAIR: AT5G14740.1 carbonic anhydrase 2; Swiss-Prot: sp|P17067|CAHC_PEA Carbonic anhydrase, chloroplastic; TrEMBL-Plants: tr|I3S092|I3S092_LOTJA Carbonic anhydrase; Found in the gene: LotjaGi1g1v0180800 LjG1.1_chr1 35200612 35203541 +
3 domain predictions
2 GO terms
LotjaGi2g1v0245900.1
n.a. Carbonic anhydrase; TAIR: AT3G01500.2 carbonic anhydrase 1; Swiss-Prot: sp|P17067|CAHC_PEA Carbonic anhydrase, chloroplastic; TrEMBL-Plants: tr|D2DWB7|D2DWB7_PHAVU Carbonic anhydrase; Found in the gene: LotjaGi2g1v0245900 LjG1.1_chr2 71123441 71128312 +
3 domain predictions
2 GO terms
LotjaGi2g1v0245900.2
n.a. Carbonic anhydrase; TAIR: AT3G01500.2 carbonic anhydrase 1; Swiss-Prot: sp|P17067|CAHC_PEA Carbonic anhydrase, chloroplastic; TrEMBL-Plants: tr|V7BYL2|V7BYL2_PHAVU Carbonic anhydrase; Found in the gene: LotjaGi2g1v0245900 LjG1.1_chr2 71123441 71128312 +
3 domain predictions
2 GO terms
LotjaGi2g1v0256200.1
n.a. Carbonic anhydrase; TAIR: AT3G01500.1 carbonic anhydrase 1; Swiss-Prot: sp|P17067|CAHC_PEA Carbonic anhydrase, chloroplastic; TrEMBL-Plants: tr|G7KIQ9|G7KIQ9_MEDTR Carbonic anhydrase; Found in the gene: LotjaGi2g1v0256200 LjG1.1_chr2 72258928 72261322 -
3 domain predictions
2 GO terms
LotjaGi2g1v0320400.1
n.a. Carbonic anhydrase; TAIR: AT5G14740.2 carbonic anhydrase 2; Swiss-Prot: sp|P27141|CAHC_TOBAC Carbonic anhydrase, chloroplastic; TrEMBL-Plants: tr|I3T6E8|I3T6E8_LOTJA Carbonic anhydrase; Found in the gene: LotjaGi2g1v0320400 LjG1.1_chr2 79547740 79554993 -
3 domain predictions
2 GO terms
LotjaGi5g1v0092700_LC.1
n.a. Carbonic anhydrase; TAIR: AT1G58180.1 beta carbonic anhydrase 6; Swiss-Prot: sp|Q9C6F5|BCA6_ARATH Beta carbonic anhydrase 6, mitochondrial; TrEMBL-Plants: tr|I1JGZ7|I1JGZ7_SOYBN Carbonic anhydrase; Found in the gene: LotjaGi5g1v0092700_LC LjG1.1_chr5 16292091 16294283 -
3 domain predictions
2 GO terms
LotjaGi6g1v0349700.1
n.a. Carbonic anhydrase; TAIR: AT4G33580.1 beta carbonic anhydrase 5; Swiss-Prot: sp|Q94CE3|BCA5_ARATH Beta carbonic anhydrase 5, chloroplastic; TrEMBL-Plants: tr|I3T0V3|I3T0V3_LOTJA Carbonic anhydrase; Found in the gene: LotjaGi6g1v0349700 LjG1.1_chr6 66216332 66219911 +
3 domain predictions
2 GO terms