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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1467920 |
| Transcript ID | Lj2g3v1467920.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | receptor-like kinase SYMRK [Lotus japonicus] gi|21622628|gb|AAM67418.1|AF492655_1 |
| Working Lj name | LjSymRK |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 29 | 29 | – | – | |
| SignalP | 1 | 29 | 29 | – | – | |
| Phobius | 1 | 12 | 12 | – | – | |
| SignalP | 1 | 29 | 29 | – | – | |
| PANTHER | 10 | 894 | 885 | 0 | – | |
| PANTHER | 10 | 894 | 885 | 0 | – | |
| Phobius | 13 | 24 | 12 | – | – | |
| Phobius | 25 | 29 | 5 | – | – | |
| Phobius | 30 | 517 | 488 | – | – | |
| Pfam | 41 | 346 | 306 | 1.70E-47 | ||
| Pfam | 357 | 398 | 42 | 4.10E-04 | ||
| Gene3D | 364 | 486 | 123 | 7.50E-20 | ||
| SUPERFAMILY | 379 | 488 | 110 | 3.13E-19 | ||
| Pfam | 429 | 447 | 19 | 1.1 | ||
| Gene3D | 493 | 607 | 115 | 1.80E-06 | ||
| TMHMM | 518 | 540 | 23 | – | – | |
| Phobius | 518 | 541 | 24 | – | – | |
| Phobius | 542 | 923 | 382 | – | – | |
| SUPERFAMILY | 574 | 866 | 293 | 8.09E-76 | ||
| ProSiteProfiles | 594 | 871 | 278 | 37.078 | ||
| SMART | 594 | 871 | 278 | 6.70E-29 | ||
| Pfam | 598 | 866 | 269 | 4.60E-46 | ||
| ProSitePatterns | 600 | 622 | 23 | – | ||
| CDD | 600 | 867 | 268 | 1.40E-96 | – | |
| Gene3D | 608 | 671 | 64 | 1.10E-25 | – | |
| Gene3D | 672 | 866 | 195 | 9.20E-41 | – | |
| ProSitePatterns | 716 | 728 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj2g3v1467920.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1467920.1, powered by CORGI.
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