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Lj0g3v0221179.1

Overview

Field Value
Gene ID Lj0g3v0221179
Transcript ID Lj0g3v0221179.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: receptor-like serine/threonine-protein kinase ALE2-like [Glycine max] gi|356536862|ref|XP_003536952.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 5 5
SignalP 1 22 22
SignalP 1 22 22
Phobius 1 22 22
Phobius 6 17 12
TMHMM 10 32 23
Phobius 18 22 5
Phobius 23 255 233
PANTHER 103 110 8 8.70E-280
PANTHER 103 110 8 8.70E-280
PANTHER 211 303 93 8.70E-280
PANTHER 211 303 93 8.70E-280
Gene3D 246 352 107 2.10E-12
TMHMM 256 278 23
Phobius 256 278 23
Phobius 279 736 458
SUPERFAMILY 325 619 295 6.42E-79
PANTHER 330 655 326 8.70E-280
PANTHER 330 655 326 8.70E-280
ProSiteProfiles 346 621 276 37.319
Pfam 348 618 271 4.00E-48
CDD 352 621 270 3.29E-96
ProSitePatterns 352 374 23
Gene3D 353 407 55 5.10E-24
Gene3D 408 625 218 4.50E-42
ProSitePatterns 468 480 13

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.

Expression data

Expression pattern

Expression pattern of Lj0g3v0221179.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0221179.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.