Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj1g3v3023720.1

Overview

Field Value
Gene ID Lj1g3v3023720
Transcript ID Lj1g3v3023720.1
Lotus japonicus genome version MG20 v3.0
Description leucine-rich repeat receptor-like kinase [Lotus japonicus] gi|353677868|dbj|BAL04590.1|
Working Lj name LjKlavier

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SignalP 1 33 33
Phobius 1 36 36
SignalP 1 36 36
Phobius 1 15 15
PANTHER 14 94 81 0
PANTHER 14 94 81 0
Phobius 16 27 12
Phobius 28 36 9
Phobius 37 798 762
Pfam 39 79 41 8.70E-09
Gene3D 39 338 300 1.40E-64
PANTHER 127 332 206 0
PANTHER 127 332 206 0
SUPERFAMILY 132 249 118 4.31E-25
SMART 162 185 24 140
SMART 186 210 25 31
Pfam 188 209 22 1.4
SMART 231 255 25 250
SUPERFAMILY 233 338 106 3.06E-54
SMART 256 280 25 250
Pfam 258 280 23 0.021
SMART 304 328 25 29
Gene3D 365 473 109 2.80E-21
PANTHER 366 474 109 0
PANTHER 366 474 109 0
SUPERFAMILY 366 463 98 3.06E-54
Gene3D 553 735 183 5.50E-47
SUPERFAMILY 557 735 179 3.06E-54
PANTHER 565 747 183 0
PANTHER 565 747 183 0
SMART 619 643 25 37
Pfam 621 679 59 4.50E-07
SMART 667 690 24 39
SMART 691 714 24 110
PANTHER 778 1129 352 0
PANTHER 778 1129 352 0
Gene3D 780 862 83 2.50E-07
TMHMM 796 818 23
Phobius 799 818 20
Phobius 819 1137 319
SUPERFAMILY 840 1129 290 6.20E-74
SMART 858 1136 279 1.30E-34
ProSiteProfiles 858 1132 275 39.241
Pfam 861 1126 266 1.80E-44
Gene3D 863 941 79 7.00E-22
ProSitePatterns 864 886 23
CDD 864 1132 269 4.64E-85
Gene3D 942 1133 192 2.30E-40
ProSitePatterns 978 990 13

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.

LORE1 insertions 17

Expression data

Expression pattern

Expression pattern of Lj1g3v3023720.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v3023720.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.