Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
No description is available for this domain.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Structural constituent of ribosome | The action of a molecule that contributes to the structural integrity of the ribosome. | ||
| Cellular component | Ribosome | An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins. | ||
| Biological process | Translation | The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Ribosomal protein S11 [Lotus japonicus] gi|13518471|ref|NP_084830.1| | 12 | ||
| – | PREDICTED: 30S ribosomal protein S11-like [Cicer arietinum] gi|502090453|ref|XP_004489233.1| | 8 | ||
| – | PREDICTED: 40S ribosomal protein S14-like [Brachypodium distachyon] gi|357150019|ref|XP_003575312.1| | 11 | ||
| – | PREDICTED: 40S ribosomal protein S14-like [Brachypodium distachyon] gi|357150019|ref|XP_003575312.1| | 11 | ||
| – | 40S ribosomal protein S14 [Medicago truncatula] gi|357476431|ref|XP_003608501.1| | 6 | ||
| – | 30S ribosomal protein S11; TAIR: AT1G31817.1 Ribosomal L18p/L5e family protein; Swiss-Prot: sp|Q8VZT8|RT11_ARATH Probable ribosomal protein S11, mitochondrial; TrEMBL-Plants: tr|I3SBQ1|I3SBQ1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0158600 | 15 | ||
| – | 30S ribosomal protein S11; TAIR: AT1G31817.1 Ribosomal L18p/L5e family protein; Swiss-Prot: sp|Q8VZT8|RT11_ARATH Probable ribosomal protein S11, mitochondrial; TrEMBL-Plants: tr|I1L3J2|I1L3J2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0158600 | 15 | ||
| – | 30S ribosomal protein S11; TAIR: AT1G31817.1 Ribosomal L18p/L5e family protein; Swiss-Prot: sp|Q8VZT8|RT11_ARATH Probable ribosomal protein S11, mitochondrial; TrEMBL-Plants: tr|I3SBQ1|I3SBQ1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0158600 | 15 | ||
| – | 30S ribosomal protein S11; TAIR: AT1G31817.1 Ribosomal L18p/L5e family protein; Swiss-Prot: sp|Q8VZT8|RT11_ARATH Probable ribosomal protein S11, mitochondrial; TrEMBL-Plants: tr|I1L3J2|I1L3J2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0158600 | 15 | ||
| – | 30S ribosomal protein S11; TAIR: AT1G31817.1 Ribosomal L18p/L5e family protein; Swiss-Prot: sp|Q8VZT8|RT11_ARATH Probable ribosomal protein S11, mitochondrial; TrEMBL-Plants: tr|I1L3J2|I1L3J2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0158600 | 15 | ||
| – | 50S ribosomal L18; TAIR: AT1G08845.2 Ribosomal L18p/L5e family protein; Swiss-Prot: sp|Q1MIC5|RL18_RHIL3 50S ribosomal protein L18; TrEMBL-Plants: tr|A0A0I9RJ76|A0A0I9RJ76_LOTJA L18 ribosomal protein Heart Stopper; Found in the gene: LotjaGi3g1v0105800 | 8 | ||
| – | 50S ribosomal L18; TAIR: AT1G08845.2 Ribosomal L18p/L5e family protein; Swiss-Prot: sp|Q1MIC5|RL18_RHIL3 50S ribosomal protein L18; TrEMBL-Plants: tr|A0A0I9RJ76|A0A0I9RJ76_LOTJA L18 ribosomal protein Heart Stopper; Found in the gene: LotjaGi3g1v0105800 | 8 | ||
| – | 30S ribosomal protein S11; TAIR: AT3G52580.1 Ribosomal protein S11 family protein; Swiss-Prot: sp|O22584|RS14_LUPLU 40S ribosomal protein S14; TrEMBL-Plants: tr|I3SUQ0|I3SUQ0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0022900 | 12 | ||
| – | 50S ribosomal L18; TAIR: AT1G08845.2 Ribosomal L18p/L5e family protein; Swiss-Prot: sp|Q1MIC5|RL18_RHIL3 50S ribosomal protein L18; TrEMBL-Plants: tr|A0A0I9QQ14|A0A0I9QQ14_MEDSA L18 ribosomal protein Heart Stopper; Found in the gene: LotjaGi4g1v0153400 | 8 | ||
| – | 30S ribosomal protein S11; TAIR: AT3G52580.1 Ribosomal protein S11 family protein; Swiss-Prot: sp|O22584|RS14_LUPLU 40S ribosomal protein S14; TrEMBL-Plants: tr|I3S2A7|I3S2A7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0308300 | 12 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 6.67 |