Domain Predictions — View

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G3DSA:3.40.50.11380

Source: Gene3D

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 8

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi5g1v0099700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Photosystem I assembly protein Ycf3; TAIR: AT3G11540.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp\|O82039\|SPY_PETHY Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; TrEMBL-Plants: tr\|A0A151U3N8\|A0A151U3N8_CAJCA Putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; Found in the gene: LotjaGi5g1v0099700	Domains G3DSA:1.25.40.10 G3DSA:3.40.50.11380 G3DSA:3.40.50.2000 IPR001440 IPR006597 IPR011990 IPR013026 IPR019734 IPR029489 PF00515 PF13181 PF13424 PF13844 PS50005 PS50293 PTHR44835 PTHR44835:SF1 SM00028 SM00671 SSF48452 mobidb-lite	21
LotjaGi5g1v0099700.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Photosystem I assembly protein Ycf3; TAIR: AT3G11540.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp\|O82039\|SPY_PETHY Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; TrEMBL-Plants: tr\|A0A151U3N8\|A0A151U3N8_CAJCA Putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; Found in the gene: LotjaGi5g1v0099700	Domains G3DSA:1.25.40.10 G3DSA:3.40.50.11380 G3DSA:3.40.50.2000 IPR001440 IPR006597 IPR011990 IPR013026 IPR019734 IPR029489 PF00515 PF13181 PF13424 PF13844 PS50005 PS50293 PTHR44835 PTHR44835:SF1 SM00028 SM00671 SSF48452	20
LotjaGi5g1v0099700.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Photosystem I assembly protein Ycf3; TAIR: AT3G11540.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp\|O82039\|SPY_PETHY Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; TrEMBL-Plants: tr\|A0A151U3N8\|A0A151U3N8_CAJCA Putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; Found in the gene: LotjaGi5g1v0099700	Domains G3DSA:1.25.40.10 G3DSA:3.40.50.11380 G3DSA:3.40.50.2000 IPR001440 IPR006597 IPR011990 IPR013026 IPR019734 IPR029489 PF00515 PF13181 PF13424 PF13844 PS50005 PS50293 PTHR44835 PTHR44835:SF1 SM00028 SM00671 SSF48452 mobidb-lite	21
LotjaGi5g1v0205100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Tetratricopeptide repeat (TPR)-like superfamily protein; TAIR: AT3G04240.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp\|Q9M8Y0\|SEC_ARATH Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; TrEMBL-Plants: tr\|G7I5N5\|G7I5N5_MEDTR Peptide-N-acetylglucosaminyltransferase; Found in the gene: LotjaGi5g1v0205100	Domains G3DSA:1.25.40.10 G3DSA:3.30.720.150 G3DSA:3.40.50.11380 G3DSA:3.40.50.2000 IPR001440 IPR011990 IPR013026 IPR013105 IPR019734 IPR029489 IPR037919 PF00515 PF07719 PF13181 PF13414 PF13844 PS50005 PS50293 PTHR44366 PTHR44366:SF2 SM00028 SSF48452 mobidb-lite	23
LotjaGi5g1v0205100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Tetratricopeptide repeat (TPR)-containing protein; TAIR: AT3G04240.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp\|Q9M8Y0\|SEC_ARATH Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; TrEMBL-Plants: tr\|G7I5N5\|G7I5N5_MEDTR Peptide-N-acetylglucosaminyltransferase; Found in the gene: LotjaGi5g1v0205100	Domains G3DSA:1.25.40.10 G3DSA:3.40.50.11380 G3DSA:3.40.50.2000 IPR011990 IPR013026 IPR013105 IPR019734 IPR029489 IPR037919 PF07719 PF13414 PF13844 PS50005 PS50293 PTHR44366 PTHR44366:SF2 SM00028 SSF48452	18
LotjaGi5g1v0205100.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Tetratricopeptide repeat (TPR)-like superfamily protein; TAIR: AT3G04240.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp\|Q9M8Y0\|SEC_ARATH Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; TrEMBL-Plants: tr\|G7I5N5\|G7I5N5_MEDTR Peptide-N-acetylglucosaminyltransferase; Found in the gene: LotjaGi5g1v0205100	Domains G3DSA:1.25.40.10 G3DSA:3.30.720.150 G3DSA:3.40.50.11380 G3DSA:3.40.50.2000 IPR001440 IPR011990 IPR013026 IPR013105 IPR019734 IPR029489 IPR037919 PF00515 PF07719 PF13181 PF13414 PF13844 PS50005 PS50293 PTHR44366 PTHR44366:SF2 SM00028 SSF48452	22
LotjaGi5g1v0205100.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Tetratricopeptide repeat (TPR)-like superfamily protein; TAIR: AT3G04240.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp\|Q9M8Y0\|SEC_ARATH Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; TrEMBL-Plants: tr\|G7I5N5\|G7I5N5_MEDTR Peptide-N-acetylglucosaminyltransferase; Found in the gene: LotjaGi5g1v0205100	Domains G3DSA:1.25.40.10 G3DSA:3.30.720.150 G3DSA:3.40.50.11380 G3DSA:3.40.50.2000 IPR001440 IPR011990 IPR013026 IPR013105 IPR019734 IPR029489 IPR037919 PF00515 PF07719 PF13181 PF13414 PF13844 PS50005 PS50293 PTHR44366 PTHR44366:SF2 SM00028 SSF48452	22
LotjaGi5g1v0205100.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Tetratricopeptide repeat (TPR)-like superfamily protein; TAIR: AT3G04240.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp\|Q9M8Y0\|SEC_ARATH Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; TrEMBL-Plants: tr\|G7I5N5\|G7I5N5_MEDTR Peptide-N-acetylglucosaminyltransferase; Found in the gene: LotjaGi5g1v0205100	Domains G3DSA:1.25.40.10 G3DSA:3.30.720.150 G3DSA:3.40.50.11380 G3DSA:3.40.50.2000 IPR001440 IPR011990 IPR013026 IPR013105 IPR019734 IPR029489 IPR037919 PF00515 PF07719 PF13181 PF13414 PF13844 PS50005 PS50293 PTHR44366 PTHR44366:SF2 SM00028 SSF48452	22

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
SSF48452	SUPERFAMILY	1	12.50