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IPR013105 is a Tetratricopeptide repeat 2.
<p>The tetratrico peptide repeat (TPR) is a structural motif present in a wide range of proteins [[cite:PUB00005443], [cite:PUB00001313], [cite:PUB00005695]]. It mediates protein-protein interactions and the assembly of multiprotein complexes [[cite:PUB00014195]]. The TPR motif consists of 3-16 tandem-repeats of 34 amino acids residues, although individual TPR motifs can be dispersed in the protein sequence. Sequence alignment of the TPR domains reveals a consensus sequence defined by a pattern of small and large amino acids. TPR motifs have been identified in various different organisms, ranging from bacteria to humans. Proteins containing TPRs are involved in a variety of biological processes, such as cell cycle regulation, transcriptional control, mitochondrial and peroxisomal protein transport, neurogenesis and protein folding [[cite:PUB00094363]].</p> <p>This repeat includes outlying Tetratricopeptide-like repeats (TPR) that are not matched by [interpro:IPR019734].</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: tetratricopeptide repeat protein 13-like [Glycine max] gi|356565517|ref|XP_003550986.1| | 17 | ||
| – | PREDICTED: tetratricopeptide repeat protein 37-like isoform X1 [Cicer arietinum] gi|502158779|ref|XP_004511280.1| | 17 | ||
| – | PREDICTED: tetratricopeptide repeat protein 37-like isoform X1 [Cicer arietinum] gi|502158779|ref|XP_004511280.1| | 13 | ||
| – | PREDICTED: tetratricopeptide repeat protein 37-like isoform X1 [Cicer arietinum] gi|502158779|ref|XP_004511280.1| | 17 | ||
| – | PREDICTED: tetratricopeptide repeat protein 27 homolog [Cicer arietinum] gi|502137243|ref|XP_004503019.1| | 17 | ||
| – | PREDICTED: dnaJ homolog subfamily C member 3 homolog [Glycine max] gi|356572429|ref|XP_003554371.1| | 28 | ||
| – | PREDICTED: RNA polymerase II-associated protein 3-like [Glycine max] gi|356537369|ref|XP_003537200.1| | 14 | ||
| – | Tetratricopeptide repeat protein 27; TAIR: AT5G17270.1 Protein prenylyltransferase superfamily protein; Swiss-Prot: sp|Q54BW6|TTC27_DICDI Tetratricopeptide repeat protein 27 homolog; TrEMBL-Plants: tr|G7J2N4|G7J2N4_MEDTR Protein prenylyltransferase superfamily protein; Found in the gene: LotjaGi1g1v0329900 | 17 | ||
| – | Chaperone protein dnaJ, putative; TAIR: AT5G03160.1 DnaJ P58IPK-like protein; Swiss-Prot: sp|Q9LYW9|DNJ36_ARATH DnaJ protein P58IPK homolog; TrEMBL-Plants: tr|A0A151TUX5|A0A151TUX5_CAJCA DnaJ isogeny subfamily C member 3 isogeny; Found in the gene: LotjaGi1g1v0692000 | 28 | ||
| – | Photosystem I assembly protein ycf3; TAIR: AT1G02910.1 tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|Q9SRY4|LPA1_ARATH Protein LOW PSII ACCUMULATION 1, chloroplastic; TrEMBL-Plants: tr|V7CY17|V7CY17_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0766300 | 18 | ||
| – | Glutamyl-tRNA(Gln) amidotransferase subunit A; TAIR: AT3G17970.1 translocon at the outer membrane of chloroplasts 64-III; Swiss-Prot: sp|Q9MUK5|TOC64_PEA Translocon at the outer membrane of chloroplasts 64; TrEMBL-Plants: tr|G7LE58|G7LE58_MEDTR Translocon at the outer membrane ofs-like protein; Found in the gene: LotjaGi2g1v0197000 | 20 | ||
| – | Tetratricopeptide repeat-containing protein; TAIR: AT1G76630.2 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|F4I3Z5|SKI3_ARATH Tetratricopeptide repeat protein SKI3; TrEMBL-Plants: tr|K7K5N8|K7K5N8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0462200 | 13 | ||
| – | Tetratricopeptide repeat-containing protein; TAIR: AT1G76630.2 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|F4I3Z5|SKI3_ARATH Tetratricopeptide repeat protein SKI3; TrEMBL-Plants: tr|K7K5N9|K7K5N9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0462200 | 14 | ||
| – | Tetratricopeptide repeat-containing protein; TAIR: AT1G76630.2 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|F4I3Z5|SKI3_ARATH Tetratricopeptide repeat protein SKI3; TrEMBL-Plants: tr|K7K5N9|K7K5N9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0462200 | 13 | ||
| – | Tetratricopeptide repeat protein 13; TAIR: AT4G37460.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|F4JS25|SRFR1_ARATH Suppressor of RPS4-RLD 1; TrEMBL-Plants: tr|I1MVQ3|I1MVQ3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0098200 | 15 | ||
| – | Tetratricopeptide repeat (TPR)-like superfamily protein; TAIR: AT3G04240.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q9M8Y0|SEC_ARATH Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; TrEMBL-Plants: tr|G7I5N5|G7I5N5_MEDTR Peptide-N-acetylglucosaminyltransferase; Found in the gene: LotjaGi5g1v0205100 | 23 | ||
| – | Tetratricopeptide repeat (TPR)-containing protein; TAIR: AT3G04240.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q9M8Y0|SEC_ARATH Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; TrEMBL-Plants: tr|G7I5N5|G7I5N5_MEDTR Peptide-N-acetylglucosaminyltransferase; Found in the gene: LotjaGi5g1v0205100 | 18 | ||
| – | Tetratricopeptide repeat (TPR)-like superfamily protein; TAIR: AT3G04240.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q9M8Y0|SEC_ARATH Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; TrEMBL-Plants: tr|G7I5N5|G7I5N5_MEDTR Peptide-N-acetylglucosaminyltransferase; Found in the gene: LotjaGi5g1v0205100 | 22 | ||
| – | Tetratricopeptide repeat (TPR)-like superfamily protein; TAIR: AT3G04240.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q9M8Y0|SEC_ARATH Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; TrEMBL-Plants: tr|G7I5N5|G7I5N5_MEDTR Peptide-N-acetylglucosaminyltransferase; Found in the gene: LotjaGi5g1v0205100 | 22 | ||
| – | Tetratricopeptide repeat (TPR)-like superfamily protein; TAIR: AT3G04240.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q9M8Y0|SEC_ARATH Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; TrEMBL-Plants: tr|G7I5N5|G7I5N5_MEDTR Peptide-N-acetylglucosaminyltransferase; Found in the gene: LotjaGi5g1v0205100 | 22 | ||
| – | Tetratricopeptide repeat-containing family protein; TAIR: AT1G04190.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q5XEP2|HSOP2_ARATH Hsp70-Hsp90 organizing protein 2; TrEMBL-Plants: tr|A0A151U2M8|A0A151U2M8_CAJCA Heat shock protein STI; Found in the gene: LotjaGi6g1v0002900 | 14 | ||
| – | Tetratricopeptide repeat-containing family protein; TAIR: AT1G04190.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q5XEP2|HSOP2_ARATH Hsp70-Hsp90 organizing protein 2; TrEMBL-Plants: tr|A0A151U2M8|A0A151U2M8_CAJCA Heat shock protein STI; Found in the gene: LotjaGi6g1v0002900 | 14 | ||
| – | Tetratricopeptide repeat-containing family protein; TAIR: AT1G04190.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q5XEP2|HSOP2_ARATH Hsp70-Hsp90 organizing protein 2; TrEMBL-Plants: tr|A0A151U2M8|A0A151U2M8_CAJCA Heat shock protein STI; Found in the gene: LotjaGi6g1v0002900 | 14 | ||
| – | TPR repeat-containing thioredoxin TTL1-like protein; TAIR: AT5G65160.1 tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|Q9SIN1|TTL3_ARATH Inactive TPR repeat-containing thioredoxin TTL3; TrEMBL-Plants: tr|G7J3U4|G7J3U4_MEDTR Inactive TPR repeat thioredoxin TTL3-like protein; Found in the gene: LotjaGi6g1v0086600 | 17 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 4.17 |