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IPR002676 is a RimM, N-terminal.
<p>The RimM protein is essential for efficient processing of 16S rRNA [[cite:PUB00002319]]. It was shown to have affinity for free ribosomal 30S subunits but not for 30S subunits in the 70S ribosomes [[cite:PUB00002319]]. RimM contains a characteristic N-terminal domain and a PRC-barrel C-terminal domain, linked by an unstructured region [[cite:PUB00047259]]. The N-terminal domain folds into a closed β-barrel structure.</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | RRNA processing | Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Ribosome maturation factor rimM; TAIR: AT5G46420.1 16S rRNA processing protein RimM family; Swiss-Prot: sp|A5GI62|RIMM_SYNPW Ribosome maturation factor RimM; TrEMBL-Plants: tr|G7L811|G7L811_MEDTR 16S rRNA processing protein RimM; Found in the gene: LotjaGi4g1v0383200 | 22 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 100.00 |