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IPR006263

Source: InterPro

Description

IPR006263 is a Cytidine deaminase, homodimeric.

<p>This family represents the homodimeric form of cytidine deaminase, a zinc metalloprotein found in Escherichia coli [[cite:PUB00009543]] and in Arabidopsis thaliana (Mouse-ear cress). A related, homotetrameric form with a much smaller subunit is found most bacteria and in animals, [interpro:IPR006262]. Both types may act on deoxycytidine as well as cytidine.</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004126
Molecular function Cytidine deaminase activity Catalysis of the reaction: cytidine + H2O = uridine + NH3.
Subterm of
GO:0008270
Molecular function Zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.
Subterm of
GO:0009972
Biological process Cytidine deamination The removal of amino group in the presence of water.
Subterm of

Associated Lotus transcripts 3

Transcript Name Description Predicted domains Domain count
Lj2g3v0912020.1
– Cytidine deaminase [Medicago truncatula] gi|357501295|ref|XP_003620936.1|
Domains
16
Lj4g3v3015270.1
– Cytidine deaminase [Medicago truncatula] gi|357520685|ref|XP_003630631.1|
Domains
17
LotjaGi2g1v0233100.1
– Cytidine deaminase; TAIR: AT2G19570.1 cytidine deaminase 1; Swiss-Prot: sp|O65896|CDA1_ARATH Cytidine deaminase 1; TrEMBL-Plants: tr|A0A1J7HS04|A0A1J7HS04_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0233100
Domains
16

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd01283 CDD 1 33.33