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IPR017440 is a ATP-citrate lyase/succinyl-CoA ligase, active site.
<p>There are four different enzymes that share a similar catalytic mechanism which involves the phosphorylation by ATP (or GTP) of a specific histidine residue in the active site. These enzymes are: ATP citrate-lyase ([ec:4.1.3.8]) [[cite:PUB00001411]], the primary enzyme responsible for the synthesis of cytosolic acetyl-CoA in many tissues, catalyzes the formation of acetyl-CoA and oxaloacetate from citrate and CoA with the concomitant hydrolysis of ATP to ADP and phosphate. ATP-citrate lyase is a tetramer of identical subunits; Succinyl-CoA ligase (GDP-forming) ([ec:6.2.1.4]) [[cite:PUB00005004]] is a mitochondrial enzyme that catalyzes the substrate level phosphorylation step of the tricarboxylic acid cycle: the formation of succinyl-CoA from succinate with a concomitant hydrolysis of GTP to GDP and phosphate. This enzyme is a dimer composed of an alpha and a beta subunits; Succinyl-CoA ligase (ADP-forming) ([ec:6.2.1.5]) [[cite:PUB00000280]] is a bacterial enzyme that during aerobic metabolism functions in the citric acid cycle, coupling the hydrolysis of succinyl-CoA to the synthesis of ATP. It can also function in the other direction for anabolic purposes. This enzyme is a tetramer composed of two alpha and two beta subunits; and Malate-CoA ligase ([ec:6.2.1.9]) (malyl-CoA synthetase) [[cite:PUB00002257]], is a bacterial enzyme that forms malyl-CoA from malate and CoA with the concomitant hydrolysis of ATP to ADP and phosphate. Malate-CoA ligase is composed of two different subunits.</p> <p>This pattern, which is located some 50 residues to the C-terminal of [interpro:IPR005810], includes the active site phosphorylated histidine residue.</p>
This description is obtained from EB-eye REST.
Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | Succinyl-CoA ligase alpha 1 subunit-like [Solanum tuberosum] gi|78191458|gb|ABB29950.1| | 18 | ||
– | PREDICTED: probable succinyl-CoA ligase [ADP]-forming] gi|502173227|ref|XP_004515280.1| | 21 | ||
– | PREDICTED: ATP-citrate synthase beta chain protein 1-like [Glycine max] gi|356556001|ref|XP_003546316.1| | 23 | ||
– | ATP citrate lyase alpha subunit [Glycyrrhiza uralensis] gi|148872938|gb|ABR15094.1| | 25 | ||
– | PREDICTED: ATP-citrate synthase beta chain protein 1-like [Glycine max] gi|356556001|ref|XP_003546316.1| | 23 | ||
– | Succinate--CoA ligase [ADP]-forming] subunit alpha; TAIR: AT5G23250.1 Succinyl-CoA ligase, alpha subunit; Swiss-Prot: sp|Q8GTQ9|SUCA1_SOLLC Succinate--CoA ligase [ADP]-forming] subunit alpha-1, mitochondrial; TrEMBL-Plants: tr|V7C6K2|V7C6K2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0179800 | 22 | ||
– | ATP-citrate synthase, putative; TAIR: AT3G06650.1 ATP-citrate lyase B-1; Swiss-Prot: sp|Q93VT8|ACLB1_ORYSJ ATP-citrate synthase beta chain protein 1; TrEMBL-Plants: tr|A6MZ92|A6MZ92_GLYUR ATP citrate lyase alpha subunit; Found in the gene: LotjaGi4g1v0331500 | 24 | ||
– | ATP-citrate synthase, putative; TAIR: AT3G06650.1 ATP-citrate lyase B-1; Swiss-Prot: sp|Q93VT8|ACLB1_ORYSJ ATP-citrate synthase beta chain protein 1; TrEMBL-Plants: tr|A6MZ92|A6MZ92_GLYUR ATP citrate lyase alpha subunit; Found in the gene: LotjaGi4g1v0331500 | 24 | ||
– | ATP-citrate synthase, putative; TAIR: AT3G06650.1 ATP-citrate lyase B-1; Swiss-Prot: sp|Q93VT8|ACLB1_ORYSJ ATP-citrate synthase beta chain protein 1; TrEMBL-Plants: tr|A6MZ92|A6MZ92_GLYUR ATP citrate lyase alpha subunit; Found in the gene: LotjaGi4g1v0331500 | 24 | ||
– | ATP-citrate synthase, putative; TAIR: AT3G06650.1 ATP-citrate lyase B-1; Swiss-Prot: sp|Q93VT8|ACLB1_ORYSJ ATP-citrate synthase beta chain protein 1; TrEMBL-Plants: tr|V7BMZ5|V7BMZ5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0258800 | 24 | ||
– | ATP-citrate synthase, putative; TAIR: AT3G06650.1 ATP-citrate lyase B-1; Swiss-Prot: sp|Q93VT8|ACLB1_ORYSJ ATP-citrate synthase beta chain protein 1; TrEMBL-Plants: tr|V7BMZ5|V7BMZ5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0258800 | 24 | ||
– | ATP-citrate synthase, putative; TAIR: AT3G06650.1 ATP-citrate lyase B-1; Swiss-Prot: sp|Q93VT8|ACLB1_ORYSJ ATP-citrate synthase beta chain protein 1; TrEMBL-Plants: tr|V7BMZ5|V7BMZ5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0258800 | 24 | ||
– | ATP-citrate synthase, putative; TAIR: AT3G06650.1 ATP-citrate lyase B-1; Swiss-Prot: sp|Q93VT8|ACLB1_ORYSJ ATP-citrate synthase beta chain protein 1; TrEMBL-Plants: tr|V7BMZ5|V7BMZ5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0258800 | 24 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
cd06100 | CDD | 1 | 7.69 |