Domain Predictions — View

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PS01217

Source: ProSitePatterns

Description

ATP-citrate lyase / succinyl-CoA ligases family signature 3.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 14

Transcript	Name	Description	Predicted domains	Domain count
Lj4g3v2265020.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: ATP-citrate synthase beta chain protein 1-like [Glycine max] gi\|356556001\|ref\|XP_003546316.1\|	Domains G3DSA:1.10.230.10 G3DSA:1.10.580.10 G3DSA:3.40.50.261 G3DSA:3.40.50.720 IPR002020 IPR005811 IPR016040 IPR016102 IPR016142 IPR016143 IPR017440 IPR017866 IPR033847 PF00285 PF00549 PS00399 PS01216 PS01217 PTHR23118 PTHR23118:SF3 SSF48256 SSF51735 cd06100	23
Lj4g3v2266260.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP citrate lyase alpha subunit [Glycyrrhiza uralensis] gi\|148872938\|gb\|ABR15094.1\|	Domains G3DSA:1.10.230.10 G3DSA:1.10.580.10 G3DSA:3.40.50.261 G3DSA:3.40.50.720 IPR002020 IPR004265 IPR005811 IPR016040 IPR016102 IPR016142 IPR016143 IPR017440 IPR017866 IPR033847 PF00285 PF00549 PF03018 PS00399 PS01216 PS01217 PTHR23118 PTHR23118:SF3 SSF48256 SSF51735 cd06100	25
Lj5g3v1118370.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Succinyl-CoA ligase beta subunit [Caragana jubata] gi\|146215968\|gb\|ABQ10186.1\|	Domains G3DSA:3.30.1490.20 G3DSA:3.30.470.20 G3DSA:3.40.50.261 IPR005809 IPR005811 IPR011761 IPR013650 IPR013815 IPR013816 IPR016102 IPR017866 PF00549 PF08442 PIRSF001554 PS01217 PS50975 PTHR11815 PTHR11815:SF1 SSF52210 SSF56059 TIGR01016	21
Lj6g3v1915820.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: ATP-citrate synthase beta chain protein 1-like [Glycine max] gi\|356556001\|ref\|XP_003546316.1\|	Domains G3DSA:1.10.230.10 G3DSA:1.10.580.10 G3DSA:3.40.50.261 G3DSA:3.40.50.720 IPR002020 IPR005811 IPR016040 IPR016102 IPR016142 IPR016143 IPR017440 IPR017866 IPR033847 PF00285 PF00549 PS00399 PS01216 PS01217 PTHR23118 PTHR23118:SF3 SSF48256 SSF51735 cd06100	23
LotjaGi4g1v0331500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-citrate synthase, putative; TAIR: AT3G06650.1 ATP-citrate lyase B-1; Swiss-Prot: sp\|Q93VT8\|ACLB1_ORYSJ ATP-citrate synthase beta chain protein 1; TrEMBL-Plants: tr\|A6MZ92\|A6MZ92_GLYUR ATP citrate lyase alpha subunit; Found in the gene: LotjaGi4g1v0331500	Domains G3DSA:1.10.230.10 G3DSA:1.10.580.10 G3DSA:3.40.50.261 G3DSA:3.40.50.720 IPR002020 IPR005811 IPR016102 IPR016142 IPR016143 IPR017440 IPR017866 IPR033847 IPR036291 IPR036969 PF00285 PF00549 PS00399 PS01216 PS01217 PTHR23118 PTHR23118:SF28 SSF48256 SSF51735 cd06100	24
LotjaGi4g1v0331500.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-citrate synthase, putative; TAIR: AT3G06650.1 ATP-citrate lyase B-1; Swiss-Prot: sp\|Q93VT8\|ACLB1_ORYSJ ATP-citrate synthase beta chain protein 1; TrEMBL-Plants: tr\|A6MZ92\|A6MZ92_GLYUR ATP citrate lyase alpha subunit; Found in the gene: LotjaGi4g1v0331500	Domains G3DSA:1.10.230.10 G3DSA:1.10.580.10 G3DSA:3.40.50.261 G3DSA:3.40.50.720 IPR002020 IPR005811 IPR016102 IPR016142 IPR016143 IPR017440 IPR017866 IPR033847 IPR036291 IPR036969 PF00285 PF00549 PS00399 PS01216 PS01217 PTHR23118 PTHR23118:SF28 SSF48256 SSF51735 cd06100	24
LotjaGi4g1v0331500.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-citrate synthase, putative; TAIR: AT3G06650.1 ATP-citrate lyase B-1; Swiss-Prot: sp\|Q93VT8\|ACLB1_ORYSJ ATP-citrate synthase beta chain protein 1; TrEMBL-Plants: tr\|A6MZ92\|A6MZ92_GLYUR ATP citrate lyase alpha subunit; Found in the gene: LotjaGi4g1v0331500	Domains G3DSA:1.10.230.10 G3DSA:3.40.50.261 G3DSA:3.40.50.720 IPR002020 IPR005811 IPR016102 IPR016143 IPR017866 IPR033847 IPR036291 IPR036969 PF00285 PF00549 PS01216 PS01217 PTHR23118 PTHR23118:SF28 SSF48256 SSF51735 cd06100	20
LotjaGi4g1v0331500.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-citrate synthase, putative; TAIR: AT3G06650.1 ATP-citrate lyase B-1; Swiss-Prot: sp\|Q93VT8\|ACLB1_ORYSJ ATP-citrate synthase beta chain protein 1; TrEMBL-Plants: tr\|A6MZ92\|A6MZ92_GLYUR ATP citrate lyase alpha subunit; Found in the gene: LotjaGi4g1v0331500	Domains G3DSA:1.10.230.10 G3DSA:1.10.580.10 G3DSA:3.40.50.261 G3DSA:3.40.50.720 IPR002020 IPR005811 IPR016102 IPR016142 IPR016143 IPR017440 IPR017866 IPR033847 IPR036291 IPR036969 PF00285 PF00549 PS00399 PS01216 PS01217 PTHR23118 PTHR23118:SF28 SSF48256 SSF51735 cd06100	24
LotjaGi5g1v0154600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Succinate--CoA ligase [ADP]-forming] subunit beta; TAIR: AT2G20420.1 ATP citrate lyase (ACL) family protein; Swiss-Prot: sp\|O82662\|SUCB_ARATH Succinate--CoA ligase [ADP]-forming] subunit beta, mitochondrial; TrEMBL-Plants: tr\|A5HIG2\|A5HIG2_9FABA Succinate-CoA ligase subunit beta; Found in the gene: LotjaGi5g1v0154600	Domains G3DSA:3.30.1490.20 G3DSA:3.30.470.20 G3DSA:3.40.50.261 IPR005809 IPR005811 IPR011761 IPR013650 IPR013815 IPR016102 IPR017866 MF_00558 PF00549 PF08442 PIRSF001554 PS01217 PS50975 PTHR11815 PTHR11815:SF10 SSF52210 SSF56059 TIGR01016	21
LotjaGi6g1v0258800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-citrate synthase, putative; TAIR: AT3G06650.1 ATP-citrate lyase B-1; Swiss-Prot: sp\|Q93VT8\|ACLB1_ORYSJ ATP-citrate synthase beta chain protein 1; TrEMBL-Plants: tr\|V7BMZ5\|V7BMZ5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0258800	Domains G3DSA:1.10.230.10 G3DSA:1.10.580.10 G3DSA:3.40.50.261 G3DSA:3.40.50.720 IPR002020 IPR005811 IPR016102 IPR016142 IPR016143 IPR017440 IPR017866 IPR033847 IPR036291 IPR036969 PF00285 PF00549 PS00399 PS01216 PS01217 PTHR23118 PTHR23118:SF24 SSF48256 SSF51735 cd06100	24
LotjaGi6g1v0258800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-citrate synthase, putative; TAIR: AT3G06650.1 ATP-citrate lyase B-1; Swiss-Prot: sp\|Q93VT8\|ACLB1_ORYSJ ATP-citrate synthase beta chain protein 1; TrEMBL-Plants: tr\|V7BMZ5\|V7BMZ5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0258800	Domains G3DSA:1.10.230.10 G3DSA:1.10.580.10 G3DSA:3.40.50.261 G3DSA:3.40.50.720 IPR002020 IPR005811 IPR016102 IPR016142 IPR016143 IPR017440 IPR017866 IPR033847 IPR036291 IPR036969 PF00285 PF00549 PS00399 PS01216 PS01217 PTHR23118 PTHR23118:SF24 SSF48256 SSF51735 cd06100	24
LotjaGi6g1v0258800.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-citrate synthase, putative; TAIR: AT3G06650.1 ATP-citrate lyase B-1; Swiss-Prot: sp\|Q93VT8\|ACLB1_ORYSJ ATP-citrate synthase beta chain protein 1; TrEMBL-Plants: tr\|V7BMZ5\|V7BMZ5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0258800	Domains G3DSA:1.10.230.10 G3DSA:1.10.580.10 G3DSA:3.40.50.261 G3DSA:3.40.50.720 IPR002020 IPR005811 IPR016102 IPR016142 IPR016143 IPR017440 IPR017866 IPR033847 IPR036291 IPR036969 PF00285 PF00549 PS00399 PS01216 PS01217 PTHR23118 PTHR23118:SF24 SSF48256 SSF51735 cd06100	24
LotjaGi6g1v0258800.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-citrate synthase, putative; TAIR: AT3G06650.1 ATP-citrate lyase B-1; Swiss-Prot: sp\|Q93VT8\|ACLB1_ORYSJ ATP-citrate synthase beta chain protein 1; TrEMBL-Plants: tr\|V7BMZ5\|V7BMZ5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0258800	Domains G3DSA:1.10.230.10 G3DSA:1.10.580.10 G3DSA:3.40.50.261 G3DSA:3.40.50.720 IPR002020 IPR005811 IPR016102 IPR016142 IPR016143 IPR017866 IPR033847 IPR036291 IPR036969 PF00285 PF00549 PS01216 PS01217 PTHR23118 PTHR23118:SF24 SSF48256 SSF51735 cd06100	22
LotjaGi6g1v0258800.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-citrate synthase, putative; TAIR: AT3G06650.1 ATP-citrate lyase B-1; Swiss-Prot: sp\|Q93VT8\|ACLB1_ORYSJ ATP-citrate synthase beta chain protein 1; TrEMBL-Plants: tr\|V7BMZ5\|V7BMZ5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0258800	Domains G3DSA:1.10.230.10 G3DSA:1.10.580.10 G3DSA:3.40.50.261 G3DSA:3.40.50.720 IPR002020 IPR005811 IPR016102 IPR016142 IPR016143 IPR017440 IPR017866 IPR033847 IPR036291 IPR036969 PF00285 PF00549 PS00399 PS01216 PS01217 PTHR23118 PTHR23118:SF24 SSF48256 SSF51735 cd06100	24

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd06100	CDD	1	7.14