Domain Predictions — View

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PS01216

Source: ProSitePatterns

Description

ATP-citrate lyase / succinyl-CoA ligases family signature 1.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 15

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v0395830.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Succinyl-CoA ligase alpha 1 subunit-like [Solanum tuberosum] gi\|78191458\|gb\|ABB29950.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.261 G3DSA:3.40.50.720 IPR005811 IPR016040 IPR016102 IPR017440 IPR033847 NON_CYTOPLASMIC_DOMAIN PF00549 PR01798 PS00399 PS01216 PTHR11117 PTHR11117:SF9 SSF51735 SSF52210 TRANSMEMBRANE	18
Lj2g3v0609720.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: probable succinyl-CoA ligase [ADP]-forming] gi\|502173227\|ref\|XP_004515280.1\|	Domains G3DSA:3.40.50.261 G3DSA:3.40.50.720 IPR003781 IPR005810 IPR005811 IPR016040 IPR016102 IPR017440 IPR033847 PF00549 PF02629 PIRSF001553 PR01798 PS00399 PS01216 PTHR11117 PTHR11117:SF9 SM00881 SSF51735 SSF52210 TIGR01019	21
Lj4g3v2265020.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: ATP-citrate synthase beta chain protein 1-like [Glycine max] gi\|356556001\|ref\|XP_003546316.1\|	Domains G3DSA:1.10.230.10 G3DSA:1.10.580.10 G3DSA:3.40.50.261 G3DSA:3.40.50.720 IPR002020 IPR005811 IPR016040 IPR016102 IPR016142 IPR016143 IPR017440 IPR017866 IPR033847 PF00285 PF00549 PS00399 PS01216 PS01217 PTHR23118 PTHR23118:SF3 SSF48256 SSF51735 cd06100	23
Lj4g3v2266260.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP citrate lyase alpha subunit [Glycyrrhiza uralensis] gi\|148872938\|gb\|ABR15094.1\|	Domains G3DSA:1.10.230.10 G3DSA:1.10.580.10 G3DSA:3.40.50.261 G3DSA:3.40.50.720 IPR002020 IPR004265 IPR005811 IPR016040 IPR016102 IPR016142 IPR016143 IPR017440 IPR017866 IPR033847 PF00285 PF00549 PF03018 PS00399 PS01216 PS01217 PTHR23118 PTHR23118:SF3 SSF48256 SSF51735 cd06100	25
Lj6g3v1915820.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: ATP-citrate synthase beta chain protein 1-like [Glycine max] gi\|356556001\|ref\|XP_003546316.1\|	Domains G3DSA:1.10.230.10 G3DSA:1.10.580.10 G3DSA:3.40.50.261 G3DSA:3.40.50.720 IPR002020 IPR005811 IPR016040 IPR016102 IPR016142 IPR016143 IPR017440 IPR017866 IPR033847 PF00285 PF00549 PS00399 PS01216 PS01217 PTHR23118 PTHR23118:SF3 SSF48256 SSF51735 cd06100	23
LotjaGi2g1v0179800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Succinate--CoA ligase [ADP]-forming] subunit alpha; TAIR: AT5G23250.1 Succinyl-CoA ligase, alpha subunit; Swiss-Prot: sp\|Q8GTQ9\|SUCA1_SOLLC Succinate--CoA ligase [ADP]-forming] subunit alpha-1, mitochondrial; TrEMBL-Plants: tr\|V7C6K2\|V7C6K2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0179800	Domains G3DSA:3.40.50.261 G3DSA:3.40.50.720 IPR003781 IPR005810 IPR005811 IPR016102 IPR017440 IPR033847 IPR036291 MF_01988 PF00549 PF02629 PIRSF001553 PR01798 PS00399 PS01216 PTHR11117 PTHR11117:SF19 SM00881 SSF51735 SSF52210 TIGR01019	22
LotjaGi4g1v0331500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-citrate synthase, putative; TAIR: AT3G06650.1 ATP-citrate lyase B-1; Swiss-Prot: sp\|Q93VT8\|ACLB1_ORYSJ ATP-citrate synthase beta chain protein 1; TrEMBL-Plants: tr\|A6MZ92\|A6MZ92_GLYUR ATP citrate lyase alpha subunit; Found in the gene: LotjaGi4g1v0331500	Domains G3DSA:1.10.230.10 G3DSA:1.10.580.10 G3DSA:3.40.50.261 G3DSA:3.40.50.720 IPR002020 IPR005811 IPR016102 IPR016142 IPR016143 IPR017440 IPR017866 IPR033847 IPR036291 IPR036969 PF00285 PF00549 PS00399 PS01216 PS01217 PTHR23118 PTHR23118:SF28 SSF48256 SSF51735 cd06100	24
LotjaGi4g1v0331500.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-citrate synthase, putative; TAIR: AT3G06650.1 ATP-citrate lyase B-1; Swiss-Prot: sp\|Q93VT8\|ACLB1_ORYSJ ATP-citrate synthase beta chain protein 1; TrEMBL-Plants: tr\|A6MZ92\|A6MZ92_GLYUR ATP citrate lyase alpha subunit; Found in the gene: LotjaGi4g1v0331500	Domains G3DSA:1.10.230.10 G3DSA:1.10.580.10 G3DSA:3.40.50.261 G3DSA:3.40.50.720 IPR002020 IPR005811 IPR016102 IPR016142 IPR016143 IPR017440 IPR017866 IPR033847 IPR036291 IPR036969 PF00285 PF00549 PS00399 PS01216 PS01217 PTHR23118 PTHR23118:SF28 SSF48256 SSF51735 cd06100	24
LotjaGi4g1v0331500.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-citrate synthase, putative; TAIR: AT3G06650.1 ATP-citrate lyase B-1; Swiss-Prot: sp\|Q93VT8\|ACLB1_ORYSJ ATP-citrate synthase beta chain protein 1; TrEMBL-Plants: tr\|A6MZ92\|A6MZ92_GLYUR ATP citrate lyase alpha subunit; Found in the gene: LotjaGi4g1v0331500	Domains G3DSA:1.10.230.10 G3DSA:3.40.50.261 G3DSA:3.40.50.720 IPR002020 IPR005811 IPR016102 IPR016143 IPR017866 IPR033847 IPR036291 IPR036969 PF00285 PF00549 PS01216 PS01217 PTHR23118 PTHR23118:SF28 SSF48256 SSF51735 cd06100	20
LotjaGi4g1v0331500.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-citrate synthase, putative; TAIR: AT3G06650.1 ATP-citrate lyase B-1; Swiss-Prot: sp\|Q93VT8\|ACLB1_ORYSJ ATP-citrate synthase beta chain protein 1; TrEMBL-Plants: tr\|A6MZ92\|A6MZ92_GLYUR ATP citrate lyase alpha subunit; Found in the gene: LotjaGi4g1v0331500	Domains G3DSA:1.10.230.10 G3DSA:1.10.580.10 G3DSA:3.40.50.261 G3DSA:3.40.50.720 IPR002020 IPR005811 IPR016102 IPR016142 IPR016143 IPR017440 IPR017866 IPR033847 IPR036291 IPR036969 PF00285 PF00549 PS00399 PS01216 PS01217 PTHR23118 PTHR23118:SF28 SSF48256 SSF51735 cd06100	24
LotjaGi6g1v0258800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-citrate synthase, putative; TAIR: AT3G06650.1 ATP-citrate lyase B-1; Swiss-Prot: sp\|Q93VT8\|ACLB1_ORYSJ ATP-citrate synthase beta chain protein 1; TrEMBL-Plants: tr\|V7BMZ5\|V7BMZ5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0258800	Domains G3DSA:1.10.230.10 G3DSA:1.10.580.10 G3DSA:3.40.50.261 G3DSA:3.40.50.720 IPR002020 IPR005811 IPR016102 IPR016142 IPR016143 IPR017440 IPR017866 IPR033847 IPR036291 IPR036969 PF00285 PF00549 PS00399 PS01216 PS01217 PTHR23118 PTHR23118:SF24 SSF48256 SSF51735 cd06100	24
LotjaGi6g1v0258800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-citrate synthase, putative; TAIR: AT3G06650.1 ATP-citrate lyase B-1; Swiss-Prot: sp\|Q93VT8\|ACLB1_ORYSJ ATP-citrate synthase beta chain protein 1; TrEMBL-Plants: tr\|V7BMZ5\|V7BMZ5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0258800	Domains G3DSA:1.10.230.10 G3DSA:1.10.580.10 G3DSA:3.40.50.261 G3DSA:3.40.50.720 IPR002020 IPR005811 IPR016102 IPR016142 IPR016143 IPR017440 IPR017866 IPR033847 IPR036291 IPR036969 PF00285 PF00549 PS00399 PS01216 PS01217 PTHR23118 PTHR23118:SF24 SSF48256 SSF51735 cd06100	24
LotjaGi6g1v0258800.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-citrate synthase, putative; TAIR: AT3G06650.1 ATP-citrate lyase B-1; Swiss-Prot: sp\|Q93VT8\|ACLB1_ORYSJ ATP-citrate synthase beta chain protein 1; TrEMBL-Plants: tr\|V7BMZ5\|V7BMZ5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0258800	Domains G3DSA:1.10.230.10 G3DSA:1.10.580.10 G3DSA:3.40.50.261 G3DSA:3.40.50.720 IPR002020 IPR005811 IPR016102 IPR016142 IPR016143 IPR017440 IPR017866 IPR033847 IPR036291 IPR036969 PF00285 PF00549 PS00399 PS01216 PS01217 PTHR23118 PTHR23118:SF24 SSF48256 SSF51735 cd06100	24
LotjaGi6g1v0258800.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-citrate synthase, putative; TAIR: AT3G06650.1 ATP-citrate lyase B-1; Swiss-Prot: sp\|Q93VT8\|ACLB1_ORYSJ ATP-citrate synthase beta chain protein 1; TrEMBL-Plants: tr\|V7BMZ5\|V7BMZ5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0258800	Domains G3DSA:1.10.230.10 G3DSA:1.10.580.10 G3DSA:3.40.50.261 G3DSA:3.40.50.720 IPR002020 IPR005811 IPR016102 IPR016142 IPR016143 IPR017866 IPR033847 IPR036291 IPR036969 PF00285 PF00549 PS01216 PS01217 PTHR23118 PTHR23118:SF24 SSF48256 SSF51735 cd06100	22
LotjaGi6g1v0258800.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-citrate synthase, putative; TAIR: AT3G06650.1 ATP-citrate lyase B-1; Swiss-Prot: sp\|Q93VT8\|ACLB1_ORYSJ ATP-citrate synthase beta chain protein 1; TrEMBL-Plants: tr\|V7BMZ5\|V7BMZ5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0258800	Domains G3DSA:1.10.230.10 G3DSA:1.10.580.10 G3DSA:3.40.50.261 G3DSA:3.40.50.720 IPR002020 IPR005811 IPR016102 IPR016142 IPR016143 IPR017440 IPR017866 IPR033847 IPR036291 IPR036969 PF00285 PF00549 PS00399 PS01216 PS01217 PTHR23118 PTHR23118:SF24 SSF48256 SSF51735 cd06100	24

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd06100	CDD	1	6.67