Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

IPR017562

Source: InterPro

Description

IPR017562 is a Cytochrome c-type biogenesis protein CcsA.

<p>The CcsA protein family represents one of two essential proteins in system II c-type cytochrome biogenesis [[cite:PUB00043064]]. Additional proteins tend to be part of the system but can often be replaced by chemical reductants such as dithiothreitol. These proteins are often named CcsB in Bordetella and some other bacteria, ResC in Bacillus (where there is additional N-terminal sequence), while chloroplast proteins are consistently named CcsA.</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0017004
Biological process Cytochrome complex assembly The aggregation, arrangement and bonding together of a cytochrome complex. A cytochrome complex is a protein complex in which at least one of the proteins is a cytochrome, i.e. a heme-containing protein involved in catalysis of redox reactions.
Subterm of

Associated Lotus transcripts 3

Transcript Name Description Predicted domains Domain count
Ljchlorog3v0013290.1
– Cytochrome c biogenesis protein [Lotus japonicus] gi|13518486|ref|NP_084844.1|
Domains
11
LotjaGi5g1v0223100.1
– Cytochrome c biogenesis protein CcsA; TAIR: ATCG01040.1 Cytochrome C assembly protein (ChrC); Swiss-Prot: sp|Q9BBP4|CCSA_LOTJA Cytochrome c biogenesis protein CcsA; TrEMBL-Plants: tr|A0A0K0LNH5|A0A0K0LNH5_WISFL Cytochrome c biogenesis protein CcsA; Found in the gene: LotjaGi5g1v0223100
Domains
11
LotjaGi5g1v0223100.2
– Cytochrome c biogenesis protein CcsA; TAIR: ATCG01040.1 Cytochrome C assembly protein (ChrC); Swiss-Prot: sp|Q9BBP4|CCSA_LOTJA Cytochrome c biogenesis protein CcsA; TrEMBL-Plants: tr|A0A0K0LNH5|A0A0K0LNH5_WISFL Cytochrome c biogenesis protein CcsA; Found in the gene: LotjaGi5g1v0223100
Domains
11

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
TRANSMEMBRANE Phobius 1 33.33